Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:13 (2722195): wrapper (7.7.26015): starting
14:43:13 (2722195): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:43:13] Arguments: --nthreads 12
[2025-10-11 14:43:13] Threads: 12
[2025-10-11 14:43:13] Checking for CVMFS
[2025-10-11 14:43:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:43:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:43:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:43:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:43:13] 2.13.1.0 1560427 2653 92128 151584 0 57 2857462 4097024 0 130560 0 3202432 99.989 216290 8801 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-11 14:43:13] CVMFS is ok
[2025-10-11 14:43:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:43:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:43:13] Further information can be found at the LHC@home message board.
[2025-10-11 14:43:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:43:13] Checking for apptainer binary...
[2025-10-11 14:43:13] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 14:43:13] apptainer is not installed, using version from CVMFS
[2025-10-11 14:43:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:43:14] pckelar5.cern.ch
[2025-10-11 14:43:14] apptainer works
[2025-10-11 14:43:14] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:43:14] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:43:14] Starting ATLAS job with PandaID=6838063570
[2025-10-11 14:43:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:56:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:56:33]  scope=mc23_13p6TeV
[2025-10-11 15:56:33]  status=None
[2025-10-11 15:56:33]  status_code=0
[2025-10-11 15:56:33]  storage_token=
[2025-10-11 15:56:33]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6838063570/log.46676269._050447.job.log.tgz.1
[2025-10-11 15:56:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/61/log.46676269._050447.job.log.tgz.1
[2025-10-11 15:56:33]  workdir=None
[2025-10-11 15:56:33] ]
[2025-10-11 15:56:33] 2025-10-11 13:55:32,977 | INFO     | transferring file log.46676269._050447.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6838063570/log.46676269._050447.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 15:56:33] 2025-10-11 13:55:32,978 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6838063570/log.46676269._050447.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._050447.job
[2025-10-11 15:56:33] 2025-10-11 13:55:32,993 | INFO     | adding to output.list: log.46676269._050447.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/61/log.46676269._050447.job.log.tg
[2025-10-11 15:56:33] 2025-10-11 13:55:32,993 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:56:33] 2025-10-11 13:55:32,993 | INFO     | summary of transferred files:
[2025-10-11 15:56:33] 2025-10-11 13:55:32,993 | INFO     |  -- lfn=log.46676269._050447.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:56:33] 2025-10-11 13:55:32,994 | INFO     | stage-out finished correctly
[2025-10-11 15:56:33] 2025-10-11 13:55:33,697 | INFO     | time since job start (4332s) is within the limit (172800.0s)
[2025-10-11 15:56:33] 2025-10-11 13:55:35,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:56:33] 2025-10-11 13:55:35,702 | INFO     | time since job start (4334s) is within the limit (172800.0s)
[2025-10-11 15:56:33] 2025-10-11 13:55:37,708 | INFO     | time since job start (4336s) is within the limit (172800.0s)
[2025-10-11 15:56:33] 2025-10-11 13:55:38,179 | INFO     | job 6838063570 has state=finished
[2025-10-11 15:56:33] 2025-10-11 13:55:38,179 | INFO     | preparing for final server update for job 6838063570 in state='finished'
[2025-10-11 15:56:33] 2025-10-11 13:55:38,180 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:56:33] 2025-10-11 13:55:38,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:56:33] 2025-10-11 13:55:38,180 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:56:33] 2025-10-11 13:55:38,180 | INFO     | job 6838063570 has finished - writing final server update
[2025-10-11 15:56:33] 2025-10-11 13:55:38,180 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:56:33] 2025-10-11 13:55:38,182 | INFO     | executing command: lscpu
[2025-10-11 15:56:33] 2025-10-11 13:55:38,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:56:33] 2025-10-11 13:55:38,917 | WARNING  | process 2733274 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 15:56:33] 2025-10-11 13:55:38,917 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838063570/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:56:33] 2025-10-11 13:55:39,000 | INFO     | number of running child processes to parent process 2733274: 1
[2025-10-11 15:56:33] 2025-10-11 13:55:39,000 | INFO     | maximum number of monitored processes: 6
[2025-10-11 15:56:33] 2025-10-11 13:55:39,714 | INFO     | time since job start (4338s) is within the limit (172800.0s)
[2025-10-11 15:56:33] 2025-10-11 13:55:41,503 | INFO     | monitor loop #319: job 0:6838063570 is in state 'finished'
[2025-10-11 15:56:33] 2025-10-11 13:55:41,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:56:33] 2025-10-11 13:55:41,719 | INFO     | time since job start (4340s) is within the limit (172800.0s)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,027 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 15:56:33] 2025-10-11 13:55:43,029 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2215.4500000000003
[2025-10-11 15:56:33] 2025-10-11 13:55:43,031 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838063570/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,031 | INFO     | extracted standard info from prmon json
[2025-10-11 15:56:33] 2025-10-11 13:55:43,031 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:56:33] 2025-10-11 13:55:43,032 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:56:33] 2025-10-11 13:55:43,032 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:56:33] 2025-10-11 13:55:43,032 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:56:33] 2025-10-11 13:55:43,033 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | sum of square deviations: 81266640.0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | sum of deviations: -11407082838.0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | mean x: 1760188851.5
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | mean y: 2911908.4375
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | -- intersect: 247073789203.03934
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | intersect: 247073789203.03934
[2025-10-11 15:56:33] 2025-10-11 13:55:43,034 | INFO     | chi2: 0.09174046277038346
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | -- intersect: 247073789203.03934
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | current memory leak: -140.37 B/s (using 64 data points, chi2=0.09)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | could have reported an average CPU frequency of 2535 MHz (6 samples)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | ..............................
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | . Timing measurements:
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | . get job = 0 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | . initial setup = 1 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | . payload setup = 6 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,035 | INFO     | . stage-in = 0 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,036 | INFO     | . payload execution = 4307 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,036 | INFO     | . stage-out = 0 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,036 | INFO     | . log creation = 0 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,036 | INFO     | ..............................
[2025-10-11 15:56:33] 2025-10-11 13:55:43,456 | INFO     | 
[2025-10-11 15:56:33] 2025-10-11 13:55:43,456 | INFO     | job summary report
[2025-10-11 15:56:33] 2025-10-11 13:55:43,456 | INFO     | --------------------------------------------------
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | PanDA job id: 6838063570
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | task id: 46676269
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | errors: (none)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | pilot state: finished 
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | transexitcode: 0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | exeerrorcode: 0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | exeerrordiag: 
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | exitcode: 0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | exitmsg: OK
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | cpuconsumptiontime: 46593 s
[2025-10-11 15:56:33] 2025-10-11 13:55:43,457 | INFO     | nevents: 400
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | neventsw: 0
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | pid: 2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | pgrp: 2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | corecount: 12
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | event service: False
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | sizes: {0: 2348743, 1: 2348885, 4: 2349147, 11: 2349175, 4316: 2375302, 4317: 2384300, 4319: 2384484, 4327: 2384678}
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | --------------------------------------------------
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | 
[2025-10-11 15:56:33] 2025-10-11 13:55:43,458 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 15:56:33] 2025-10-11 13:55:43,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:56:33] 2025-10-11 13:55:43,480 | INFO     | job 6838063570 has completed (purged errors)
[2025-10-11 15:56:33] 2025-10-11 13:55:43,481 | INFO     | overall cleanup function is called
[2025-10-11 15:56:33] 2025-10-11 13:55:44,487 | INFO     | --- collectZombieJob: --- 10, [2733274]
[2025-10-11 15:56:33] 2025-10-11 13:55:44,487 | INFO     | zombie collector waiting for pid 2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:44,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:56:33] 2025-10-11 13:55:44,488 | INFO     | collected zombie processes
[2025-10-11 15:56:33] 2025-10-11 13:55:44,488 | INFO     | will attempt to kill all subprocesses of pid=2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:44,568 | INFO     | process IDs to be killed: [2733274] (in reverse order)
[2025-10-11 15:56:33] 2025-10-11 13:55:44,603 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:56:33] 2025-10-11 13:55:44,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:56:33] 2025-10-11 13:55:44,605 | INFO     | did not find any defunct processes belonging to 2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:44,607 | INFO     | did not find any defunct processes belonging to 2733274
[2025-10-11 15:56:33] 2025-10-11 13:55:44,607 | INFO     | ready for new job
[2025-10-11 15:56:33] 2025-10-11 13:55:44,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:56:33] 2025-10-11 13:55:44,609 | INFO     | ***************************************
[2025-10-11 15:56:33] 2025-10-11 13:55:44,609 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:56:33] 2025-10-11 13:55:44,609 | INFO     | ***************************************
[2025-10-11 15:56:33] 2025-10-11 13:55:44,609 | INFO     | 
[2025-10-11 15:56:33] 2025-10-11 13:55:44,610 | INFO     | architecture information:
[2025-10-11 15:56:33] 2025-10-11 13:55:44,610 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:56:33] 2025-10-11 13:55:44,621 | INFO     | cat /etc/os-release:
[2025-10-11 15:56:33] NAME="CentOS Linux"
[2025-10-11 15:56:33] VERSION="7 (Core)"
[2025-10-11 15:56:33] ID="centos"
[2025-10-11 15:56:33] ID_LIKE="rhel fedora"
[2025-10-11 15:56:33] VERSION_ID="7"
[2025-10-11 15:56:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:56:33] ANSI_COLOR="0;31"
[2025-10-11 15:56:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:56:33] HOME_URL="https://www.centos.org/"
[2025-10-11 15:56:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:56:33] 
[2025-10-11 15:56:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:56:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:56:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:56:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:56:33] 
[2025-10-11 15:56:33] 2025-10-11 13:55:44,621 | INFO     | ***************************************
[2025-10-11 15:56:33] 2025-10-11 13:55:45,124 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 15:56:33] 2025-10-11 13:55:45,136 | INFO     | sufficient remaining disk space (1817180110848 B)
[2025-10-11 15:56:33] 2025-10-11 13:55:45,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:56:33] 2025-10-11 13:55:45,136 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:56:33] 2025-10-11 13:55:45,136 | INFO     | update_server=False
[2025-10-11 15:56:33] 2025-10-11 13:55:45,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:56:33] 2025-10-11 13:55:45,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:56:33] 2025-10-11 13:55:45,137 | INFO     | aborting loop
[2025-10-11 15:56:33] 2025-10-11 13:55:45,684 | INFO     | all data control threads have been joined
[2025-10-11 15:56:33] 2025-10-11 13:55:45,767 | INFO     | all job control threads have been joined
[2025-10-11 15:56:33] 2025-10-11 13:55:46,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:56:33] 2025-10-11 13:55:46,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:56:33] 2025-10-11 13:55:46,142 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,142 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,195 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,261 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,520 | INFO     | all payload control threads have been joined
[2025-10-11 15:56:33] 2025-10-11 13:55:46,689 | INFO     | [data] control thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,716 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,773 | INFO     | [job] control thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,805 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:46,882 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:47,391 | INFO     | [job] validate thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:47,525 | INFO     | [payload] control thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:47,596 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:48,085 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:48,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:56:33] 2025-10-11 13:55:49,121 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:50,006 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:55:55,982 | INFO     | job.realtimelogging is not enabled
[2025-10-11 15:56:33] 2025-10-11 13:55:56,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:56:33] 2025-10-11 13:56:14,905 | INFO     | PID=2725956 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:56:33] 2025-10-11 13:56:14,905 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:56:33] 2025-10-11 13:56:14,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:56:33] 2025-10-11 13:56:14,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:56:33] 2025-10-11 13:56:27,885 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:56:33] 2025-10-11 13:56:27,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066091591488)>', '<ExcThread(monitor, started 140065560835840)>']
[2025-10-11 15:56:33] 2025-10-11 13:56:27,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:56:33] 2025-10-11 13:56:27,972 | INFO     | [monitor] control thread has ended
[2025-10-11 15:56:33] 2025-10-11 13:56:32,953 | INFO     | all workflow threads have been joined
[2025-10-11 15:56:33] 2025-10-11 13:56:32,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:56:33] 2025-10-11 13:56:32,953 | INFO     | traces error code: 0
[2025-10-11 15:56:33] 2025-10-11 13:56:32,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:56:33] 2025-10-11 13:56:33,032 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:56:33] 2025-10-11 13:56:33,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:56:33] 2025-10-11 13:56:33,037 [wrapper] pilotpid: 2725956
[2025-10-11 15:56:33] 2025-10-11 13:56:33,039 [wrapper] Pilot exit status: 0
[2025-10-11 15:56:33] 2025-10-11 13:56:33,048 [wrapper] pandaids: 6838063570
[2025-10-11 15:56:33] 2025-10-11 13:56:33,070 [wrapper] cleanup supervisor_pilot 2746591 2725957
[2025-10-11 15:56:33] 2025-10-11 13:56:33,072 [wrapper] Test setup, not cleaning
[2025-10-11 15:56:33] 2025-10-11 13:56:33,074 [wrapper] apfmon messages muted
[2025-10-11 15:56:33] 2025-10-11 13:56:33,076 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:56:33] 2025-10-11 13:56:33,078 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:56:33]  *** Error codes and diagnostics ***
[2025-10-11 15:56:33]     "exeErrorCode": 0,
[2025-10-11 15:56:33]     "exeErrorDiag": "",
[2025-10-11 15:56:33]     "pilotErrorCode": 0,
[2025-10-11 15:56:33]     "pilotErrorDiag": "",
[2025-10-11 15:56:33]  *** Listing of results directory ***
[2025-10-11 15:56:33] total 415904
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc      5112 Oct 11 05:58 queuedata.json
[2025-10-11 15:56:33] -rwx------ 1 boinc boinc     36292 Oct 11 05:59 runpilot2-wrapper.sh
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:56:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:43 run_atlas
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:43 job.xml
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc      6294 Oct 11 14:43 init_data.xml
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc 221650956 Oct 11 14:43 EVNT.46676267._002030.pool.root.1
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:43 start_atlas.sh
[2025-10-11 15:56:33] drwxrwx--x 2 boinc boinc        68 Oct 11 14:43 shared
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc    569683 Oct 11 14:43 input.tar.gz
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:43 boinc_lockfile
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc      2550 Oct 11 14:43 pandaJob.out
[2025-10-11 15:56:33] -rw------- 1 boinc boinc    975504 Oct 11 14:43 agis_schedconf.cvmfs.json
[2025-10-11 15:56:33] -rw------- 1 boinc boinc   1560580 Oct 11 14:43 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:56:33] drwx------ 5 boinc boinc      4096 Oct 11 14:43 pilot3
[2025-10-11 15:56:33] -rw------- 1 boinc boinc 198336402 Oct 11 15:55 HITS.46676269._050447.pool.root.1
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc       530 Oct 11 15:55 boinc_task_state.xml
[2025-10-11 15:56:33] -rw------- 1 boinc boinc        95 Oct 11 15:55 pilot_heartbeat.json
[2025-10-11 15:56:33] -rw------- 1 boinc boinc      1014 Oct 11 15:55 memory_monitor_summary.json
[2025-10-11 15:56:33] -rw------- 1 boinc boinc    373094 Oct 11 15:55 log.46676269._050447.job.log.tgz.1
[2025-10-11 15:56:33] -rw------- 1 boinc boinc      7788 Oct 11 15:55 heartbeat.json
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:56 wrapper_checkpoint.txt
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:56 boinc_mmap_file
[2025-10-11 15:56:33] -rw------- 1 boinc boinc      4822 Oct 11 15:56 pilotlog.txt
[2025-10-11 15:56:33] -rw------- 1 boinc boinc    629509 Oct 11 15:56 log.46676269._050447.job.log.1
[2025-10-11 15:56:33] -rw------- 1 boinc boinc       357 Oct 11 15:56 output.list
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:56 runtime_log
[2025-10-11 15:56:33] -rw------- 1 boinc boinc   1024000 Oct 11 15:56 result.tar.gz
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc      8727 Oct 11 15:56 runtime_log.err
[2025-10-11 15:56:33] -rw------- 1 boinc boinc       657 Oct 11 15:56 8aJNDmDwfR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi4QMDmEgkrpm.diag
[2025-10-11 15:56:33] -rw-r--r-- 1 boinc boinc     22037 Oct 11 15:56 stderr.txt
[2025-10-11 15:56:33] HITS file was successfully produced:
[2025-10-11 15:56:33] -rw------- 1 boinc boinc 198336402 Oct 11 15:55 shared/HITS.pool.root.1
[2025-10-11 15:56:33]  *** Contents of shared directory: ***
[2025-10-11 15:56:33] total 411724
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc 221650956 Oct 11 14:43 ATLAS.root_0
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:43 start_atlas.sh
[2025-10-11 15:56:33] -rw-r--r-- 2 boinc boinc    569683 Oct 11 14:43 input.tar.gz
[2025-10-11 15:56:33] -rw------- 1 boinc boinc 198336402 Oct 11 15:55 HITS.pool.root.1
[2025-10-11 15:56:33] -rw------- 1 boinc boinc   1024000 Oct 11 15:56 result.tar.gz
15:56:34 (2722195): run_atlas exited; CPU time 46595.068580
15:56:34 (2722195): called boinc_finish(0)

</stderr_txt>
]]>

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