Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:19:28 (7708): wrapper (7.7.26015): starting
06:19:28 (7708): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 06:19:28] Arguments: --nthreads 8
[2025-10-11 06:19:28] Threads: 8
[2025-10-11 06:19:28] Checking for CVMFS
[2025-10-11 06:19:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:19:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:19:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:19:30] 2.13.2.0 6268 4111 112948 151581 3 64 22603041 40960000 22932 16776704 0 9864517 99.924 2143506 36710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 06:19:30] CVMFS is ok
[2025-10-11 06:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:19:30] Further information can be found at the LHC@home message board.
[2025-10-11 06:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:19:30] Checking for apptainer binary...
[2025-10-11 06:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:19:30] Running /usr/bin/apptainer --version
[2025-10-11 06:19:31] apptainer version 1.4.3-1.el9
[2025-10-11 06:19:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:19:31] c-211-35-1.aglt2.org
[2025-10-11 06:19:31] apptainer works
[2025-10-11 06:19:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 06:19:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 06:19:32] Starting ATLAS job with PandaID=6838001297
[2025-10-11 06:19:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:19:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:19:52] 2025-10-11 16:19:03,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:19:52] 2025-10-11 16:19:03,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:19:52] 2025-10-11 16:19:03,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:19:52] 2025-10-11 16:19:03,915 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:19:52] 2025-10-11 16:19:03,916 | INFO     | sum of square deviations: 13181271102.269346
[2025-10-11 12:19:52] 2025-10-11 16:19:03,924 | INFO     | sum of deviations: -28025633023.01434
[2025-10-11 12:19:52] 2025-10-11 16:19:03,924 | INFO     | mean x: 1760188862.5530086
[2025-10-11 12:19:52] 2025-10-11 16:19:03,924 | INFO     | mean y: 2510759.1088825213
[2025-10-11 12:19:52] 2025-10-11 16:19:03,924 | INFO     | -- intersect: 3744972827.476075
[2025-10-11 12:19:52] 2025-10-11 16:19:03,925 | INFO     | intersect: 3744972827.476075
[2025-10-11 12:19:52] 2025-10-11 16:19:03,925 | INFO     | chi2: 4.702409254929423
[2025-10-11 12:19:52] 2025-10-11 16:19:03,926 | INFO     | sum of square deviations: 12622818785.05808
[2025-10-11 12:19:52] 2025-10-11 16:19:03,933 | INFO     | sum of deviations: 16294901274.709284
[2025-10-11 12:19:52] 2025-10-11 16:19:03,934 | INFO     | mean x: 1760188710.0523255
[2025-10-11 12:19:52] 2025-10-11 16:19:03,934 | INFO     | mean y: 2522758.238372093
[2025-10-11 12:19:52] 2025-10-11 16:19:03,934 | INFO     | -- intersect: -2269719420.2766347
[2025-10-11 12:19:52] 2025-10-11 16:19:03,934 | INFO     | intersect: -2269719420.2766347
[2025-10-11 12:19:52] 2025-10-11 16:19:03,939 | INFO     | chi2: 3.350620380138247
[2025-10-11 12:19:52] 2025-10-11 16:19:03,940 | INFO     | current chi2=3.350620380138247 (change=28.746729633838825 %)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,941 | INFO     | sum of square deviations: 12080345539.94691
[2025-10-11 12:19:52] 2025-10-11 16:19:03,949 | INFO     | sum of deviations: 15993720053.20354
[2025-10-11 12:19:52] 2025-10-11 16:19:03,950 | INFO     | mean x: 1760188557.5486727
[2025-10-11 12:19:52] 2025-10-11 16:19:03,950 | INFO     | mean y: 2522673.563421829
[2025-10-11 12:19:52] 2025-10-11 16:19:03,950 | INFO     | -- intersect: -2327871182.903149
[2025-10-11 12:19:52] 2025-10-11 16:19:03,950 | INFO     | intersect: -2327871182.903149
[2025-10-11 12:19:52] 2025-10-11 16:19:03,951 | INFO     | chi2: 3.3511408955690616
[2025-10-11 12:19:52] 2025-10-11 16:19:03,951 | INFO     | current chi2=3.3511408955690616 (change=-0.015534897176065508 %)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,951 | INFO     | right removable region: 338
[2025-10-11 12:19:52] 2025-10-11 16:19:03,952 | INFO     | sum of square deviations: 12622785600.837173
[2025-10-11 12:19:52] 2025-10-11 16:19:03,960 | INFO     | sum of deviations: -120518201302.31398
[2025-10-11 12:19:52] 2025-10-11 16:19:03,960 | INFO     | mean x: 1760189015.0581396
[2025-10-11 12:19:52] 2025-10-11 16:19:03,960 | INFO     | mean y: 2535959.9156976743
[2025-10-11 12:19:52] 2025-10-11 16:19:03,960 | INFO     | -- intersect: 16808241194.490017
[2025-10-11 12:19:52] 2025-10-11 16:19:03,960 | INFO     | intersect: 16808241194.490017
[2025-10-11 12:19:52] 2025-10-11 16:19:03,965 | INFO     | chi2: 1.9827831921888015
[2025-10-11 12:19:52] 2025-10-11 16:19:03,966 | INFO     | current chi2=1.9827831921888015 (change=57.834737797219645 %)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,966 | INFO     | sum of square deviations: 12080342611.628323
[2025-10-11 12:19:52] 2025-10-11 16:19:03,974 | INFO     | sum of deviations: -137752907488.06207
[2025-10-11 12:19:52] 2025-10-11 16:19:03,974 | INFO     | mean x: 1760189167.557522
[2025-10-11 12:19:52] 2025-10-11 16:19:03,975 | INFO     | mean y: 2540791.592920354
[2025-10-11 12:19:52] 2025-10-11 16:19:03,975 | INFO     | -- intersect: 20074088706.68615
[2025-10-11 12:19:52] 2025-10-11 16:19:03,975 | INFO     | intersect: 20074088706.68615
[2025-10-11 12:19:52] 2025-10-11 16:19:03,976 | INFO     | chi2: 1.8431641933006642
[2025-10-11 12:19:52] 2025-10-11 16:19:03,976 | INFO     | current chi2=1.8431641933006642 (change=7.04156659377425 %)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,976 | INFO     | left removable region: 20
[2025-10-11 12:19:52] 2025-10-11 16:19:03,981 | INFO     | sum of square deviations: 9971510172.98116
[2025-10-11 12:19:52] 2025-10-11 16:19:03,984 | INFO     | sum of deviations: -73067021669.96223
[2025-10-11 12:19:52] 2025-10-11 16:19:03,990 | INFO     | mean x: 1760189137.0566037
[2025-10-11 12:19:52] 2025-10-11 16:19:03,990 | INFO     | mean y: 2548157.220125786
[2025-10-11 12:19:52] 2025-10-11 16:19:03,990 | INFO     | -- intersect: 12900471900.910818
[2025-10-11 12:19:52] 2025-10-11 16:19:03,990 | INFO     | intersect: 12900471900.910818
[2025-10-11 12:19:52] 2025-10-11 16:19:03,991 | INFO     | chi2: 0.39282616992355696
[2025-10-11 12:19:52] 2025-10-11 16:19:03,991 | INFO     | -- intersect: 12900471900.910818
[2025-10-11 12:19:52] 2025-10-11 16:19:03,991 | INFO     | current memory leak: -7.33 B/s (using 318 data points, chi2=0.39)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,992 | INFO     | could have reported an average CPU frequency of 2511 MHz (15 samples)
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | ..............................
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . Timing measurements:
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . get job = 0 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . initial setup = 10 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . payload setup = 52 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . stage-in = 0 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,993 | INFO     | . payload execution = 21277 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,998 | INFO     | . stage-out = 8 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,998 | INFO     | . log creation = 1 s
[2025-10-11 12:19:52] 2025-10-11 16:19:03,998 | INFO     | ..............................
[2025-10-11 12:19:52] 2025-10-11 16:19:04,250 | INFO     | 
[2025-10-11 12:19:52] 2025-10-11 16:19:04,254 | INFO     | job summary report
[2025-10-11 12:19:52] 2025-10-11 16:19:04,254 | INFO     | --------------------------------------------------
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | PanDA job id: 6838001297
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | task id: 46676269
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | errors: (none)
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | pilot state: finished 
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | transexitcode: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | exeerrorcode: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:04,255 | INFO     | exeerrordiag: 
[2025-10-11 12:19:52] 2025-10-11 16:19:04,262 | INFO     | exitcode: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:04,262 | INFO     | exitmsg: OK
[2025-10-11 12:19:52] 2025-10-11 16:19:04,262 | INFO     | cpuconsumptiontime: 52837 s
[2025-10-11 12:19:52] 2025-10-11 16:19:04,262 | INFO     | nevents: 400
[2025-10-11 12:19:52] 2025-10-11 16:19:04,262 | INFO     | neventsw: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | pid: 23926
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | pgrp: 23926
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | corecount: 8
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | event service: False
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | sizes: {0: 2348579, 1: 2348635, 2: 2348691, 3: 2348691, 4: 2348890, 15: 2348890, 27: 2349046, 38: 2349074, 44: 2349364, 50: 2349392, 21337: 2382813, 21338: 2383092
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | --------------------------------------------------
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | 
[2025-10-11 12:19:52] 2025-10-11 16:19:04,263 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 12:19:52] 2025-10-11 16:19:04,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | job 6838001297 has completed (purged errors)
[2025-10-11 12:19:52] 2025-10-11 16:19:04,357 | INFO     | overall cleanup function is called
[2025-10-11 12:19:52] 2025-10-11 16:19:05,395 | INFO     | --- collectZombieJob: --- 10, [23926]
[2025-10-11 12:19:52] 2025-10-11 16:19:05,395 | INFO     | zombie collector waiting for pid 23926
[2025-10-11 12:19:52] 2025-10-11 16:19:05,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:19:52] 2025-10-11 16:19:05,395 | INFO     | collected zombie processes
[2025-10-11 12:19:52] 2025-10-11 16:19:05,395 | INFO     | will attempt to kill all subprocesses of pid=23926
[2025-10-11 12:19:52] 2025-10-11 16:19:07,463 | INFO     | process IDs to be killed: [23926] (in reverse order)
[2025-10-11 12:19:52] 2025-10-11 16:19:07,599 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:19:52] 2025-10-11 16:19:07,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:19:52] 2025-10-11 16:19:07,659 | INFO     | did not find any defunct processes belonging to 23926
[2025-10-11 12:19:52] 2025-10-11 16:19:07,676 | INFO     | did not find any defunct processes belonging to 23926
[2025-10-11 12:19:52] 2025-10-11 16:19:07,677 | INFO     | ready for new job
[2025-10-11 12:19:52] 2025-10-11 16:19:07,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:19:52] 2025-10-11 16:19:07,681 | INFO     | ***************************************
[2025-10-11 12:19:52] 2025-10-11 16:19:07,683 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:19:52] 2025-10-11 16:19:07,683 | INFO     | ***************************************
[2025-10-11 12:19:52] 2025-10-11 16:19:07,684 | INFO     | 
[2025-10-11 12:19:52] 2025-10-11 16:19:07,689 | INFO     | architecture information:
[2025-10-11 12:19:52] 2025-10-11 16:19:07,690 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:19:52] 2025-10-11 16:19:07,719 | INFO     | cat /etc/os-release:
[2025-10-11 12:19:52] NAME="CentOS Linux"
[2025-10-11 12:19:52] VERSION="7 (Core)"
[2025-10-11 12:19:52] ID="centos"
[2025-10-11 12:19:52] ID_LIKE="rhel fedora"
[2025-10-11 12:19:52] VERSION_ID="7"
[2025-10-11 12:19:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:19:52] ANSI_COLOR="0;31"
[2025-10-11 12:19:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:19:52] HOME_URL="https://www.centos.org/"
[2025-10-11 12:19:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:19:52] 
[2025-10-11 12:19:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:19:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:19:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:19:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:19:52] 
[2025-10-11 12:19:52] 2025-10-11 16:19:07,719 | INFO     | ***************************************
[2025-10-11 12:19:52] 2025-10-11 16:19:08,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 12:19:52] 2025-10-11 16:19:08,388 | INFO     | sufficient remaining disk space (128027983872 B)
[2025-10-11 12:19:52] 2025-10-11 16:19:08,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:19:52] 2025-10-11 16:19:08,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:19:52] 2025-10-11 16:19:08,389 | INFO     | update_server=False
[2025-10-11 12:19:52] 2025-10-11 16:19:08,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:19:52] 2025-10-11 16:19:08,563 | INFO     | all job control threads have been joined
[2025-10-11 12:19:52] 2025-10-11 16:19:08,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:19:52] 2025-10-11 16:19:08,625 | INFO     | aborting loop
[2025-10-11 12:19:52] 2025-10-11 16:19:09,074 | INFO     | all data control threads have been joined
[2025-10-11 12:19:52] 2025-10-11 16:19:09,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:19:52] 2025-10-11 16:19:09,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:19:52] 2025-10-11 16:19:09,396 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:09,478 | INFO     | all payload control threads have been joined
[2025-10-11 12:19:52] 2025-10-11 16:19:09,571 | INFO     | [job] control thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:09,631 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:09,818 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:09,852 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:09,853 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,080 | INFO     | [data] control thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,199 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,301 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,484 | INFO     | [payload] control thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:19:52] 2025-10-11 16:19:10,696 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,734 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,736 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:10,849 | INFO     | [job] validate thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:11,261 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:14,682 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:19:52] 2025-10-11 16:19:38,175 | INFO     | PID=13078 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 12:19:52] 2025-10-11 16:19:38,175 | INFO     | .. there are 16 such processes running
[2025-10-11 12:19:52] 2025-10-11 16:19:38,176 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:19:52] 2025-10-11 16:19:38,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:19:52] 2025-10-11 16:19:38,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:19:52] 2025-10-11 16:19:42,131 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:19:52] 2025-10-11 16:19:43,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433642301248)>', '<ExcThread(monitor, started 140432856041216)>']
[2025-10-11 12:19:52] 2025-10-11 16:19:44,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:19:52] 2025-10-11 16:19:44,215 | INFO     | [monitor] control thread has ended
[2025-10-11 12:19:52] 2025-10-11 16:19:48,879 | INFO     | all workflow threads have been joined
[2025-10-11 12:19:52] 2025-10-11 16:19:48,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:19:52] 2025-10-11 16:19:48,891 | INFO     | traces error code: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:48,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:19:52] 2025-10-11 16:19:50,581 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:19:52] 2025-10-11 16:19:50,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:19:52] 2025-10-11 16:19:50,645 [wrapper] pilotpid: 13078
[2025-10-11 12:19:52] 2025-10-11 16:19:50,767 [wrapper] Pilot exit status: 0
[2025-10-11 12:19:52] 2025-10-11 16:19:50,945 [wrapper] pandaids: 6838001297
[2025-10-11 12:19:52] 2025-10-11 16:19:51,329 [wrapper] cleanup supervisor_pilot  657308 13079
[2025-10-11 12:19:52] 2025-10-11 16:19:51,396 [wrapper] Test setup, not cleaning
[2025-10-11 12:19:52] 2025-10-11 16:19:51,417 [wrapper] apfmon messages muted
[2025-10-11 12:19:52] 2025-10-11 16:19:51,447 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:19:52] 2025-10-11 16:19:51,451 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:19:52]  *** Error codes and diagnostics ***
[2025-10-11 12:19:52]     "exeErrorCode": 0,
[2025-10-11 12:19:52]     "exeErrorDiag": "",
[2025-10-11 12:19:52]     "pilotErrorCode": 0,
[2025-10-11 12:19:52]     "pilotErrorDiag": "",
[2025-10-11 12:19:52]  *** Listing of results directory ***
[2025-10-11 12:19:52] total 415128
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 23:42 pilot3.tar.gz
[2025-10-11 12:19:52] -rwx------. 1 boincer umatlas     36292 Oct 10 23:44 runpilot2-wrapper.sh
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 23:44 queuedata.json
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:19:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 06:19 run_atlas
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 06:19 job.xml
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas 221580791 Oct 11 06:19 EVNT.46676267._002029.pool.root.1
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 06:19 input.tar.gz
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:19 start_atlas.sh
[2025-10-11 12:19:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 06:19 shared
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 06:19 boinc_lockfile
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 06:19 pandaJob.out
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas    975517 Oct 11 06:20 agis_schedconf.cvmfs.json
[2025-10-11 12:19:52] drwx------. 5 boincer umatlas      4096 Oct 11 06:21 pilot3
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas      6858 Oct 11 12:13 init_data.xml
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas 193435550 Oct 11 12:16 HITS.46676269._050409.pool.root.1
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas       531 Oct 11 12:16 boinc_task_state.xml
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas      1046 Oct 11 12:18 memory_monitor_summary.json
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 12:18 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas    544540 Oct 11 12:18 log.46676269._050409.job.log.tgz.1
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas        95 Oct 11 12:18 pilot_heartbeat.json
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas      7833 Oct 11 12:19 heartbeat.json
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 12:19 boinc_mmap_file
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas        28 Oct 11 12:19 wrapper_checkpoint.txt
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas      4823 Oct 11 12:19 pilotlog.txt
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas   2542400 Oct 11 12:19 log.46676269._050409.job.log.1
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas       357 Oct 11 12:19 output.list
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 12:19 runtime_log
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas   3102720 Oct 11 12:19 result.tar.gz
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas       658 Oct 11 12:19 tVdKDmrhfR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmb4QMDmNNRLEm.diag
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 12:19 runtime_log.err
[2025-10-11 12:19:52] -rw-r--r--. 1 boincer umatlas     21003 Oct 11 12:19 stderr.txt
[2025-10-11 12:19:52] HITS file was successfully produced:
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas 193435550 Oct 11 12:16 shared/HITS.pool.root.1
[2025-10-11 12:19:52]  *** Contents of shared directory: ***
[2025-10-11 12:19:52] total 408908
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas 221580791 Oct 11 06:19 ATLAS.root_0
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 06:19 input.tar.gz
[2025-10-11 12:19:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:19 start_atlas.sh
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas 193435550 Oct 11 12:16 HITS.pool.root.1
[2025-10-11 12:19:52] -rw-------. 1 boincer umatlas   3102720 Oct 11 12:19 result.tar.gz
12:19:53 (7708): run_atlas exited; CPU time 53676.757315
12:19:53 (7708): called boinc_finish(0)

</stderr_txt>
]]>

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