Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:05:01 (2782665): wrapper (7.7.26015): starting
17:05:01 (2782665): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:05:01] Arguments: --nthreads 12
[2025-10-11 17:05:01] Threads: 12
[2025-10-11 17:05:01] Checking for CVMFS
[2025-10-11 17:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:05:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:05:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:05:01] 2.13.1.0 1560427 2795 92996 151587 3 57 2875065 4097024 0 130560 0 3367347 99.990 220323 8769 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-11 17:05:01] CVMFS is ok
[2025-10-11 17:05:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:05:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:05:01] Further information can be found at the LHC@home message board.
[2025-10-11 17:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:05:01] Checking for apptainer binary...
[2025-10-11 17:05:01] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 17:05:01] apptainer is not installed, using version from CVMFS
[2025-10-11 17:05:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:05:01] pckelar5.cern.ch
[2025-10-11 17:05:01] apptainer works
[2025-10-11 17:05:02] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:05:02] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:05:02] Starting ATLAS job with PandaID=6837875911
[2025-10-11 17:05:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:13:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:13:21]  status=None
[2025-10-11 18:13:21]  status_code=0
[2025-10-11 18:13:21]  storage_token=
[2025-10-11 18:13:21]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6837875911/log.46676269._047835.job.log.tgz.1
[2025-10-11 18:13:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/a5/log.46676269._047835.job.log.tgz.1
[2025-10-11 18:13:21]  workdir=None
[2025-10-11 18:13:21] ]
[2025-10-11 18:13:21] 2025-10-11 16:12:40,022 | INFO     | transferring file log.46676269._047835.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6837875911/log.46676269._047835.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 18:13:21] 2025-10-11 16:12:40,022 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6837875911/log.46676269._047835.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._047835.job
[2025-10-11 18:13:21] 2025-10-11 16:12:40,038 | INFO     | adding to output.list: log.46676269._047835.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/a5/log.46676269._047835.job.log.tg
[2025-10-11 18:13:21] 2025-10-11 16:12:40,039 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 18:13:21] 2025-10-11 16:12:40,039 | INFO     | summary of transferred files:
[2025-10-11 18:13:21] 2025-10-11 16:12:40,039 | INFO     |  -- lfn=log.46676269._047835.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 18:13:21] 2025-10-11 16:12:40,039 | INFO     | stage-out finished correctly
[2025-10-11 18:13:21] 2025-10-11 16:12:40,061 | INFO     | time since job start (4051s) is within the limit (172800.0s)
[2025-10-11 18:13:21] 2025-10-11 16:12:40,106 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 18:13:21] 2025-10-11 16:12:40,866 | INFO     | monitor loop #301: job 0:6837875911 is in state 'finished'
[2025-10-11 18:13:21] 2025-10-11 16:12:40,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:13:21] 2025-10-11 16:12:41,764 | INFO     | job 6837875911 has state=finished
[2025-10-11 18:13:21] 2025-10-11 16:12:41,764 | INFO     | preparing for final server update for job 6837875911 in state='finished'
[2025-10-11 18:13:21] 2025-10-11 16:12:42,072 | INFO     | time since job start (4053s) is within the limit (172800.0s)
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | this job has now completed (state=finished)
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | log transfer has been attempted: DONE
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | job 6837875911 has finished - writing final server update
[2025-10-11 18:13:21] 2025-10-11 16:12:42,587 | INFO     | total number of processed events: 400 (read)
[2025-10-11 18:13:21] 2025-10-11 16:12:42,589 | INFO     | executing command: lscpu
[2025-10-11 18:13:21] 2025-10-11 16:12:42,607 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 18:13:21] 2025-10-11 16:12:43,369 | INFO     | monitor loop #302: job 0:6837875911 is in state 'finished'
[2025-10-11 18:13:21] 2025-10-11 16:12:43,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:13:21] 2025-10-11 16:12:44,077 | INFO     | time since job start (4055s) is within the limit (172800.0s)
[2025-10-11 18:13:21] 2025-10-11 16:12:45,187 | INFO     | PID=2786466 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:13:21] 2025-10-11 16:12:45,872 | INFO     | monitor loop #303: job 0:6837875911 is in state 'finished'
[2025-10-11 18:13:21] 2025-10-11 16:12:45,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:13:21] 2025-10-11 16:12:46,188 | INFO     | time since job start (4057s) is within the limit (172800.0s)
[2025-10-11 18:13:21] 2025-10-11 16:12:46,619 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 18:13:21] 2025-10-11 16:12:46,621 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2460.4641666666666
[2025-10-11 18:13:21] 2025-10-11 16:12:46,623 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837875911/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:13:21] 2025-10-11 16:12:46,624 | INFO     | extracted standard info from prmon json
[2025-10-11 18:13:21] 2025-10-11 16:12:46,624 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:13:21] 2025-10-11 16:12:46,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:13:21] 2025-10-11 16:12:46,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:13:21] 2025-10-11 16:12:46,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | sum of square deviations: 63666310.0
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | sum of deviations: -284331735.9999999
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | mean x: 1760197207.0
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | mean y: 2744597.6101694917
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | -- intersect: 7863729906.302649
[2025-10-11 18:13:21] 2025-10-11 16:12:46,626 | INFO     | intersect: 7863729906.302649
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | chi2: 0.03334813544167568
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | -- intersect: 7863729906.302649
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | current memory leak: -4.47 B/s (using 59 data points, chi2=0.03)
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | could have reported an average CPU frequency of 2561 MHz (6 samples)
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | ..............................
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | . Timing measurements:
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | . get job = 0 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,627 | INFO     | . initial setup = 1 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | . payload setup = 6 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | . stage-in = 0 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | . payload execution = 4025 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | . stage-out = 0 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | . log creation = 0 s
[2025-10-11 18:13:21] 2025-10-11 16:12:46,628 | INFO     | ..............................
[2025-10-11 18:13:21] 2025-10-11 16:12:47,076 | INFO     | 
[2025-10-11 18:13:21] 2025-10-11 16:12:47,076 | INFO     | job summary report
[2025-10-11 18:13:21] 2025-10-11 16:12:47,076 | INFO     | --------------------------------------------------
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | PanDA job id: 6837875911
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | task id: 46676269
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | errors: (none)
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | pilot state: finished 
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | transexitcode: 0
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | exeerrorcode: 0
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | exeerrordiag: 
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | exitcode: 0
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | exitmsg: OK
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | cpuconsumptiontime: 44237 s
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | nevents: 400
[2025-10-11 18:13:21] 2025-10-11 16:12:47,077 | INFO     | neventsw: 0
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | pid: 2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | pgrp: 2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | corecount: 12
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | event service: False
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 4035: 2375122, 4037: 2384304, 4043: 2384442}
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | --------------------------------------------------
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | 
[2025-10-11 18:13:21] 2025-10-11 16:12:47,078 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 18:13:21] 2025-10-11 16:12:47,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | job 6837875911 has completed (purged errors)
[2025-10-11 18:13:21] 2025-10-11 16:12:47,099 | INFO     | overall cleanup function is called
[2025-10-11 18:13:21] 2025-10-11 16:12:48,106 | INFO     | --- collectZombieJob: --- 10, [2793794]
[2025-10-11 18:13:21] 2025-10-11 16:12:48,106 | INFO     | zombie collector waiting for pid 2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:48,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:13:21] 2025-10-11 16:12:48,107 | INFO     | collected zombie processes
[2025-10-11 18:13:21] 2025-10-11 16:12:48,107 | INFO     | will attempt to kill all subprocesses of pid=2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:48,186 | INFO     | process IDs to be killed: [2793794] (in reverse order)
[2025-10-11 18:13:21] 2025-10-11 16:12:48,223 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:13:21] 2025-10-11 16:12:48,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:13:21] 2025-10-11 16:12:48,225 | INFO     | did not find any defunct processes belonging to 2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:48,227 | INFO     | did not find any defunct processes belonging to 2793794
[2025-10-11 18:13:21] 2025-10-11 16:12:48,227 | INFO     | ready for new job
[2025-10-11 18:13:21] 2025-10-11 16:12:48,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:13:21] 2025-10-11 16:12:48,228 | INFO     | ***************************************
[2025-10-11 18:13:21] 2025-10-11 16:12:48,229 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:13:21] 2025-10-11 16:12:48,229 | INFO     | ***************************************
[2025-10-11 18:13:21] 2025-10-11 16:12:48,229 | INFO     | 
[2025-10-11 18:13:21] 2025-10-11 16:12:48,229 | INFO     | architecture information:
[2025-10-11 18:13:21] 2025-10-11 16:12:48,229 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:13:21] 2025-10-11 16:12:48,239 | INFO     | cat /etc/os-release:
[2025-10-11 18:13:21] NAME="CentOS Linux"
[2025-10-11 18:13:21] VERSION="7 (Core)"
[2025-10-11 18:13:21] ID="centos"
[2025-10-11 18:13:21] ID_LIKE="rhel fedora"
[2025-10-11 18:13:21] VERSION_ID="7"
[2025-10-11 18:13:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:13:21] ANSI_COLOR="0;31"
[2025-10-11 18:13:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:13:21] HOME_URL="https://www.centos.org/"
[2025-10-11 18:13:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:13:21] 
[2025-10-11 18:13:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:13:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:13:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:13:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:13:21] 
[2025-10-11 18:13:21] 2025-10-11 16:12:48,239 | INFO     | ***************************************
[2025-10-11 18:13:21] 2025-10-11 16:12:48,742 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 18:13:21] 2025-10-11 16:12:48,755 | INFO     | sufficient remaining disk space (1817600589824 B)
[2025-10-11 18:13:21] 2025-10-11 16:12:48,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:13:21] 2025-10-11 16:12:48,755 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:13:21] 2025-10-11 16:12:48,755 | INFO     | update_server=False
[2025-10-11 18:13:21] 2025-10-11 16:12:48,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:13:21] 2025-10-11 16:12:48,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:13:21] 2025-10-11 16:12:48,778 | INFO     | all job control threads have been joined
[2025-10-11 18:13:21] 2025-10-11 16:12:49,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:13:21] 2025-10-11 16:12:49,380 | INFO     | aborting loop
[2025-10-11 18:13:21] 2025-10-11 16:12:49,514 | INFO     | all payload control threads have been joined
[2025-10-11 18:13:21] 2025-10-11 16:12:49,698 | INFO     | all data control threads have been joined
[2025-10-11 18:13:21] 2025-10-11 16:12:49,761 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:49,772 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:49,783 | INFO     | [job] control thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:49,964 | INFO     | [job] validate thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,083 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,386 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,467 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,486 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,520 | INFO     | [payload] control thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:13:21] 2025-10-11 16:12:50,704 | INFO     | [data] control thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,761 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:50,966 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:51,209 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:51,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:13:21] 2025-10-11 16:12:52,703 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:54,681 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:12:58,920 | INFO     | job.realtimelogging is not enabled
[2025-10-11 18:13:21] 2025-10-11 16:12:59,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:13:21] 2025-10-11 16:13:15,441 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:13:21] 2025-10-11 16:13:16,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789835761472)>', '<ExcThread(monitor, started 139789147817728)>']
[2025-10-11 18:13:21] 2025-10-11 16:13:19,375 | INFO     | PID=2786466 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:13:21] 2025-10-11 16:13:19,376 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:13:21] 2025-10-11 16:13:19,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:13:21] 2025-10-11 16:13:19,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:13:21] 2025-10-11 16:13:19,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:13:21] 2025-10-11 16:13:19,376 | INFO     | [monitor] control thread has ended
[2025-10-11 18:13:21] 2025-10-11 16:13:21,247 | INFO     | all workflow threads have been joined
[2025-10-11 18:13:21] 2025-10-11 16:13:21,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:13:21] 2025-10-11 16:13:21,247 | INFO     | traces error code: 0
[2025-10-11 18:13:21] 2025-10-11 16:13:21,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:13:21] 2025-10-11 16:13:21,325 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:13:21] 2025-10-11 16:13:21,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:13:21] 2025-10-11 16:13:21,331 [wrapper] pilotpid: 2786466
[2025-10-11 18:13:21] 2025-10-11 16:13:21,333 [wrapper] Pilot exit status: 0
[2025-10-11 18:13:21] 2025-10-11 16:13:21,341 [wrapper] pandaids: 6837875911
[2025-10-11 18:13:21] 2025-10-11 16:13:21,362 [wrapper] cleanup supervisor_pilot 2807129 2786467
[2025-10-11 18:13:21] 2025-10-11 16:13:21,364 [wrapper] Test setup, not cleaning
[2025-10-11 18:13:21] 2025-10-11 16:13:21,366 [wrapper] apfmon messages muted
[2025-10-11 18:13:21] 2025-10-11 16:13:21,368 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:13:21] 2025-10-11 16:13:21,370 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:13:21]  *** Error codes and diagnostics ***
[2025-10-11 18:13:21]     "exeErrorCode": 0,
[2025-10-11 18:13:21]     "exeErrorDiag": "",
[2025-10-11 18:13:21]     "pilotErrorCode": 0,
[2025-10-11 18:13:21]     "pilotErrorDiag": "",
[2025-10-11 18:13:21]  *** Listing of results directory ***
[2025-10-11 18:13:21] total 408272
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:15 pilot3.tar.gz
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc      5112 Oct 11 02:27 queuedata.json
[2025-10-11 18:13:21] -rwx------ 1 boinc boinc     36292 Oct 11 02:27 runpilot2-wrapper.sh
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc       100 Oct 11 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:13:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 17:05 run_atlas
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc       105 Oct 11 17:05 job.xml
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc      6294 Oct 11 17:05 init_data.xml
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc 219667022 Oct 11 17:05 EVNT.46676267._001931.pool.root.1
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:05 start_atlas.sh
[2025-10-11 18:13:21] drwxrwx--x 2 boinc boinc        68 Oct 11 17:05 shared
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc    569684 Oct 11 17:05 input.tar.gz
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc         0 Oct 11 17:05 boinc_lockfile
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc      2550 Oct 11 17:05 pandaJob.out
[2025-10-11 18:13:21] -rw------- 1 boinc boinc    975536 Oct 11 17:05 agis_schedconf.cvmfs.json
[2025-10-11 18:13:21] -rw------- 1 boinc boinc   1560580 Oct 11 17:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:13:21] drwx------ 5 boinc boinc      4096 Oct 11 17:05 pilot3
[2025-10-11 18:13:21] -rw------- 1 boinc boinc 192541171 Oct 11 18:12 HITS.46676269._047835.pool.root.1
[2025-10-11 18:13:21] -rw------- 1 boinc boinc      1014 Oct 11 18:12 memory_monitor_summary.json
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc       529 Oct 11 18:12 boinc_task_state.xml
[2025-10-11 18:13:21] -rw------- 1 boinc boinc    391028 Oct 11 18:12 log.46676269._047835.job.log.tgz.1
[2025-10-11 18:13:21] -rw------- 1 boinc boinc      7782 Oct 11 18:12 heartbeat.json
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc      8192 Oct 11 18:13 boinc_mmap_file
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc        27 Oct 11 18:13 wrapper_checkpoint.txt
[2025-10-11 18:13:21] -rw------- 1 boinc boinc        95 Oct 11 18:13 pilot_heartbeat.json
[2025-10-11 18:13:21] -rw------- 1 boinc boinc      4822 Oct 11 18:13 pilotlog.txt
[2025-10-11 18:13:21] -rw------- 1 boinc boinc    594797 Oct 11 18:13 log.46676269._047835.job.log.1
[2025-10-11 18:13:21] -rw------- 1 boinc boinc       357 Oct 11 18:13 output.list
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc       620 Oct 11 18:13 runtime_log
[2025-10-11 18:13:21] -rw------- 1 boinc boinc   1003520 Oct 11 18:13 result.tar.gz
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc      8727 Oct 11 18:13 runtime_log.err
[2025-10-11 18:13:21] -rw------- 1 boinc boinc       656 Oct 11 18:13 G6nKDmrdcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpseNDmZgjNIo.diag
[2025-10-11 18:13:21] -rw-r--r-- 1 boinc boinc     22203 Oct 11 18:13 stderr.txt
[2025-10-11 18:13:21] HITS file was successfully produced:
[2025-10-11 18:13:21] -rw------- 1 boinc boinc 192541171 Oct 11 18:12 shared/HITS.pool.root.1
[2025-10-11 18:13:21]  *** Contents of shared directory: ***
[2025-10-11 18:13:21] total 404108
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc 219667022 Oct 11 17:05 ATLAS.root_0
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:05 start_atlas.sh
[2025-10-11 18:13:21] -rw-r--r-- 2 boinc boinc    569684 Oct 11 17:05 input.tar.gz
[2025-10-11 18:13:21] -rw------- 1 boinc boinc 192541171 Oct 11 18:12 HITS.pool.root.1
[2025-10-11 18:13:21] -rw------- 1 boinc boinc   1003520 Oct 11 18:13 result.tar.gz
18:13:22 (2782665): run_atlas exited; CPU time 44249.233968
18:13:22 (2782665): called boinc_finish(0)

</stderr_txt>
]]>

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