Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:15 (4182081): wrapper (7.7.26015): starting
12:27:15 (4182081): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 12:27:15] Arguments: --nthreads 6
[2025-10-14 12:27:15] Threads: 6
[2025-10-14 12:27:15] Checking for CVMFS
[2025-10-14 12:27:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 12:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 12:27:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 12:27:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 12:27:16] 2.13.1.0 3910062 428 61728 151683 1 186 30766584 52428800 600 130560 0 833489 99.993 20031 148 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 12:27:16] CVMFS is ok
[2025-10-14 12:27:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 12:27:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 12:27:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 12:27:16] Further information can be found at the LHC@home message board.
[2025-10-14 12:27:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 12:27:16] Checking for apptainer binary...
[2025-10-14 12:27:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 12:27:16] Running /usr/bin/apptainer --version
[2025-10-14 12:27:16] apptainer version 1.4.1-1.el9
[2025-10-14 12:27:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 12:27:16] Atto003
[2025-10-14 12:27:16] apptainer works
[2025-10-14 12:27:16] Set ATHENA_PROC_NUMBER=6
[2025-10-14 12:27:16] Set ATHENA_CORE_NUMBER=6
[2025-10-14 12:27:16] Starting ATLAS job with PandaID=6838119501
[2025-10-14 12:27:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 13:51:37]  *** The last 200 lines of the pilot log: ***
[2025-10-14 13:51:37]  replicas=None
[2025-10-14 13:51:37]  scope=mc23_13p6TeV
[2025-10-14 13:51:37]  status=None
[2025-10-14 13:51:37]  status_code=0
[2025-10-14 13:51:37]  storage_token=
[2025-10-14 13:51:37]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6838119501/log.46676269._052851.job.log.tgz.1
[2025-10-14 13:51:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/7b/log.46676269._052851.job.log.tgz.1
[2025-10-14 13:51:37]  workdir=None
[2025-10-14 13:51:37] ]
[2025-10-14 13:51:37] 2025-10-14 04:50:36,791 | INFO     | transferring file log.46676269._052851.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838119501/log.46676269._052851.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 13:51:37] 2025-10-14 04:50:36,791 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838119501/log.46676269._052851.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._052851.job
[2025-10-14 13:51:37] 2025-10-14 04:50:36,798 | INFO     | adding to output.list: log.46676269._052851.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/7b/log.46676269._052851.job.log.tg
[2025-10-14 13:51:37] 2025-10-14 04:50:36,798 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 13:51:37] 2025-10-14 04:50:36,798 | INFO     | summary of transferred files:
[2025-10-14 13:51:37] 2025-10-14 04:50:36,798 | INFO     |  -- lfn=log.46676269._052851.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 13:51:37] 2025-10-14 04:50:36,798 | INFO     | stage-out finished correctly
[2025-10-14 13:51:37] 2025-10-14 04:50:36,826 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 13:51:37] 2025-10-14 04:50:37,199 | INFO     | time since job start (4992s) is within the limit (172800.0s)
[2025-10-14 13:51:37] 2025-10-14 04:50:38,049 | WARNING  | process 4192614 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 13:51:37] 2025-10-14 04:50:38,049 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838119501/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 13:51:37] 2025-10-14 04:50:38,069 | INFO     | job 6838119501 has state=finished
[2025-10-14 13:51:37] 2025-10-14 04:50:38,069 | INFO     | preparing for final server update for job 6838119501 in state='finished'
[2025-10-14 13:51:37] 2025-10-14 04:50:38,070 | INFO     | this job has now completed (state=finished)
[2025-10-14 13:51:37] 2025-10-14 04:50:38,070 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 13:51:37] 2025-10-14 04:50:38,070 | INFO     | log transfer has been attempted: DONE
[2025-10-14 13:51:37] 2025-10-14 04:50:38,070 | INFO     | job 6838119501 has finished - writing final server update
[2025-10-14 13:51:37] 2025-10-14 04:50:38,070 | INFO     | total number of processed events: 400 (read)
[2025-10-14 13:51:37] 2025-10-14 04:50:38,071 | INFO     | executing command: lscpu
[2025-10-14 13:51:37] 2025-10-14 04:50:38,081 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 13:51:37] 2025-10-14 04:50:38,098 | INFO     | number of running child processes to parent process 4192614: 1
[2025-10-14 13:51:37] 2025-10-14 04:50:38,098 | INFO     | maximum number of monitored processes: 6
[2025-10-14 13:51:37] 2025-10-14 04:50:39,204 | INFO     | time since job start (4994s) is within the limit (172800.0s)
[2025-10-14 13:51:37] 2025-10-14 04:50:40,601 | INFO     | monitor loop #383: job 0:6838119501 is in state 'finished'
[2025-10-14 13:51:37] 2025-10-14 04:50:40,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 13:51:37] 2025-10-14 04:50:41,209 | INFO     | time since job start (4996s) is within the limit (172800.0s)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,644 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 13:51:37] 2025-10-14 04:50:42,645 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3696.785375
[2025-10-14 13:51:37] 2025-10-14 04:50:42,646 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838119501/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,646 | INFO     | extracted standard info from prmon json
[2025-10-14 13:51:37] 2025-10-14 04:50:42,646 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 13:51:37] 2025-10-14 04:50:42,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | fitting pss+swap vs Time
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | sum of square deviations: 130793150.0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | sum of deviations: -7876182140.0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | mean x: 1760415028.0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | mean y: 2543110.1333333333
[2025-10-14 13:51:37] 2025-10-14 04:50:42,647 | INFO     | -- intersect: 106012295169.17618
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | intersect: 106012295169.17618
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | chi2: 0.04114352676983995
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | -- intersect: 106012295169.17618
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | current memory leak: -60.22 B/s (using 75 data points, chi2=0.04)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | could have reported an average CPU frequency of 3962 MHz (6 samples)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | ..............................
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . Timing measurements:
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . get job = 0 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . initial setup = 3 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . payload setup = 4 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . stage-in = 0 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . payload execution = 4967 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . stage-out = 0 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | . log creation = 0 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,648 | INFO     | ..............................
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | 
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | job summary report
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | --------------------------------------------------
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | PanDA job id: 6838119501
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | task id: 46676269
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | errors: (none)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | pilot state: finished 
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | transexitcode: 0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | exeerrorcode: 0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | exeerrordiag: 
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | exitcode: 0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | exitmsg: OK
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | cpuconsumptiontime: 27811 s
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | nevents: 400
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | neventsw: 0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | pid: 4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | pgrp: 4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | corecount: 6
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | event service: False
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4975: 2375513, 4976: 2384567, 4982: 2384705}
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | --------------------------------------------------
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | 
[2025-10-14 13:51:37] 2025-10-14 04:50:42,677 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | job 6838119501 has completed (purged errors)
[2025-10-14 13:51:37] 2025-10-14 04:50:42,685 | INFO     | overall cleanup function is called
[2025-10-14 13:51:37] 2025-10-14 04:50:43,689 | INFO     | --- collectZombieJob: --- 10, [4192614]
[2025-10-14 13:51:37] 2025-10-14 04:50:43,689 | INFO     | zombie collector waiting for pid 4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:43,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 13:51:37] 2025-10-14 04:50:43,690 | INFO     | collected zombie processes
[2025-10-14 13:51:37] 2025-10-14 04:50:43,690 | INFO     | will attempt to kill all subprocesses of pid=4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:43,733 | INFO     | process IDs to be killed: [4192614] (in reverse order)
[2025-10-14 13:51:37] 2025-10-14 04:50:43,753 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 13:51:37] 2025-10-14 04:50:43,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 13:51:37] 2025-10-14 04:50:43,755 | INFO     | did not find any defunct processes belonging to 4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | did not find any defunct processes belonging to 4192614
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | ready for new job
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | ***************************************
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | ***************************************
[2025-10-14 13:51:37] 2025-10-14 04:50:43,756 | INFO     | 
[2025-10-14 13:51:37] 2025-10-14 04:50:43,757 | INFO     | architecture information:
[2025-10-14 13:51:37] 2025-10-14 04:50:43,757 | INFO     | executing command: cat /etc/os-release
[2025-10-14 13:51:37] 2025-10-14 04:50:43,762 | INFO     | cat /etc/os-release:
[2025-10-14 13:51:37] NAME="CentOS Linux"
[2025-10-14 13:51:37] VERSION="7 (Core)"
[2025-10-14 13:51:37] ID="centos"
[2025-10-14 13:51:37] ID_LIKE="rhel fedora"
[2025-10-14 13:51:37] VERSION_ID="7"
[2025-10-14 13:51:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 13:51:37] ANSI_COLOR="0;31"
[2025-10-14 13:51:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 13:51:37] HOME_URL="https://www.centos.org/"
[2025-10-14 13:51:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 13:51:37] 
[2025-10-14 13:51:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 13:51:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 13:51:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 13:51:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 13:51:37] 
[2025-10-14 13:51:37] 2025-10-14 04:50:43,762 | INFO     | ***************************************
[2025-10-14 13:51:37] 2025-10-14 04:50:44,265 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 13:51:37] 2025-10-14 04:50:44,287 | INFO     | sufficient remaining disk space (110596456448 B)
[2025-10-14 13:51:37] 2025-10-14 04:50:44,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 13:51:37] 2025-10-14 04:50:44,288 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 13:51:37] 2025-10-14 04:50:44,288 | INFO     | update_server=False
[2025-10-14 13:51:37] 2025-10-14 04:50:44,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 13:51:37] 2025-10-14 04:50:44,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:51:37] 2025-10-14 04:50:44,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:51:37] 2025-10-14 04:50:44,290 | INFO     | aborting loop
[2025-10-14 13:51:37] 2025-10-14 04:50:44,379 | INFO     | all payload control threads have been joined
[2025-10-14 13:51:37] 2025-10-14 04:50:44,775 | INFO     | all data control threads have been joined
[2025-10-14 13:51:37] 2025-10-14 04:50:44,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 13:51:37] 2025-10-14 04:50:44,904 | INFO     | all job control threads have been joined
[2025-10-14 13:51:37] 2025-10-14 04:50:45,294 | INFO     | [job] retrieve thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,295 | INFO     | [job] queue monitor thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,296 | INFO     | [job] job monitor thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,385 | INFO     | [payload] control thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,449 | INFO     | [data] copytool_in thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,538 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,781 | INFO     | [data] control thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,909 | INFO     | [job] control thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:45,981 | INFO     | [payload] failed_post thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:46,463 | INFO     | [payload] validate_post thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:46,486 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:46,549 | INFO     | [job] validate thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:46,727 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:46,841 | INFO     | [data] copytool_out thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:47,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 13:51:37] 2025-10-14 04:50:51,367 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:50:55,023 | INFO     | job.realtimelogging is not enabled
[2025-10-14 13:51:37] 2025-10-14 04:50:56,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 13:51:37] 2025-10-14 04:51:14,357 | INFO     | PID=4185874 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 13:51:37] 2025-10-14 04:51:14,357 | INFO     | .. there are 2 such processes running
[2025-10-14 13:51:37] 2025-10-14 04:51:14,358 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 13:51:37] 2025-10-14 04:51:14,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 13:51:37] 2025-10-14 04:51:14,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 13:51:37] 2025-10-14 04:51:32,775 | INFO     | [monitor] cgroup control has ended
[2025-10-14 13:51:37] 2025-10-14 04:51:32,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434300331840)>', '<ExcThread(monitor, started 140433636169472)>']
[2025-10-14 13:51:37] 2025-10-14 04:51:33,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 13:51:37] 2025-10-14 04:51:33,450 | INFO     | [monitor] control thread has ended
[2025-10-14 13:51:37] 2025-10-14 04:51:37,810 | INFO     | all workflow threads have been joined
[2025-10-14 13:51:37] 2025-10-14 04:51:37,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 13:51:37] 2025-10-14 04:51:37,811 | INFO     | traces error code: 0
[2025-10-14 13:51:37] 2025-10-14 04:51:37,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 13:51:37] 2025-10-14 04:51:37,850 [wrapper] ==== pilot stdout END ====
[2025-10-14 13:51:37] 2025-10-14 04:51:37,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 13:51:37] 2025-10-14 04:51:37,852 [wrapper] pilotpid: 4185874
[2025-10-14 13:51:37] 2025-10-14 04:51:37,853 [wrapper] Pilot exit status: 0
[2025-10-14 13:51:37] 2025-10-14 04:51:37,857 [wrapper] pandaids: 6838119501
[2025-10-14 13:51:37] 2025-10-14 04:51:37,870 [wrapper] cleanup supervisor_pilot   15997 4185875
[2025-10-14 13:51:37] 2025-10-14 04:51:37,871 [wrapper] Test setup, not cleaning
[2025-10-14 13:51:37] 2025-10-14 04:51:37,872 [wrapper] apfmon messages muted
[2025-10-14 13:51:37] 2025-10-14 04:51:37,873 [wrapper] ==== wrapper stdout END ====
[2025-10-14 13:51:37] 2025-10-14 04:51:37,874 [wrapper] ==== wrapper stderr END ====
[2025-10-14 13:51:37]  *** Error codes and diagnostics ***
[2025-10-14 13:51:37]     "exeErrorCode": 0,
[2025-10-14 13:51:37]     "exeErrorDiag": "",
[2025-10-14 13:51:37]     "pilotErrorCode": 0,
[2025-10-14 13:51:37]     "pilotErrorDiag": "",
[2025-10-14 13:51:37]  *** Listing of results directory ***
[2025-10-14 13:51:37] total 414264
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc    557409 Oct 11 15:35 pilot3.tar.gz
[2025-10-14 13:51:37] -rwx------. 1 boinc boinc     36292 Oct 11 15:44 runpilot2-wrapper.sh
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc      5112 Oct 11 15:44 queuedata.json
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc       100 Oct 14 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 13:51:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 12:27 run_atlas
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc       105 Oct 14 12:27 job.xml
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc      9345 Oct 14 12:27 init_data.xml
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc 219501730 Oct 14 12:27 EVNT.46676267._002124.pool.root.1
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc     15120 Oct 14 12:27 start_atlas.sh
[2025-10-14 13:51:37] drwxrwx--x. 2 boinc boinc        68 Oct 14 12:27 shared
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc    569678 Oct 14 12:27 input.tar.gz
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc         0 Oct 14 12:27 boinc_lockfile
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc      2550 Oct 14 12:27 pandaJob.out
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc    972807 Oct 14 12:27 agis_schedconf.cvmfs.json
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc   1560580 Oct 14 12:27 agis_ddmendpoints.agis.ALL.json
[2025-10-14 13:51:37] drwx------. 5 boinc boinc      4096 Oct 14 12:27 pilot3
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc 198736276 Oct 14 13:50 HITS.46676269._052851.pool.root.1
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc      1017 Oct 14 13:50 memory_monitor_summary.json
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc       529 Oct 14 13:50 boinc_task_state.xml
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc    295015 Oct 14 13:50 log.46676269._052851.job.log.tgz.1
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc      7771 Oct 14 13:50 heartbeat.json
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc        95 Oct 14 13:51 pilot_heartbeat.json
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc        27 Oct 14 13:51 wrapper_checkpoint.txt
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc      8192 Oct 14 13:51 boinc_mmap_file
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc      4896 Oct 14 13:51 pilotlog.txt
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc    743617 Oct 14 13:51 log.46676269._052851.job.log.1
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc       357 Oct 14 13:51 output.list
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc       620 Oct 14 13:51 runtime_log
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc   1054720 Oct 14 13:51 result.tar.gz
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc      8651 Oct 14 13:51 runtime_log.err
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc       638 Oct 14 13:51 6RyNDmCWiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhefNDmsh5JEm.diag
[2025-10-14 13:51:37] -rw-r--r--. 1 boinc boinc     21858 Oct 14 13:51 stderr.txt
[2025-10-14 13:51:37] HITS file was successfully produced:
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc 198736276 Oct 14 13:50 shared/HITS.pool.root.1
[2025-10-14 13:51:37]  *** Contents of shared directory: ***
[2025-10-14 13:51:37] total 410048
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc 219501730 Oct 14 12:27 ATLAS.root_0
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc     15120 Oct 14 12:27 start_atlas.sh
[2025-10-14 13:51:37] -rw-r--r--. 2 boinc boinc    569678 Oct 14 12:27 input.tar.gz
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc 198736276 Oct 14 13:50 HITS.pool.root.1
[2025-10-14 13:51:37] -rw-------. 1 boinc boinc   1054720 Oct 14 13:51 result.tar.gz
13:51:39 (4182081): run_atlas exited; CPU time 27863.593163
13:51:39 (4182081): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN