Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:59:53 (2856725): wrapper (7.7.26015): starting
01:59:53 (2856725): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 01:59:53] Arguments: --nthreads 12
[2025-10-11 01:59:53] Threads: 12
[2025-10-11 01:59:53] Checking for CVMFS
[2025-10-11 01:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 01:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 01:59:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 01:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 01:59:54] 2.11.5.0 2582 29808 210364 151577 0 289 34017052 45568000 25658 130560 0 317965588 99.884 115534697 8664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 01:59:54] CVMFS is ok
[2025-10-11 01:59:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 01:59:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 01:59:54] Further information can be found at the LHC@home message board.
[2025-10-11 01:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 01:59:54] Checking for apptainer binary...
[2025-10-11 01:59:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 01:59:54] Running /usr/bin/apptainer --version
[2025-10-11 01:59:54] apptainer version 1.4.1-1.el9
[2025-10-11 01:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 01:59:54] wns0047.triumf.lcg
[2025-10-11 01:59:54] apptainer works
[2025-10-11 01:59:54] Set ATHENA_PROC_NUMBER=12
[2025-10-11 01:59:54] Set ATHENA_CORE_NUMBER=12
[2025-10-11 01:59:54] Starting ATLAS job with PandaID=6838119197
[2025-10-11 01:59:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:05:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | WARNING  | wrong length of table data, x=[1760173331.0], y=[1495.0] (must be same and length>=4)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . Timing measurements:
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . get job = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . initial setup = 4 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload setup = 26 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-in = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload execution = 56 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-out = 1 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . log creation = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838119197/pilotlog.txt
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | monitor loop #84: job 0:6838119197 is in state 'failed'
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,658 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 02:05:48] - Log from pilotlog.txt -
[2025-10-11 02:05:48] 2025-10-11 09:05:13,463 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 02:05:48] 2025-10-11 09:05:13,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 02:05:48] 2025-10-11 09:05:13,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:05:48] 2025-10-11 09:05:13,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | WARNING  | wrong length of table data, x=[1760173331.0], y=[1495.0] (must be same and length>=4)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . Timing measurements:
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . get job = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . initial setup = 4 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload setup = 26 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-in = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload execution = 56 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-out = 1 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . log creation = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838119197/pilotlog.txt
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | monitor loop #84: job 0:6838119197 is in state 'failed'
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,659 | WARNING  | 
[2025-10-11 02:05:48] [begin log extracts]
[2025-10-11 02:05:48] - Log from pilotlog.txt -
[2025-10-11 02:05:48] 2025-10-11 09:05:13,463 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 02:05:48] 2025-10-11 09:05:13,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 02:05:48] 2025-10-11 09:05:13,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:05:48] 2025-10-11 09:05:13,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | WARNING  | wrong length of table data, x=[1760173331.0], y=[1495.0] (must be same and length>=4)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . Timing measurements:
[2025-10-11 02:05:48] 2025-10-11 09:05:13,508 | INFO     | . get job = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . initial setup = 4 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload setup = 26 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-in = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . payload execution = 56 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . stage-out = 1 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | . log creation = 0 s
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | ..............................
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 02:05:48] 2025-10-11 09:05:13,509 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838119197/pilotlog.txt
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | monitor loop #84: job 0:6838119197 is in state 'failed'
[2025-10-11 02:05:48] 2025-10-11 09:05:13,588 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 02:05:48] [end log extracts]
[2025-10-11 02:05:48] 2025-10-11 09:05:13,659 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 02:05:48] 2025-10-11 09:05:13,660 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | 
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | job summary report
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | --------------------------------------------------
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | PanDA job id: 6838119197
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | task id: 46676269
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 02:02:39,559 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | pilot state: failed 
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | transexitcode: 65
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | exeerrorcode: 65
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 02:05:48] 2025-10-11 09:05:14,203 | INFO     | exitcode: 65
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | nevents: 0
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | neventsw: 0
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | pid: 2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | pgrp: 2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | corecount: 12
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | event service: False
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 27: 2349256, 35: 2349412, 86: 2372614, 87: 2372590, 89: 2376910, 92: 2376938, 232: 2377384}
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | --------------------------------------------------
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | 
[2025-10-11 02:05:48] 2025-10-11 09:05:14,204 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 02:05:48] 2025-10-11 09:05:14,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:05:48] 2025-10-11 09:05:14,314 | INFO     | job 6838119197 has completed (purged errors)
[2025-10-11 02:05:48] 2025-10-11 09:05:14,315 | INFO     | overall cleanup function is called
[2025-10-11 02:05:48] 2025-10-11 09:05:15,321 | INFO     | --- collectZombieJob: --- 10, [2868034]
[2025-10-11 02:05:48] 2025-10-11 09:05:15,321 | INFO     | zombie collector waiting for pid 2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:15,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:05:48] 2025-10-11 09:05:15,321 | INFO     | collected zombie processes
[2025-10-11 02:05:48] 2025-10-11 09:05:15,321 | INFO     | will attempt to kill all subprocesses of pid=2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:16,266 | INFO     | process IDs to be killed: [2868034] (in reverse order)
[2025-10-11 02:05:48] 2025-10-11 09:05:16,427 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:05:48] 2025-10-11 09:05:16,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:05:48] 2025-10-11 09:05:16,447 | INFO     | did not find any defunct processes belonging to 2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:16,470 | INFO     | did not find any defunct processes belonging to 2868034
[2025-10-11 02:05:48] 2025-10-11 09:05:16,470 | INFO     | ready for new job
[2025-10-11 02:05:48] 2025-10-11 09:05:16,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:05:48] 2025-10-11 09:05:16,471 | INFO     | ***************************************
[2025-10-11 02:05:48] 2025-10-11 09:05:16,472 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:05:48] 2025-10-11 09:05:16,472 | INFO     | ***************************************
[2025-10-11 02:05:48] 2025-10-11 09:05:16,472 | INFO     | 
[2025-10-11 02:05:48] 2025-10-11 09:05:16,478 | INFO     | architecture information:
[2025-10-11 02:05:48] 2025-10-11 09:05:16,478 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:05:48] 2025-10-11 09:05:16,570 | INFO     | cat /etc/os-release:
[2025-10-11 02:05:48] NAME="CentOS Linux"
[2025-10-11 02:05:48] VERSION="7 (Core)"
[2025-10-11 02:05:48] ID="centos"
[2025-10-11 02:05:48] ID_LIKE="rhel fedora"
[2025-10-11 02:05:48] VERSION_ID="7"
[2025-10-11 02:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:05:48] ANSI_COLOR="0;31"
[2025-10-11 02:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:05:48] HOME_URL="https://www.centos.org/"
[2025-10-11 02:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:05:48] 
[2025-10-11 02:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:05:48] 
[2025-10-11 02:05:48] 2025-10-11 09:05:16,570 | INFO     | ***************************************
[2025-10-11 02:05:48] 2025-10-11 09:05:17,074 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 02:05:48] 2025-10-11 09:05:17,147 | INFO     | sufficient remaining disk space (1830009438208 B)
[2025-10-11 02:05:48] 2025-10-11 09:05:17,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:05:48] 2025-10-11 09:05:17,148 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:05:48] 2025-10-11 09:05:17,148 | INFO     | update_server=False
[2025-10-11 02:05:48] 2025-10-11 09:05:17,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:05:48] 2025-10-11 09:05:17,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:05:48] 2025-10-11 09:05:17,149 | INFO     | aborting loop
[2025-10-11 02:05:48] 2025-10-11 09:05:17,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:05:48] 2025-10-11 09:05:17,295 | INFO     | all job control threads have been joined
[2025-10-11 02:05:48] 2025-10-11 09:05:17,378 | INFO     | all payload control threads have been joined
[2025-10-11 02:05:48] 2025-10-11 09:05:18,126 | INFO     | all data control threads have been joined
[2025-10-11 02:05:48] 2025-10-11 09:05:18,154 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,155 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,203 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,301 | INFO     | [job] control thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,384 | INFO     | [payload] control thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,445 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,643 | INFO     | [job] validate thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,662 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:18,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:05:48] 2025-10-11 09:05:19,132 | INFO     | [data] control thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:19,173 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:19,214 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:19,609 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:19,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:19,865 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:20,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:05:48] 2025-10-11 09:05:24,386 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:05:48] 2025-10-11 09:05:26,657 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:05:48] 2025-10-11 09:05:28,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053222020928)>', '<ExcThread(monitor, started 140052675933952)>']
[2025-10-11 02:05:48] 2025-10-11 09:05:33,615 | INFO     | all workflow threads have been joined
[2025-10-11 02:05:48] 2025-10-11 09:05:33,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:05:48] 2025-10-11 09:05:33,615 | INFO     | traces error code: 0
[2025-10-11 02:05:48] 2025-10-11 09:05:33,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:05:48] 2025-10-11 09:05:46,967 | INFO     | PID=2860988 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 02:05:48] 2025-10-11 09:05:46,967 | INFO     | .. there are 42 such processes running
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 02:05:48] 2025-10-11 09:05:46,968 | INFO     | [monitor] control thread has ended
[2025-10-11 02:05:48] 2025-10-11 09:05:47,612 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:05:48] 2025-10-11 09:05:47,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:05:48] 2025-10-11 09:05:47,781 [wrapper] pilotpid: 2860988
[2025-10-11 02:05:48] 2025-10-11 09:05:47,796 [wrapper] Pilot exit status: 0
[2025-10-11 02:05:48] 2025-10-11 09:05:47,858 [wrapper] pandaids: 6838119197
[2025-10-11 02:05:48] 2025-10-11 09:05:47,941 [wrapper] cleanup supervisor_pilot 2860994 2860989
[2025-10-11 02:05:48] 2025-10-11 09:05:47,947 [wrapper] Test setup, not cleaning
[2025-10-11 02:05:48] 2025-10-11 09:05:47,952 [wrapper] apfmon messages muted
[2025-10-11 02:05:48] 2025-10-11 09:05:47,954 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:05:48] 2025-10-11 09:05:47,956 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:05:48]  *** Error codes and diagnostics ***
[2025-10-11 02:05:48]     "exeErrorCode": 65,
[2025-10-11 02:05:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 02:05:48]     "pilotErrorCode": 1305,
[2025-10-11 02:05:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 02:05:48]  *** Listing of results directory ***
[2025-10-11 02:05:48] total 221976
[2025-10-11 02:05:48] -rwx------. 1 boinc boinc     36292 Oct 10 23:35 runpilot2-wrapper.sh
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc      5112 Oct 10 23:35 queuedata.json
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc    557409 Oct 10 23:35 pilot3.tar.gz
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc       100 Oct 11 01:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:05:48] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 01:59 run_atlas
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc       105 Oct 11 01:59 job.xml
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc      6594 Oct 11 01:59 init_data.xml
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc 223169839 Oct 11 01:59 EVNT.46676267._002113.pool.root.1
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:59 start_atlas.sh
[2025-10-11 02:05:48] drwxrwx--x. 2 boinc boinc      4096 Oct 11 01:59 shared
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc    569673 Oct 11 01:59 input.tar.gz
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc         0 Oct 11 01:59 boinc_lockfile
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc      2550 Oct 11 01:59 pandaJob.out
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc    975509 Oct 11 02:00 agis_schedconf.cvmfs.json
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc   1560580 Oct 11 02:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:05:48] drwx------. 5 boinc boinc      4096 Oct 11 02:00 pilot3
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc       953 Oct 11 02:02 memory_monitor_summary.json
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc     22328 Oct 11 02:02 log.46676269._052585.job.log.tgz.1
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc      8389 Oct 11 02:05 heartbeat.json
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc      8192 Oct 11 02:05 boinc_mmap_file
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc        22 Oct 11 02:05 wrapper_checkpoint.txt
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc        95 Oct 11 02:05 pilot_heartbeat.json
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc       893 Oct 11 02:05 pilotlog.txt
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc       523 Oct 11 02:05 boinc_task_state.xml
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc     95717 Oct 11 02:05 log.46676269._052585.job.log.1
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc       188 Oct 11 02:05 output.list
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc       620 Oct 11 02:05 runtime_log
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc    133120 Oct 11 02:05 result.tar.gz
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc      8528 Oct 11 02:05 runtime_log.err
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc       645 Oct 11 02:05 n02NDmoNiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqNRMDmri0OMn.diag
[2025-10-11 02:05:48] -rw-r--r--. 1 boinc boinc     21872 Oct 11 02:05 stderr.txt
[2025-10-11 02:05:48] No HITS result produced
[2025-10-11 02:05:48]  *** Contents of shared directory: ***
[2025-10-11 02:05:48] total 218652
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc 223169839 Oct 11 01:59 ATLAS.root_0
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:59 start_atlas.sh
[2025-10-11 02:05:48] -rw-r--r--. 2 boinc boinc    569673 Oct 11 01:59 input.tar.gz
[2025-10-11 02:05:48] -rw-------. 1 boinc boinc    133120 Oct 11 02:05 result.tar.gz
02:05:50 (2856725): run_atlas exited; CPU time 30.314847
02:05:50 (2856725): called boinc_finish(0)

</stderr_txt>
]]>

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