Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:03 (18613): wrapper (7.7.26015): starting
13:47:03 (18613): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 13:47:03] Arguments: --nthreads 6
[2025-10-14 13:47:03] Threads: 6
[2025-10-14 13:47:03] Checking for CVMFS
[2025-10-14 13:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 13:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 13:47:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 13:47:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 13:47:04] 2.13.1.0 3910062 508 61216 151685 2 57 30780732 52428800 922 130560 0 930213 99.993 22627 145 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 13:47:04] CVMFS is ok
[2025-10-14 13:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 13:47:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 13:47:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 13:47:04] Further information can be found at the LHC@home message board.
[2025-10-14 13:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 13:47:04] Checking for apptainer binary...
[2025-10-14 13:47:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 13:47:04] Running /usr/bin/apptainer --version
[2025-10-14 13:47:04] apptainer version 1.4.1-1.el9
[2025-10-14 13:47:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 13:47:04] Atto003
[2025-10-14 13:47:04] apptainer works
[2025-10-14 13:47:04] Set ATHENA_PROC_NUMBER=6
[2025-10-14 13:47:04] Set ATHENA_CORE_NUMBER=6
[2025-10-14 13:47:04] Starting ATLAS job with PandaID=6838068458
[2025-10-14 13:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 15:03:25]  *** The last 200 lines of the pilot log: ***
[2025-10-14 15:03:25] 2025-10-14 06:02:19,980 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838068458/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 15:03:25] 2025-10-14 06:02:20,024 | INFO     | number of running child processes to parent process 29232: 1
[2025-10-14 15:03:25] 2025-10-14 06:02:20,024 | INFO     | maximum number of monitored processes: 6
[2025-10-14 15:03:25] 2025-10-14 06:02:20,319 | INFO     | time since job start (4508s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:20,319 | INFO     | 4512s have passed since pilot start - server update state is 'RUNNING'
[2025-10-14 15:03:25] 2025-10-14 06:02:21,714 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 15:03:25] 2025-10-14 06:02:22,324 | INFO     | time since job start (4510s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:22,527 | INFO     | monitor loop #340: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:22,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:23,385 | INFO     | PID=22440 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 15:03:25] 2025-10-14 06:02:23,385 | INFO     | .. there are 2 such processes running
[2025-10-14 15:03:25] 2025-10-14 06:02:24,385 | INFO     | time since job start (4512s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:24,505 | INFO     | job 6838068458 has state=finished
[2025-10-14 15:03:25] 2025-10-14 06:02:24,505 | INFO     | preparing for final server update for job 6838068458 in state='finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:24,505 | INFO     | this job has now completed (state=finished)
[2025-10-14 15:03:25] 2025-10-14 06:02:24,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 15:03:25] 2025-10-14 06:02:24,506 | INFO     | log transfer has been attempted: DONE
[2025-10-14 15:03:25] 2025-10-14 06:02:24,506 | INFO     | job 6838068458 has finished - writing final server update
[2025-10-14 15:03:25] 2025-10-14 06:02:24,506 | INFO     | total number of processed events: 400 (read)
[2025-10-14 15:03:25] 2025-10-14 06:02:24,507 | INFO     | executing command: lscpu
[2025-10-14 15:03:25] 2025-10-14 06:02:24,519 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 15:03:25] 2025-10-14 06:02:25,030 | INFO     | monitor loop #341: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:25,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:26,391 | INFO     | time since job start (4514s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:27,533 | INFO     | monitor loop #342: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:27,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:28,395 | INFO     | time since job start (4516s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:30,036 | INFO     | monitor loop #343: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:30,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:30,400 | INFO     | time since job start (4518s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:32,406 | INFO     | time since job start (4520s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:32,539 | INFO     | monitor loop #344: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:32,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:34,411 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:35,042 | INFO     | monitor loop #345: job 0:6838068458 is in state 'finished'
[2025-10-14 15:03:25] 2025-10-14 06:02:35,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,416 | INFO     | time since job start (4524s) is within the limit (172800.0s)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,492 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 15:03:25] 2025-10-14 06:02:36,494 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3899.9825624999994
[2025-10-14 15:03:25] 2025-10-14 06:02:36,496 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838068458/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,496 | INFO     | extracted standard info from prmon json
[2025-10-14 15:03:25] 2025-10-14 06:02:36,497 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 15:03:25] 2025-10-14 06:02:36,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 15:03:25] 2025-10-14 06:02:36,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 15:03:25] 2025-10-14 06:02:36,497 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 15:03:25] 2025-10-14 06:02:36,498 | INFO     | fitting pss+swap vs Time
[2025-10-14 15:03:25] 2025-10-14 06:02:36,498 | INFO     | sum of square deviations: 93236929.761194
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | sum of deviations: -5528601708.850745
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | mean x: 1760419568.0597014
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | mean y: 2529658.462686567
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | -- intersect: 104388835140.60622
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | intersect: 104388835140.60622
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | chi2: 0.028741158407276684
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | -- intersect: 104388835140.60622
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | current memory leak: -59.30 B/s (using 67 data points, chi2=0.03)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,499 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | ..............................
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . Timing measurements:
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . get job = 0 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . initial setup = 4 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . payload setup = 2 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . stage-in = 0 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . payload execution = 4486 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . stage-out = 0 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | . log creation = 0 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,500 | INFO     | ..............................
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | 
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | job summary report
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | --------------------------------------------------
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | PanDA job id: 6838068458
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | task id: 46676269
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | errors: (none)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | pilot state: finished 
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | transexitcode: 0
[2025-10-14 15:03:25] 2025-10-14 06:02:36,553 | INFO     | exeerrorcode: 0
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | exeerrordiag: 
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | exitcode: 0
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | exitmsg: OK
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | cpuconsumptiontime: 24821 s
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | nevents: 400
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | neventsw: 0
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | pid: 29232
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | pgrp: 29232
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | corecount: 6
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | event service: False
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4492: 2375343, 4493: 2384341, 4496: 2384397, 4511: 2384719}
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | --------------------------------------------------
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | 
[2025-10-14 15:03:25] 2025-10-14 06:02:36,554 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | job 6838068458 has completed (purged errors)
[2025-10-14 15:03:25] 2025-10-14 06:02:36,566 | INFO     | overall cleanup function is called
[2025-10-14 15:03:25] 2025-10-14 06:02:37,573 | INFO     | --- collectZombieJob: --- 10, [29232]
[2025-10-14 15:03:25] 2025-10-14 06:02:37,573 | INFO     | zombie collector waiting for pid 29232
[2025-10-14 15:03:25] 2025-10-14 06:02:37,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 15:03:25] 2025-10-14 06:02:37,573 | INFO     | collected zombie processes
[2025-10-14 15:03:25] 2025-10-14 06:02:37,573 | INFO     | will attempt to kill all subprocesses of pid=29232
[2025-10-14 15:03:25] 2025-10-14 06:02:37,642 | INFO     | process IDs to be killed: [29232] (in reverse order)
[2025-10-14 15:03:25] 2025-10-14 06:02:37,666 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 15:03:25] 2025-10-14 06:02:37,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 15:03:25] 2025-10-14 06:02:37,669 | INFO     | did not find any defunct processes belonging to 29232
[2025-10-14 15:03:25] 2025-10-14 06:02:37,671 | INFO     | did not find any defunct processes belonging to 29232
[2025-10-14 15:03:25] 2025-10-14 06:02:37,671 | INFO     | ready for new job
[2025-10-14 15:03:25] 2025-10-14 06:02:37,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 15:03:25] 2025-10-14 06:02:37,672 | INFO     | ***************************************
[2025-10-14 15:03:25] 2025-10-14 06:02:37,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 15:03:25] 2025-10-14 06:02:37,672 | INFO     | ***************************************
[2025-10-14 15:03:25] 2025-10-14 06:02:37,672 | INFO     | 
[2025-10-14 15:03:25] 2025-10-14 06:02:37,673 | INFO     | architecture information:
[2025-10-14 15:03:25] 2025-10-14 06:02:37,673 | INFO     | executing command: cat /etc/os-release
[2025-10-14 15:03:25] 2025-10-14 06:02:37,679 | INFO     | cat /etc/os-release:
[2025-10-14 15:03:25] NAME="CentOS Linux"
[2025-10-14 15:03:25] VERSION="7 (Core)"
[2025-10-14 15:03:25] ID="centos"
[2025-10-14 15:03:25] ID_LIKE="rhel fedora"
[2025-10-14 15:03:25] VERSION_ID="7"
[2025-10-14 15:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 15:03:25] ANSI_COLOR="0;31"
[2025-10-14 15:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 15:03:25] HOME_URL="https://www.centos.org/"
[2025-10-14 15:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 15:03:25] 
[2025-10-14 15:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 15:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 15:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 15:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 15:03:25] 
[2025-10-14 15:03:25] 2025-10-14 06:02:37,679 | INFO     | ***************************************
[2025-10-14 15:03:25] 2025-10-14 06:02:38,182 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | INFO     | sufficient remaining disk space (111057829888 B)
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | INFO     | update_server=False
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 15:03:25] 2025-10-14 06:02:38,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 15:03:25] 2025-10-14 06:02:38,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 15:03:25] 2025-10-14 06:02:38,550 | INFO     | aborting loop
[2025-10-14 15:03:25] 2025-10-14 06:02:38,564 | INFO     | all payload control threads have been joined
[2025-10-14 15:03:25] 2025-10-14 06:02:38,825 | INFO     | all data control threads have been joined
[2025-10-14 15:03:25] 2025-10-14 06:02:38,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 15:03:25] 2025-10-14 06:02:38,943 | INFO     | all job control threads have been joined
[2025-10-14 15:03:25] 2025-10-14 06:02:39,196 | INFO     | [job] retrieve thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,197 | INFO     | [job] queue monitor thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,308 | INFO     | [data] copytool_in thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,461 | INFO     | [payload] validate_post thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,556 | INFO     | [job] job monitor thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,569 | INFO     | [payload] control thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,830 | INFO     | [data] control thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,862 | INFO     | [payload] failed_post thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:39,948 | INFO     | [job] control thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:40,266 | INFO     | [job] validate thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:40,359 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:40,523 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:40,841 | INFO     | [data] copytool_out thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:02:41,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 15:03:25] 2025-10-14 06:02:45,266 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 15:03:25] 2025-10-14 06:03:19,007 | INFO     | [monitor] cgroup control has ended
[2025-10-14 15:03:25] 2025-10-14 06:03:20,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301416773440)>', '<ExcThread(monitor, started 140300911621888)>']
[2025-10-14 15:03:25] 2025-10-14 06:03:21,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 15:03:25] 2025-10-14 06:03:21,395 | INFO     | [monitor] control thread has ended
[2025-10-14 15:03:25] 2025-10-14 06:03:25,740 | INFO     | all workflow threads have been joined
[2025-10-14 15:03:25] 2025-10-14 06:03:25,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 15:03:25] 2025-10-14 06:03:25,740 | INFO     | traces error code: 0
[2025-10-14 15:03:25] 2025-10-14 06:03:25,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 15:03:25] 2025-10-14 06:03:25,787 [wrapper] ==== pilot stdout END ====
[2025-10-14 15:03:25] 2025-10-14 06:03:25,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 15:03:25] 2025-10-14 06:03:25,788 [wrapper] pilotpid: 22440
[2025-10-14 15:03:25] 2025-10-14 06:03:25,789 [wrapper] Pilot exit status: 0
[2025-10-14 15:03:25] 2025-10-14 06:03:25,793 [wrapper] pandaids: 6838068458
[2025-10-14 15:03:25] 2025-10-14 06:03:25,804 [wrapper] cleanup supervisor_pilot   66234 22441
[2025-10-14 15:03:25] 2025-10-14 06:03:25,805 [wrapper] Test setup, not cleaning
[2025-10-14 15:03:25] 2025-10-14 06:03:25,806 [wrapper] apfmon messages muted
[2025-10-14 15:03:25] 2025-10-14 06:03:25,807 [wrapper] ==== wrapper stdout END ====
[2025-10-14 15:03:25] 2025-10-14 06:03:25,808 [wrapper] ==== wrapper stderr END ====
[2025-10-14 15:03:25]  *** Error codes and diagnostics ***
[2025-10-14 15:03:25]     "exeErrorCode": 0,
[2025-10-14 15:03:25]     "exeErrorDiag": "",
[2025-10-14 15:03:25]     "pilotErrorCode": 0,
[2025-10-14 15:03:25]     "pilotErrorDiag": "",
[2025-10-14 15:03:25]  *** Listing of results directory ***
[2025-10-14 15:03:25] total 412248
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc    557409 Oct 11 12:42 pilot3.tar.gz
[2025-10-14 15:03:25] -rwx------. 1 boinc boinc     36292 Oct 11 13:12 runpilot2-wrapper.sh
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc      5112 Oct 11 13:12 queuedata.json
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc       100 Oct 14 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 15:03:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 13:47 run_atlas
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc       105 Oct 14 13:47 job.xml
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc      9345 Oct 14 13:47 init_data.xml
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc 220822638 Oct 14 13:47 EVNT.46676267._002065.pool.root.1
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc     15120 Oct 14 13:47 start_atlas.sh
[2025-10-14 15:03:25] drwxrwx--x. 2 boinc boinc        68 Oct 14 13:47 shared
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc    569677 Oct 14 13:47 input.tar.gz
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc         0 Oct 14 13:47 boinc_lockfile
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc      2550 Oct 14 13:47 pandaJob.out
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc    972807 Oct 14 13:47 agis_schedconf.cvmfs.json
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc   1560580 Oct 14 13:47 agis_ddmendpoints.agis.ALL.json
[2025-10-14 15:03:25] drwx------. 5 boinc boinc      4096 Oct 14 13:47 pilot3
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc        95 Oct 14 15:01 pilot_heartbeat.json
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc 195478252 Oct 14 15:01 HITS.46676269._051337.pool.root.1
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc       529 Oct 14 15:02 boinc_task_state.xml
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc      1016 Oct 14 15:02 memory_monitor_summary.json
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc    305405 Oct 14 15:02 log.46676269._051337.job.log.tgz.1
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc      7772 Oct 14 15:02 heartbeat.json
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc      8192 Oct 14 15:03 boinc_mmap_file
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc        27 Oct 14 15:03 wrapper_checkpoint.txt
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc      4553 Oct 14 15:03 pilotlog.txt
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc    671537 Oct 14 15:03 log.46676269._051337.job.log.1
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc       357 Oct 14 15:03 output.list
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc       620 Oct 14 15:03 runtime_log
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc    993280 Oct 14 15:03 result.tar.gz
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc      8651 Oct 14 15:03 runtime_log.err
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc       638 Oct 14 15:03 5OTLDms8fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWARMDmVzGBXo.diag
[2025-10-14 15:03:25] -rw-r--r--. 1 boinc boinc     22259 Oct 14 15:03 stderr.txt
[2025-10-14 15:03:25] HITS file was successfully produced:
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc 195478252 Oct 14 15:01 shared/HITS.pool.root.1
[2025-10-14 15:03:25]  *** Contents of shared directory: ***
[2025-10-14 15:03:25] total 408096
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc 220822638 Oct 14 13:47 ATLAS.root_0
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc     15120 Oct 14 13:47 start_atlas.sh
[2025-10-14 15:03:25] -rw-r--r--. 2 boinc boinc    569677 Oct 14 13:47 input.tar.gz
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc 195478252 Oct 14 15:01 HITS.pool.root.1
[2025-10-14 15:03:25] -rw-------. 1 boinc boinc    993280 Oct 14 15:03 result.tar.gz
15:03:27 (18613): run_atlas exited; CPU time 24872.029074
15:03:27 (18613): called boinc_finish(0)

</stderr_txt>
]]>

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