Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:10 (393899): wrapper (7.7.26015): starting
20:06:10 (393899): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:06:10] Arguments: --nthreads 4
[2025-10-11 20:06:10] Threads: 4
[2025-10-11 20:06:10] Checking for CVMFS
[2025-10-11 20:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:06:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:06:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:06:11] 2.9.2.0 3054 1027 88264 151592 2 56 21859729 36864000 0 130560 0 1030558 99.993 34879 1149 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 20:06:11] CVMFS is ok
[2025-10-11 20:06:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:06:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:06:11] Further information can be found at the LHC@home message board.
[2025-10-11 20:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:06:11] Checking for apptainer binary...
[2025-10-11 20:06:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:06:11] Running /usr/bin/apptainer --version
[2025-10-11 20:06:11] apptainer version 1.4.1-1.1
[2025-10-11 20:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:06:11] belleA263a
[2025-10-11 20:06:11] apptainer works
[2025-10-11 20:06:11] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:06:11] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:06:11] Starting ATLAS job with PandaID=6838063776
[2025-10-11 20:06:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:21:29]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:21:29]  scope=mc23_13p6TeV
[2025-10-11 21:21:29]  status=None
[2025-10-11 21:21:29]  status_code=0
[2025-10-11 21:21:29]  storage_token=
[2025-10-11 21:21:29]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838063776/log.46676269._050653.job.log.tgz.1
[2025-10-11 21:21:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/dc/log.46676269._050653.job.log.tgz.1
[2025-10-11 21:21:29]  workdir=None
[2025-10-11 21:21:29] ]
[2025-10-11 21:21:29] 2025-10-11 19:20:48,784 | INFO     | transferring file log.46676269._050653.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838063776/log.46676269._050653.job.log.tgz.1 to /local/data/boinc/
[2025-10-11 21:21:29] 2025-10-11 19:20:48,784 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838063776/log.46676269._050653.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0506
[2025-10-11 21:21:29] 2025-10-11 19:20:48,803 | INFO     | adding to output.list: log.46676269._050653.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/dc/log.46676269._050653.job.log.tg
[2025-10-11 21:21:29] 2025-10-11 19:20:48,804 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 21:21:29] 2025-10-11 19:20:48,804 | INFO     | summary of transferred files:
[2025-10-11 21:21:29] 2025-10-11 19:20:48,804 | INFO     |  -- lfn=log.46676269._050653.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 21:21:29] 2025-10-11 19:20:48,804 | INFO     | stage-out finished correctly
[2025-10-11 21:21:29] 2025-10-11 19:20:48,843 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 21:21:29] 2025-10-11 19:20:50,383 | INFO     | time since job start (4471s) is within the limit (172800.0s)
[2025-10-11 21:21:29] 2025-10-11 19:20:50,979 | INFO     | monitor loop #344: job 0:6838063776 is in state 'finished'
[2025-10-11 21:21:29] 2025-10-11 19:20:50,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:21:29] 2025-10-11 19:20:51,798 | INFO     | job 6838063776 has state=finished
[2025-10-11 21:21:29] 2025-10-11 19:20:51,798 | INFO     | preparing for final server update for job 6838063776 in state='finished'
[2025-10-11 21:21:29] 2025-10-11 19:20:51,798 | INFO     | this job has now completed (state=finished)
[2025-10-11 21:21:29] 2025-10-11 19:20:51,798 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 21:21:29] 2025-10-11 19:20:51,798 | INFO     | log transfer has been attempted: DONE
[2025-10-11 21:21:29] 2025-10-11 19:20:51,799 | INFO     | job 6838063776 has finished - writing final server update
[2025-10-11 21:21:29] 2025-10-11 19:20:51,799 | INFO     | total number of processed events: 400 (read)
[2025-10-11 21:21:29] 2025-10-11 19:20:51,799 | INFO     | executing command: lscpu
[2025-10-11 21:21:29] 2025-10-11 19:20:51,821 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 21:21:29] 2025-10-11 19:20:52,389 | INFO     | time since job start (4473s) is within the limit (172800.0s)
[2025-10-11 21:21:29] 2025-10-11 19:20:53,482 | INFO     | monitor loop #345: job 0:6838063776 is in state 'finished'
[2025-10-11 21:21:29] 2025-10-11 19:20:53,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:21:29] 2025-10-11 19:20:54,395 | INFO     | time since job start (4475s) is within the limit (172800.0s)
[2025-10-11 21:21:29] 2025-10-11 19:20:55,986 | INFO     | monitor loop #346: job 0:6838063776 is in state 'finished'
[2025-10-11 21:21:29] 2025-10-11 19:20:55,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:21:29] 2025-10-11 19:20:56,401 | INFO     | time since job start (4477s) is within the limit (172800.0s)
[2025-10-11 21:21:29] 2025-10-11 19:20:56,944 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 21:21:29] 2025-10-11 19:20:56,945 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3307.4112499999997
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838063776/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | INFO     | extracted standard info from prmon json
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:21:29] 2025-10-11 19:20:56,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | sum of square deviations: 89127252.5
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | sum of deviations: -93302672.00000006
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | mean x: 1760208289.5
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | mean y: 2419499.393939394
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | -- intersect: 1845089749.8529632
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | intersect: 1845089749.8529632
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | chi2: 0.02173401025800508
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | -- intersect: 1845089749.8529632
[2025-10-11 21:21:29] 2025-10-11 19:20:56,948 | INFO     | current memory leak: -1.05 B/s (using 66 data points, chi2=0.02)
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | could have reported an average CPU frequency of 3594 MHz (6 samples)
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | ..............................
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . Timing measurements:
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . get job = 0 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . initial setup = 1 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . payload setup = 4 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . stage-in = 0 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . payload execution = 4447 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . stage-out = 0 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | . log creation = 0 s
[2025-10-11 21:21:29] 2025-10-11 19:20:56,949 | INFO     | ..............................
[2025-10-11 21:21:29] 2025-10-11 19:20:57,441 | INFO     | 
[2025-10-11 21:21:29] 2025-10-11 19:20:57,441 | INFO     | job summary report
[2025-10-11 21:21:29] 2025-10-11 19:20:57,441 | INFO     | --------------------------------------------------
[2025-10-11 21:21:29] 2025-10-11 19:20:57,441 | INFO     | PanDA job id: 6838063776
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | task id: 46676269
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | errors: (none)
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | pilot state: finished 
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | transexitcode: 0
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | exeerrorcode: 0
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | exeerrordiag: 
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | exitcode: 0
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | exitmsg: OK
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | cpuconsumptiontime: 16742 s
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | nevents: 400
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | neventsw: 0
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | pid: 404274
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | pgrp: 404274
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | corecount: 4
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | event service: False
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | sizes: {0: 2348689, 1: 2348888, 4: 2349150, 11: 2349178, 4454: 2375425, 4455: 2384613, 4463: 2384751}
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | --------------------------------------------------
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | 
[2025-10-11 21:21:29] 2025-10-11 19:20:57,442 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 21:21:29] 2025-10-11 19:20:57,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | job 6838063776 has completed (purged errors)
[2025-10-11 21:21:29] 2025-10-11 19:20:57,464 | INFO     | overall cleanup function is called
[2025-10-11 21:21:29] 2025-10-11 19:20:58,471 | INFO     | --- collectZombieJob: --- 10, [404274]
[2025-10-11 21:21:29] 2025-10-11 19:20:58,471 | INFO     | zombie collector waiting for pid 404274
[2025-10-11 21:21:29] 2025-10-11 19:20:58,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:21:29] 2025-10-11 19:20:58,471 | INFO     | collected zombie processes
[2025-10-11 21:21:29] 2025-10-11 19:20:58,472 | INFO     | will attempt to kill all subprocesses of pid=404274
[2025-10-11 21:21:29] 2025-10-11 19:20:58,515 | INFO     | process IDs to be killed: [404274] (in reverse order)
[2025-10-11 21:21:29] 2025-10-11 19:20:58,548 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:21:29] 2025-10-11 19:20:58,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:21:29] 2025-10-11 19:20:58,550 | INFO     | did not find any defunct processes belonging to 404274
[2025-10-11 21:21:29] 2025-10-11 19:20:58,551 | INFO     | did not find any defunct processes belonging to 404274
[2025-10-11 21:21:29] 2025-10-11 19:20:58,551 | INFO     | ready for new job
[2025-10-11 21:21:29] 2025-10-11 19:20:58,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:21:29] 2025-10-11 19:20:58,552 | INFO     | ***************************************
[2025-10-11 21:21:29] 2025-10-11 19:20:58,552 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:21:29] 2025-10-11 19:20:58,552 | INFO     | ***************************************
[2025-10-11 21:21:29] 2025-10-11 19:20:58,552 | INFO     | 
[2025-10-11 21:21:29] 2025-10-11 19:20:58,553 | INFO     | architecture information:
[2025-10-11 21:21:29] 2025-10-11 19:20:58,553 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:21:29] 2025-10-11 19:20:58,567 | INFO     | cat /etc/os-release:
[2025-10-11 21:21:29] NAME="CentOS Linux"
[2025-10-11 21:21:29] VERSION="7 (Core)"
[2025-10-11 21:21:29] ID="centos"
[2025-10-11 21:21:29] ID_LIKE="rhel fedora"
[2025-10-11 21:21:29] VERSION_ID="7"
[2025-10-11 21:21:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:21:29] ANSI_COLOR="0;31"
[2025-10-11 21:21:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:21:29] HOME_URL="https://www.centos.org/"
[2025-10-11 21:21:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:21:29] 
[2025-10-11 21:21:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:21:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:21:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:21:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:21:29] 
[2025-10-11 21:21:29] 2025-10-11 19:20:58,567 | INFO     | ***************************************
[2025-10-11 21:21:29] 2025-10-11 19:20:59,070 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 21:21:29] 2025-10-11 19:20:59,088 | INFO     | sufficient remaining disk space (337916198912 B)
[2025-10-11 21:21:29] 2025-10-11 19:20:59,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:21:29] 2025-10-11 19:20:59,088 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:21:29] 2025-10-11 19:20:59,088 | INFO     | update_server=False
[2025-10-11 21:21:29] 2025-10-11 19:20:59,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:21:29] 2025-10-11 19:20:59,147 | INFO     | all job control threads have been joined
[2025-10-11 21:21:29] 2025-10-11 19:20:59,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:21:29] 2025-10-11 19:20:59,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:21:29] 2025-10-11 19:20:59,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:21:29] 2025-10-11 19:20:59,498 | INFO     | aborting loop
[2025-10-11 21:21:29] 2025-10-11 19:20:59,562 | INFO     | all data control threads have been joined
[2025-10-11 21:21:29] 2025-10-11 19:20:59,706 | INFO     | all payload control threads have been joined
[2025-10-11 21:21:29] 2025-10-11 19:21:00,094 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,150 | INFO     | [job] control thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,251 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,504 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,557 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,568 | INFO     | [data] control thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,709 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,712 | INFO     | [payload] control thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:00,981 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:01,311 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:01,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:01,364 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:01,591 | INFO     | [job] validate thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:02,001 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:21:29] 2025-10-11 19:21:03,006 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:03,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:21:29] 2025-10-11 19:21:17,597 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-11 21:21:29] 2025-10-11 19:21:23,933 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:21:29] 2025-10-11 19:21:24,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575238489920)>', '<ExcThread(monitor, started 140574447351552)>']
[2025-10-11 21:21:29] 2025-10-11 19:21:29,213 | INFO     | all workflow threads have been joined
[2025-10-11 21:21:29] 2025-10-11 19:21:29,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:21:29] 2025-10-11 19:21:29,214 | INFO     | traces error code: 0
[2025-10-11 21:21:29] 2025-10-11 19:21:29,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:21:29] 2025-10-11 19:21:29,529 | INFO     | PID=397699 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:21:29] 2025-10-11 19:21:29,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:21:29] 2025-10-11 19:21:29,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:21:29] 2025-10-11 19:21:29,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:21:29] 2025-10-11 19:21:29,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:21:29] 2025-10-11 19:21:29,530 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 21:21:29] 2025-10-11 19:21:29,530 | INFO     | [monitor] control thread has ended
[2025-10-11 21:21:29] 2025-10-11 19:21:29,605 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:21:29] 2025-10-11 19:21:29,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:21:29] 2025-10-11 19:21:29,613 [wrapper] pilotpid: 397699
[2025-10-11 21:21:29] 2025-10-11 19:21:29,617 [wrapper] Pilot exit status: 0
[2025-10-11 21:21:29] 2025-10-11 19:21:29,629 [wrapper] pandaids: 6838063776
[2025-10-11 21:21:29] 2025-10-11 19:21:29,651 [wrapper] cleanup supervisor_pilot  419110 397700
[2025-10-11 21:21:29] 2025-10-11 19:21:29,654 [wrapper] Test setup, not cleaning
[2025-10-11 21:21:29] 2025-10-11 19:21:29,658 [wrapper] apfmon messages muted
[2025-10-11 21:21:29] 2025-10-11 19:21:29,662 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:21:29] 2025-10-11 19:21:29,665 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:21:29]  *** Error codes and diagnostics ***
[2025-10-11 21:21:29]     "exeErrorCode": 0,
[2025-10-11 21:21:29]     "exeErrorDiag": "",
[2025-10-11 21:21:29]     "pilotErrorCode": 0,
[2025-10-11 21:21:29]     "pilotErrorDiag": "",
[2025-10-11 21:21:29]  *** Listing of results directory ***
[2025-10-11 21:21:29] total 421104
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:07 queuedata.json
[2025-10-11 21:21:29] -rwx------ 1 boinc boinc     36292 Oct 11 06:07 runpilot2-wrapper.sh
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:21:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:06 run_atlas
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:06 job.xml
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc 220295425 Oct 11 20:06 EVNT.46676267._002038.pool.root.1
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:06 input.tar.gz
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:06 start_atlas.sh
[2025-10-11 21:21:29] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:06 shared
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:06 boinc_setup_complete
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc      6378 Oct 11 20:06 init_data.xml
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:06 boinc_lockfile
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc      2550 Oct 11 20:06 pandaJob.out
[2025-10-11 21:21:29] -rw------- 1 boinc boinc    975520 Oct 11 20:06 agis_schedconf.cvmfs.json
[2025-10-11 21:21:29] -rw------- 1 boinc boinc   1560580 Oct 11 20:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:21:29] drwx------ 5 boinc boinc      4096 Oct 11 20:06 pilot3
[2025-10-11 21:21:29] -rw------- 1 boinc boinc 205160721 Oct 11 21:20 HITS.46676269._050653.pool.root.1
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc       530 Oct 11 21:20 boinc_task_state.xml
[2025-10-11 21:21:29] -rw------- 1 boinc boinc        95 Oct 11 21:20 pilot_heartbeat.json
[2025-10-11 21:21:29] -rw------- 1 boinc boinc      1023 Oct 11 21:20 memory_monitor_summary.json
[2025-10-11 21:21:29] -rw------- 1 boinc boinc    263682 Oct 11 21:20 log.46676269._050653.job.log.tgz.1
[2025-10-11 21:21:29] -rw------- 1 boinc boinc      7769 Oct 11 21:20 heartbeat.json
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc      8192 Oct 11 21:21 boinc_mmap_file
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc        27 Oct 11 21:21 wrapper_checkpoint.txt
[2025-10-11 21:21:29] -rw------- 1 boinc boinc       816 Oct 11 21:21 pilotlog.txt
[2025-10-11 21:21:29] -rw------- 1 boinc boinc    661456 Oct 11 21:21 log.46676269._050653.job.log.1
[2025-10-11 21:21:29] -rw------- 1 boinc boinc       357 Oct 11 21:21 output.list
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc       620 Oct 11 21:21 runtime_log
[2025-10-11 21:21:29] -rw------- 1 boinc boinc    942080 Oct 11 21:21 result.tar.gz
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc      8797 Oct 11 21:21 runtime_log.err
[2025-10-11 21:21:29] -rw------- 1 boinc boinc       662 Oct 11 21:21 FSKODmB4fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmS6QMDmyVTUVn.diag
[2025-10-11 21:21:29] -rw-r--r-- 1 boinc boinc     21875 Oct 11 21:21 stderr.txt
[2025-10-11 21:21:29] HITS file was successfully produced:
[2025-10-11 21:21:29] -rw------- 1 boinc boinc 205160721 Oct 11 21:20 shared/HITS.pool.root.1
[2025-10-11 21:21:29]  *** Contents of shared directory: ***
[2025-10-11 21:21:29] total 416996
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc 220295425 Oct 11 20:06 ATLAS.root_0
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:06 input.tar.gz
[2025-10-11 21:21:29] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:06 start_atlas.sh
[2025-10-11 21:21:29] -rw------- 1 boinc boinc 205160721 Oct 11 21:20 HITS.pool.root.1
[2025-10-11 21:21:29] -rw------- 1 boinc boinc    942080 Oct 11 21:21 result.tar.gz
21:21:30 (393899): run_atlas exited; CPU time 16757.621920
21:21:30 (393899): called boinc_finish(0)

</stderr_txt>
]]>

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