Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:28 (596329): wrapper (7.7.26015): starting
09:26:28 (596329): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 09:26:28] Arguments: --nthreads 8
[2025-10-11 09:26:28] Threads: 8
[2025-10-11 09:26:28] Checking for CVMFS
[2025-10-11 09:26:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:26:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:26:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:26:29] 2.13.2.0 891182 136706 519040 151585 1 172 32577500 32935937 47127 16776704 0 467118769 99.669 400282674 16820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:26:29] CVMFS is ok
[2025-10-11 09:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:26:29] Further information can be found at the LHC@home message board.
[2025-10-11 09:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:26:29] Checking for apptainer binary...
[2025-10-11 09:26:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:26:29] Running /usr/bin/apptainer --version
[2025-10-11 09:26:29] apptainer version 1.4.3-1.el9
[2025-10-11 09:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:26:30] c7-3-29.aglt2.org
[2025-10-11 09:26:30] apptainer works
[2025-10-11 09:26:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 09:26:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 09:26:30] Starting ATLAS job with PandaID=6837555334
[2025-10-11 09:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:33:44]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:33:44] 2025-10-11 17:32:35,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:33:44] 2025-10-11 17:32:35,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:33:44] 2025-10-11 17:32:35,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:33:44] 2025-10-11 17:32:35,591 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:33:44] 2025-10-11 17:32:35,592 | INFO     | sum of square deviations: 4286562239.733317
[2025-10-11 13:33:44] 2025-10-11 17:32:35,596 | INFO     | sum of deviations: 7411335540.200003
[2025-10-11 13:33:44] 2025-10-11 17:32:35,596 | INFO     | mean x: 1760196597.5333333
[2025-10-11 13:33:44] 2025-10-11 17:32:35,597 | INFO     | mean y: 2154387.1625
[2025-10-11 13:33:44] 2025-10-11 17:32:35,597 | INFO     | -- intersect: -3041171912.9006286
[2025-10-11 13:33:44] 2025-10-11 17:32:35,597 | INFO     | intersect: -3041171912.9006286
[2025-10-11 13:33:44] 2025-10-11 17:32:35,597 | INFO     | chi2: 1.6605805540475558
[2025-10-11 13:33:44] 2025-10-11 17:32:35,597 | INFO     | sum of square deviations: 4024167321.8467984
[2025-10-11 13:33:44] 2025-10-11 17:32:35,598 | INFO     | sum of deviations: 5784379096.361705
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | mean x: 1760196445.025532
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | mean y: 2153437.1063829786
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | -- intersect: -2527970861.359229
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | intersect: -2527970861.359229
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | chi2: 1.6569185287040062
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | current chi2=1.6569185287040062 (change=0.2205268112181363 %)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,599 | INFO     | right removable region: 234
[2025-10-11 13:33:44] 2025-10-11 17:32:35,600 | INFO     | sum of square deviations: 4024192089.727655
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | sum of deviations: -24879518145.880848
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | mean x: 1760196750.0340426
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | mean y: 2172989.485106383
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | -- intersect: 10884567767.453129
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | intersect: 10884567767.453129
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | chi2: 0.20978450486795114
[2025-10-11 13:33:44] 2025-10-11 17:32:35,601 | INFO     | current chi2=0.20978450486795114 (change=87.3667974518541 %)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,602 | INFO     | sum of square deviations: 3772752377.2217336
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | sum of deviations: -15441716159.68262
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | mean x: 1760196902.5347826
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | mean y: 2167256.6478260867
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | -- intersect: 7206578847.029069
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | intersect: 7206578847.029069
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | chi2: 0.15387227998023933
[2025-10-11 13:33:44] 2025-10-11 17:32:35,603 | INFO     | current chi2=0.15387227998023933 (change=26.652218629257558 %)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,604 | INFO     | sum of square deviations: 3532010539.7155356
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | sum of deviations: -9140332320.120005
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | mean x: 1760197055.0355556
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | mean y: 2163284.64
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | -- intersect: 4557298624.982816
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | intersect: 4557298624.982816
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | chi2: 0.12168692966191293
[2025-10-11 13:33:44] 2025-10-11 17:32:35,605 | INFO     | current chi2=0.12168692966191293 (change=20.916925597293893 %)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,606 | INFO     | left removable region: 30
[2025-10-11 13:33:44] 2025-10-11 17:32:35,606 | INFO     | sum of square deviations: 2632473242.9215846
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | sum of deviations: -3750295807.117647
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | mean x: 1760197329.5196078
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | mean y: 2157647.029411765
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | -- intersect: 2509784526.940571
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | intersect: 2509784526.940571
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | chi2: 0.10191710071783176
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | -- intersect: 2509784526.940571
[2025-10-11 13:33:44] 2025-10-11 17:32:35,607 | INFO     | current memory leak: -1.42 B/s (using 204 data points, chi2=0.10)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | could have reported an average CPU frequency of 3177 MHz (12 samples)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | ..............................
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . Timing measurements:
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . get job = 0 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . initial setup = 5 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . payload setup = 26 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . stage-in = 0 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,608 | INFO     | . payload execution = 14632 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,609 | INFO     | . stage-out = 3 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,609 | INFO     | . log creation = 0 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,609 | INFO     | ..............................
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | 
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | job summary report
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | --------------------------------------------------
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | PanDA job id: 6837555334
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | task id: 46676269
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | errors: (none)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | pilot state: finished 
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | transexitcode: 0
[2025-10-11 13:33:44] 2025-10-11 17:32:35,760 | INFO     | exeerrorcode: 0
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | exeerrordiag: 
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | exitcode: 0
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | exitmsg: OK
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | cpuconsumptiontime: 34241 s
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | nevents: 400
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | neventsw: 0
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | pid: 607882
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | pgrp: 607882
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | corecount: 8
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | event service: False
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 20: 2349174, 23: 2349202, 14661: 2380018, 14665: 2389016, 14666: 2389072, 14683: 2389266}
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | --------------------------------------------------
[2025-10-11 13:33:44] 2025-10-11 17:32:35,761 | INFO     | 
[2025-10-11 13:33:44] 2025-10-11 17:32:35,762 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 13:33:44] 2025-10-11 17:32:35,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | job 6837555334 has completed (purged errors)
[2025-10-11 13:33:44] 2025-10-11 17:32:35,793 | INFO     | overall cleanup function is called
[2025-10-11 13:33:44] 2025-10-11 17:32:36,807 | INFO     | --- collectZombieJob: --- 10, [607882]
[2025-10-11 13:33:44] 2025-10-11 17:32:36,807 | INFO     | zombie collector waiting for pid 607882
[2025-10-11 13:33:44] 2025-10-11 17:32:36,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:33:44] 2025-10-11 17:32:36,807 | INFO     | collected zombie processes
[2025-10-11 13:33:44] 2025-10-11 17:32:36,807 | INFO     | will attempt to kill all subprocesses of pid=607882
[2025-10-11 13:33:44] 2025-10-11 17:32:37,625 | INFO     | process IDs to be killed: [607882] (in reverse order)
[2025-10-11 13:33:44] 2025-10-11 17:32:37,906 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:33:44] 2025-10-11 17:32:37,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:33:44] 2025-10-11 17:32:37,947 | INFO     | did not find any defunct processes belonging to 607882
[2025-10-11 13:33:44] 2025-10-11 17:32:37,972 | INFO     | did not find any defunct processes belonging to 607882
[2025-10-11 13:33:44] 2025-10-11 17:32:37,972 | INFO     | ready for new job
[2025-10-11 13:33:44] 2025-10-11 17:32:37,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:33:44] 2025-10-11 17:32:37,974 | INFO     | ***************************************
[2025-10-11 13:33:44] 2025-10-11 17:32:37,974 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:33:44] 2025-10-11 17:32:37,974 | INFO     | ***************************************
[2025-10-11 13:33:44] 2025-10-11 17:32:37,974 | INFO     | 
[2025-10-11 13:33:44] 2025-10-11 17:32:37,992 | INFO     | architecture information:
[2025-10-11 13:33:44] 2025-10-11 17:32:37,993 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:33:44] 2025-10-11 17:32:38,012 | INFO     | cat /etc/os-release:
[2025-10-11 13:33:44] NAME="CentOS Linux"
[2025-10-11 13:33:44] VERSION="7 (Core)"
[2025-10-11 13:33:44] ID="centos"
[2025-10-11 13:33:44] ID_LIKE="rhel fedora"
[2025-10-11 13:33:44] VERSION_ID="7"
[2025-10-11 13:33:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:33:44] ANSI_COLOR="0;31"
[2025-10-11 13:33:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:33:44] HOME_URL="https://www.centos.org/"
[2025-10-11 13:33:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:33:44] 
[2025-10-11 13:33:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:33:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:33:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:33:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:33:44] 
[2025-10-11 13:33:44] 2025-10-11 17:32:38,013 | INFO     | ***************************************
[2025-10-11 13:33:44] 2025-10-11 17:32:38,515 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | INFO     | sufficient remaining disk space (74200383488 B)
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | INFO     | update_server=False
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:33:44] 2025-10-11 17:32:38,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:33:44] 2025-10-11 17:32:38,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:33:44] 2025-10-11 17:32:38,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:33:44] 2025-10-11 17:32:38,824 | INFO     | aborting loop
[2025-10-11 13:33:44] 2025-10-11 17:32:39,036 | INFO     | all data control threads have been joined
[2025-10-11 13:33:44] 2025-10-11 17:32:39,148 | INFO     | all payload control threads have been joined
[2025-10-11 13:33:44] 2025-10-11 17:32:39,359 | INFO     | all job control threads have been joined
[2025-10-11 13:33:44] 2025-10-11 17:32:39,593 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,642 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,642 | INFO     | [job] validate thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,644 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,707 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,830 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:39,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,003 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,045 | INFO     | [data] control thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,154 | INFO     | [payload] control thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,219 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,365 | INFO     | [job] control thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,599 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:40,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:33:44] 2025-10-11 17:32:40,922 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:41,711 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:32:42,601 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:33:44] 2025-10-11 17:33:07,809 | INFO     | PID=600298 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 13:33:44] 2025-10-11 17:33:07,814 | INFO     | .. there are 58 such processes running
[2025-10-11 13:33:44] 2025-10-11 17:33:07,814 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:33:44] 2025-10-11 17:33:07,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:33:44] 2025-10-11 17:33:07,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:33:44] 2025-10-11 17:33:38,499 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:33:44] 2025-10-11 17:33:38,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701106739008)>', '<ExcThread(monitor, started 139700748658432)>']
[2025-10-11 13:33:44] 2025-10-11 17:33:39,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:33:44] 2025-10-11 17:33:39,003 | INFO     | [monitor] control thread has ended
[2025-10-11 13:33:44] 2025-10-11 17:33:43,807 | INFO     | all workflow threads have been joined
[2025-10-11 13:33:44] 2025-10-11 17:33:43,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:33:44] 2025-10-11 17:33:43,807 | INFO     | traces error code: 0
[2025-10-11 13:33:44] 2025-10-11 17:33:43,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:33:44] 2025-10-11 17:33:44,206 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:33:44] 2025-10-11 17:33:44,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:33:44] 2025-10-11 17:33:44,245 [wrapper] pilotpid: 600298
[2025-10-11 13:33:44] 2025-10-11 17:33:44,291 [wrapper] Pilot exit status: 0
[2025-10-11 13:33:44] 2025-10-11 17:33:44,325 [wrapper] pandaids: 6837555334
[2025-10-11 13:33:44] 2025-10-11 17:33:44,533 [wrapper] cleanup supervisor_pilot 1766520 600299
[2025-10-11 13:33:44] 2025-10-11 17:33:44,541 [wrapper] Test setup, not cleaning
[2025-10-11 13:33:44] 2025-10-11 17:33:44,545 [wrapper] apfmon messages muted
[2025-10-11 13:33:44] 2025-10-11 17:33:44,547 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:33:44] 2025-10-11 17:33:44,549 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:33:44]  *** Error codes and diagnostics ***
[2025-10-11 13:33:44]     "exeErrorCode": 0,
[2025-10-11 13:33:44]     "exeErrorDiag": "",
[2025-10-11 13:33:44]     "pilotErrorCode": 0,
[2025-10-11 13:33:44]     "pilotErrorDiag": "",
[2025-10-11 13:33:44]  *** Listing of results directory ***
[2025-10-11 13:33:44] total 412096
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 05:06 pilot3.tar.gz
[2025-10-11 13:33:44] -rwx------. 1 boincer umatlas     36292 Oct 10 05:17 runpilot2-wrapper.sh
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 05:17 queuedata.json
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas       100 Oct 11 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:33:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 09:26 run_atlas
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas       105 Oct 11 09:26 job.xml
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas 220743328 Oct 11 09:26 EVNT.46676267._001458.pool.root.1
[2025-10-11 13:33:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 09:26 shared
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 09:26 input.tar.gz
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:26 start_atlas.sh
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas         0 Oct 11 09:26 boinc_lockfile
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 09:26 pandaJob.out
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas    975520 Oct 11 09:27 agis_schedconf.cvmfs.json
[2025-10-11 13:33:44] drwx------. 5 boincer umatlas      4096 Oct 11 09:27 pilot3
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas 192873360 Oct 11 13:31 HITS.46676269._035882.pool.root.1
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas       530 Oct 11 13:31 boinc_task_state.xml
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas      6936 Oct 11 13:31 init_data.xml
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas      1046 Oct 11 13:32 memory_monitor_summary.json
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas        95 Oct 11 13:32 pilot_heartbeat.json
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:32 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas    482839 Oct 11 13:32 log.46676269._035882.job.log.tgz.1
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas      7803 Oct 11 13:32 heartbeat.json
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas        28 Oct 11 13:33 wrapper_checkpoint.txt
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas      4823 Oct 11 13:33 pilotlog.txt
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas   1750617 Oct 11 13:33 log.46676269._035882.job.log.1
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas       357 Oct 11 13:33 output.list
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:33 runtime_log
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas   2252800 Oct 11 13:33 result.tar.gz
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas       657 Oct 11 13:33 Z4uNDmXQOR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEhPMDmdqopKn.diag
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 13:33 runtime_log.err
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:33 boinc_mmap_file
[2025-10-11 13:33:44] -rw-r--r--. 1 boincer umatlas     20983 Oct 11 13:33 stderr.txt
[2025-10-11 13:33:44] HITS file was successfully produced:
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas 192873360 Oct 11 13:31 shared/HITS.pool.root.1
[2025-10-11 13:33:44]  *** Contents of shared directory: ***
[2025-10-11 13:33:44] total 406708
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas 220743328 Oct 11 09:26 ATLAS.root_0
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 09:26 input.tar.gz
[2025-10-11 13:33:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:26 start_atlas.sh
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas 192873360 Oct 11 13:31 HITS.pool.root.1
[2025-10-11 13:33:44] -rw-------. 1 boincer umatlas   2252800 Oct 11 13:33 result.tar.gz
13:33:45 (596329): run_atlas exited; CPU time 34927.693737
13:33:45 (596329): called boinc_finish(0)

</stderr_txt>
]]>

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