Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:26:43 (3301258): wrapper (7.7.26015): starting
05:26:43 (3301258): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 05:26:43] Arguments: --nthreads 8
[2025-10-11 05:26:43] Threads: 8
[2025-10-11 05:26:43] Checking for CVMFS
[2025-10-11 05:26:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:26:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:27:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:27:06] 2.13.2.0 1908877 97494 285200 151579 0 181 19898692 32947201 32873 16776704 0 264855012 99.623 261201860 20762 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 05:27:06] CVMFS is ok
[2025-10-11 05:27:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:27:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:27:06] Further information can be found at the LHC@home message board.
[2025-10-11 05:27:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:27:06] Checking for apptainer binary...
[2025-10-11 05:27:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:27:06] Running /usr/bin/apptainer --version
[2025-10-11 05:27:06] apptainer version 1.4.3-1.el9
[2025-10-11 05:27:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:27:06] c6-6-8-1.aglt2.org
[2025-10-11 05:27:06] apptainer works
[2025-10-11 05:27:07] Set ATHENA_PROC_NUMBER=8
[2025-10-11 05:27:07] Set ATHENA_CORE_NUMBER=8
[2025-10-11 05:27:07] Starting ATLAS job with PandaID=6838067993
[2025-10-11 05:27:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:23:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:23:49] 2025-10-11 12:23:05,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:23:49] 2025-10-11 12:23:05,608 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:23:49] 2025-10-11 12:23:05,609 | INFO     | sum of square deviations: 1496597700.5562055
[2025-10-11 08:23:49] 2025-10-11 12:23:05,615 | INFO     | sum of deviations: 9818035554.396458
[2025-10-11 08:23:49] 2025-10-11 12:23:05,616 | INFO     | mean x: 1760180192.1952662
[2025-10-11 08:23:49] 2025-10-11 12:23:05,616 | INFO     | mean y: 2147284.74556213
[2025-10-11 08:23:49] 2025-10-11 12:23:05,616 | INFO     | -- intersect: -11545051874.183321
[2025-10-11 08:23:49] 2025-10-11 12:23:05,616 | INFO     | intersect: -11545051874.183321
[2025-10-11 08:23:49] 2025-10-11 12:23:05,616 | INFO     | chi2: 3.751335641121499
[2025-10-11 08:23:49] 2025-10-11 12:23:05,617 | INFO     | sum of square deviations: 1367656510.359755
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | sum of deviations: 20746820657.091476
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | mean x: 1760180039.7012196
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | mean y: 2159932.0426829266
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | -- intersect: -26699090953.14299
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | intersect: -26699090953.14299
[2025-10-11 08:23:49] 2025-10-11 12:23:05,618 | INFO     | chi2: 3.0134137239937693
[2025-10-11 08:23:49] 2025-10-11 12:23:05,619 | INFO     | current chi2=3.0134137239937693 (change=19.67091158249761 %)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,623 | INFO     | right removable region: 163
[2025-10-11 08:23:49] 2025-10-11 12:23:05,623 | INFO     | sum of square deviations: 1367646444.7560961
[2025-10-11 08:23:49] 2025-10-11 12:23:05,624 | INFO     | sum of deviations: -24595115698.487816
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | mean x: 1760180344.695122
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | mean y: 2187739.8902439023
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | -- intersect: 31656449990.176197
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | intersect: 31656449990.176197
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | chi2: 1.3406974064424342
[2025-10-11 08:23:49] 2025-10-11 12:23:05,625 | INFO     | current chi2=1.3406974064424342 (change=64.2607984274737 %)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,626 | INFO     | sum of square deviations: 1246333852.3396208
[2025-10-11 08:23:49] 2025-10-11 12:23:05,627 | INFO     | sum of deviations: -36814753374.679245
[2025-10-11 08:23:49] 2025-10-11 12:23:05,631 | INFO     | mean x: 1760180497.1886792
[2025-10-11 08:23:49] 2025-10-11 12:23:05,631 | INFO     | mean y: 2203019.289308176
[2025-10-11 08:23:49] 2025-10-11 12:23:05,631 | INFO     | -- intersect: 51995182891.63864
[2025-10-11 08:23:49] 2025-10-11 12:23:05,631 | INFO     | intersect: 51995182891.63864
[2025-10-11 08:23:49] 2025-10-11 12:23:05,632 | INFO     | chi2: 0.9775265068026437
[2025-10-11 08:23:49] 2025-10-11 12:23:05,632 | INFO     | current chi2=0.9775265068026437 (change=27.088207815921063 %)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,632 | INFO     | sum of square deviations: 1132416503.4090962
[2025-10-11 08:23:49] 2025-10-11 12:23:05,633 | INFO     | sum of deviations: -33387224460.5
[2025-10-11 08:23:49] 2025-10-11 12:23:05,633 | INFO     | mean x: 1760180649.6818182
[2025-10-11 08:23:49] 2025-10-11 12:23:05,633 | INFO     | mean y: 2198414.0714285714
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | -- intersect: 51897897801.21224
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | intersect: 51897897801.21224
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | chi2: 0.9764670496236975
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | current chi2=0.9764670496236975 (change=0.10838142716064329 %)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | left removable region: 30
[2025-10-11 08:23:49] 2025-10-11 12:23:05,634 | INFO     | sum of square deviations: 729450103.6691723
[2025-10-11 08:23:49] 2025-10-11 12:23:05,639 | INFO     | sum of deviations: -7084818211.939855
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | mean x: 1760180924.1804512
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | mean y: 2190025.3308270676
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | -- intersect: 17098029487.434135
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | intersect: 17098029487.434135
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | chi2: 0.1185009992699285
[2025-10-11 08:23:49] 2025-10-11 12:23:05,640 | INFO     | -- intersect: 17098029487.434135
[2025-10-11 08:23:49] 2025-10-11 12:23:05,641 | INFO     | current memory leak: -9.71 B/s (using 133 data points, chi2=0.12)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,641 | INFO     | could have reported an average CPU frequency of 2556 MHz (9 samples)
[2025-10-11 08:23:49] 2025-10-11 12:23:05,641 | INFO     | ..............................
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . Timing measurements:
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . get job = 1 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . initial setup = 10 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . payload setup = 43 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . stage-in = 0 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . payload execution = 10311 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . stage-out = 3 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | . log creation = 0 s
[2025-10-11 08:23:49] 2025-10-11 12:23:05,642 | INFO     | ..............................
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | 
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | job summary report
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | --------------------------------------------------
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | PanDA job id: 6838067993
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | task id: 46676269
[2025-10-11 08:23:49] 2025-10-11 12:23:06,012 | INFO     | errors: (none)
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | pilot state: finished 
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | transexitcode: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | exeerrorcode: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | exeerrordiag: 
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | exitcode: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | exitmsg: OK
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | cpuconsumptiontime: 47473 s
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | nevents: 400
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | neventsw: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | pid: 3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | pgrp: 3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | corecount: 8
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | event service: False
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 4: 2348941, 15: 2348969, 26: 2349125, 37: 2349153, 41: 2349443, 49: 2349471, 10360: 2378427, 10364: 2387425
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | --------------------------------------------------
[2025-10-11 08:23:49] 2025-10-11 12:23:06,013 | INFO     | 
[2025-10-11 08:23:49] 2025-10-11 12:23:06,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:23:49] 2025-10-11 12:23:06,236 | INFO     | job 6838067993 has completed (purged errors)
[2025-10-11 08:23:49] 2025-10-11 12:23:06,236 | INFO     | overall cleanup function is called
[2025-10-11 08:23:49] 2025-10-11 12:23:06,501 | INFO     | PID=3306507 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:23:49] 2025-10-11 12:23:06,501 | INFO     | .. there are 32 such processes running
[2025-10-11 08:23:49] 2025-10-11 12:23:07,260 | INFO     | --- collectZombieJob: --- 10, [3320520]
[2025-10-11 08:23:49] 2025-10-11 12:23:07,260 | INFO     | zombie collector waiting for pid 3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:07,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:23:49] 2025-10-11 12:23:07,260 | INFO     | collected zombie processes
[2025-10-11 08:23:49] 2025-10-11 12:23:07,260 | INFO     | will attempt to kill all subprocesses of pid=3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:09,004 | INFO     | process IDs to be killed: [3320520] (in reverse order)
[2025-10-11 08:23:49] 2025-10-11 12:23:09,529 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:23:49] 2025-10-11 12:23:09,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:23:49] 2025-10-11 12:23:09,592 | INFO     | did not find any defunct processes belonging to 3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:09,612 | INFO     | did not find any defunct processes belonging to 3320520
[2025-10-11 08:23:49] 2025-10-11 12:23:09,612 | INFO     | ready for new job
[2025-10-11 08:23:49] 2025-10-11 12:23:09,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:23:49] 2025-10-11 12:23:09,614 | INFO     | ***************************************
[2025-10-11 08:23:49] 2025-10-11 12:23:09,615 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:23:49] 2025-10-11 12:23:09,615 | INFO     | ***************************************
[2025-10-11 08:23:49] 2025-10-11 12:23:09,615 | INFO     | 
[2025-10-11 08:23:49] 2025-10-11 12:23:09,639 | INFO     | architecture information:
[2025-10-11 08:23:49] 2025-10-11 12:23:09,643 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:23:49] 2025-10-11 12:23:09,700 | INFO     | cat /etc/os-release:
[2025-10-11 08:23:49] NAME="CentOS Linux"
[2025-10-11 08:23:49] VERSION="7 (Core)"
[2025-10-11 08:23:49] ID="centos"
[2025-10-11 08:23:49] ID_LIKE="rhel fedora"
[2025-10-11 08:23:49] VERSION_ID="7"
[2025-10-11 08:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:23:49] ANSI_COLOR="0;31"
[2025-10-11 08:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:23:49] HOME_URL="https://www.centos.org/"
[2025-10-11 08:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:23:49] 
[2025-10-11 08:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:23:49] 
[2025-10-11 08:23:49] 2025-10-11 12:23:09,701 | INFO     | ***************************************
[2025-10-11 08:23:49] 2025-10-11 12:23:10,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 08:23:49] 2025-10-11 12:23:10,297 | INFO     | sufficient remaining disk space (73704407040 B)
[2025-10-11 08:23:49] 2025-10-11 12:23:10,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:23:49] 2025-10-11 12:23:10,298 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:23:49] 2025-10-11 12:23:10,298 | INFO     | update_server=False
[2025-10-11 08:23:49] 2025-10-11 12:23:10,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:23:49] 2025-10-11 12:23:10,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:23:49] 2025-10-11 12:23:10,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:23:49] 2025-10-11 12:23:10,608 | INFO     | aborting loop
[2025-10-11 08:23:49] 2025-10-11 12:23:10,703 | INFO     | all payload control threads have been joined
[2025-10-11 08:23:49] 2025-10-11 12:23:11,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:23:49] 2025-10-11 12:23:11,304 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:11,320 | INFO     | [job] validate thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:11,350 | INFO     | all data control threads have been joined
[2025-10-11 08:23:49] 2025-10-11 12:23:11,614 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:11,710 | INFO     | [payload] control thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:11,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:11,794 | INFO     | all job control threads have been joined
[2025-10-11 08:23:49] 2025-10-11 12:23:12,097 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,136 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,358 | INFO     | [data] control thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,382 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,383 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,391 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,482 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,676 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:12,799 | INFO     | [job] control thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:13,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:23:49] 2025-10-11 12:23:17,110 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:23:49] 2025-10-11 12:23:41,092 | INFO     | PID=3306507 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:23:49] 2025-10-11 12:23:41,104 | INFO     | .. there are 32 such processes running
[2025-10-11 08:23:49] 2025-10-11 12:23:41,105 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:23:49] 2025-10-11 12:23:41,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:23:49] 2025-10-11 12:23:41,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:23:49] 2025-10-11 12:23:41,901 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:23:49] 2025-10-11 12:23:42,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838690326336)>', '<ExcThread(monitor, started 139837826922240)>']
[2025-10-11 08:23:49] 2025-10-11 12:23:43,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:23:49] 2025-10-11 12:23:43,117 | INFO     | [monitor] control thread has ended
[2025-10-11 08:23:49] 2025-10-11 12:23:47,616 | INFO     | all workflow threads have been joined
[2025-10-11 08:23:49] 2025-10-11 12:23:47,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:23:49] 2025-10-11 12:23:47,616 | INFO     | traces error code: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:47,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:23:49] 2025-10-11 12:23:47,947 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:23:49] 2025-10-11 12:23:47,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:23:49] 2025-10-11 12:23:48,000 [wrapper] pilotpid: 3306507
[2025-10-11 08:23:49] 2025-10-11 12:23:48,019 [wrapper] Pilot exit status: 0
[2025-10-11 08:23:49] 2025-10-11 12:23:48,101 [wrapper] pandaids: 6838067993
[2025-10-11 08:23:49] 2025-10-11 12:23:48,491 [wrapper] cleanup supervisor_pilot 3759356 3306508
[2025-10-11 08:23:49] 2025-10-11 12:23:48,504 [wrapper] Test setup, not cleaning
[2025-10-11 08:23:49] 2025-10-11 12:23:48,536 [wrapper] apfmon messages muted
[2025-10-11 08:23:49] 2025-10-11 12:23:48,540 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:23:49] 2025-10-11 12:23:48,566 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:23:49]  *** Error codes and diagnostics ***
[2025-10-11 08:23:49]     "exeErrorCode": 0,
[2025-10-11 08:23:49]     "exeErrorDiag": "",
[2025-10-11 08:23:49]     "pilotErrorCode": 0,
[2025-10-11 08:23:49]     "pilotErrorDiag": "",
[2025-10-11 08:23:49]  *** Listing of results directory ***
[2025-10-11 08:23:49] total 412892
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 23:42 pilot3.tar.gz
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 00:13 queuedata.json
[2025-10-11 08:23:49] -rwx------ 1 boincer umatlas     36292 Oct 11 00:14 runpilot2-wrapper.sh
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas       100 Oct 11 05:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:23:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 05:26 run_atlas
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas       105 Oct 11 05:26 job.xml
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas 220875375 Oct 11 05:26 EVNT.46676267._002062.pool.root.1
[2025-10-11 08:23:49] drwxrwx--x 2 boincer umatlas      4096 Oct 11 05:26 shared
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 05:26 input.tar.gz
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 05:26 start_atlas.sh
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas         0 Oct 11 05:26 boinc_lockfile
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 05:27 pandaJob.out
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas    975525 Oct 11 05:28 agis_schedconf.cvmfs.json
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas   1560580 Oct 11 05:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:23:49] drwx------ 5 boincer umatlas      4096 Oct 11 05:28 pilot3
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas 194512395 Oct 11 08:21 HITS.46676269._051244.pool.root.1
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas       531 Oct 11 08:21 boinc_task_state.xml
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas      1044 Oct 11 08:22 memory_monitor_summary.json
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas      6858 Oct 11 08:22 init_data.xml
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas    397186 Oct 11 08:22 log.46676269._051244.job.log.tgz.1
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas      7834 Oct 11 08:23 heartbeat.json
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 08:23 boinc_mmap_file
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas        28 Oct 11 08:23 wrapper_checkpoint.txt
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas        95 Oct 11 08:23 pilot_heartbeat.json
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas      4824 Oct 11 08:23 pilotlog.txt
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas   1358676 Oct 11 08:23 log.46676269._051244.job.log.1
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas       357 Oct 11 08:23 output.list
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas       620 Oct 11 08:23 runtime_log
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas   1771520 Oct 11 08:23 result.tar.gz
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 08:23 runtime_log.err
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas       654 Oct 11 08:23 52XNDmzAgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEERMDmjK1zdm.diag
[2025-10-11 08:23:49] -rw-r--r-- 1 boincer umatlas     21152 Oct 11 08:23 stderr.txt
[2025-10-11 08:23:49] HITS file was successfully produced:
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas 194512395 Oct 11 08:21 shared/HITS.pool.root.1
[2025-10-11 08:23:49]  *** Contents of shared directory: ***
[2025-10-11 08:23:49] total 407972
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas 220875375 Oct 11 05:26 ATLAS.root_0
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 05:26 input.tar.gz
[2025-10-11 08:23:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 05:26 start_atlas.sh
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas 194512395 Oct 11 08:21 HITS.pool.root.1
[2025-10-11 08:23:49] -rw------- 1 boincer umatlas   1771520 Oct 11 08:23 result.tar.gz
08:24:12 (3301258): run_atlas exited; CPU time 48028.685200
08:24:12 (3301258): called boinc_finish(0)

</stderr_txt>
]]>

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