Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:44:51 (7448): wrapper (7.7.26015): starting
04:44:51 (7448): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 04:44:51] Arguments: --nthreads 8
[2025-10-11 04:44:51] Threads: 8
[2025-10-11 04:44:51] Checking for CVMFS
[2025-10-11 04:44:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:44:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:44:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:44:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:44:51] 2.11.2.0 4697 51201 115008 151577 2 188 13236395 18432001 1833 130560 0 45998917 99.974 2339560 39900 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 04:44:51] CVMFS is ok
[2025-10-11 04:44:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:44:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:44:51] Further information can be found at the LHC@home message board.
[2025-10-11 04:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:44:51] Checking for apptainer binary...
[2025-10-11 04:44:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:44:51] Running /usr/bin/apptainer --version
[2025-10-11 04:44:51] apptainer version 1.3.2-1.el7
[2025-10-11 04:44:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:44:52] c-206-21.aglt2.org
[2025-10-11 04:44:52] apptainer works
[2025-10-11 04:44:52] Set ATHENA_PROC_NUMBER=8
[2025-10-11 04:44:52] Set ATHENA_CORE_NUMBER=8
[2025-10-11 04:44:52] Starting ATLAS job with PandaID=6837732756
[2025-10-11 04:44:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:47:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:47:26] 2025-10-11 11:46:43,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:47:26] 2025-10-11 11:46:43,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:47:26] 2025-10-11 11:46:43,138 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:47:26] 2025-10-11 11:46:43,139 | INFO     | sum of square deviations: 1778377530.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,140 | INFO     | sum of deviations: 15617719467.999996
[2025-10-11 07:47:26] 2025-10-11 11:46:43,141 | INFO     | mean x: 1760177757.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,141 | INFO     | mean y: 2446992.189944134
[2025-10-11 07:47:26] 2025-10-11 11:46:43,141 | INFO     | -- intersect: -15455441987.457401
[2025-10-11 07:47:26] 2025-10-11 11:46:43,141 | INFO     | intersect: -15455441987.457401
[2025-10-11 07:47:26] 2025-10-11 11:46:43,142 | INFO     | chi2: 2.334641593908018
[2025-10-11 07:47:26] 2025-10-11 11:46:43,142 | INFO     | sum of square deviations: 1633472487.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,143 | INFO     | sum of deviations: 26894152750.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,144 | INFO     | mean x: 1760177604.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,144 | INFO     | mean y: 2458569.9770114943
[2025-10-11 07:47:26] 2025-10-11 11:46:43,144 | INFO     | -- intersect: -28977818554.251003
[2025-10-11 07:47:26] 2025-10-11 11:46:43,144 | INFO     | intersect: -28977818554.251003
[2025-10-11 07:47:26] 2025-10-11 11:46:43,145 | INFO     | chi2: 1.5140754545414083
[2025-10-11 07:47:26] 2025-10-11 11:46:43,145 | INFO     | current chi2=1.5140754545414083 (change=35.14741369757926 %)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,145 | INFO     | sum of square deviations: 1496660620.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,147 | INFO     | sum of deviations: 25796261513.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,147 | INFO     | mean x: 1760177452.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,147 | INFO     | mean y: 2457345.8579881657
[2025-10-11 07:47:26] 2025-10-11 11:46:43,147 | INFO     | -- intersect: -30335748426.588947
[2025-10-11 07:47:26] 2025-10-11 11:46:43,147 | INFO     | intersect: -30335748426.588947
[2025-10-11 07:47:26] 2025-10-11 11:46:43,148 | INFO     | chi2: 1.5153280992051745
[2025-10-11 07:47:26] 2025-10-11 11:46:43,148 | INFO     | current chi2=1.5153280992051745 (change=-0.08273330500200111 %)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,148 | INFO     | right removable region: 168
[2025-10-11 07:47:26] 2025-10-11 11:46:43,149 | INFO     | sum of square deviations: 1633472487.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,150 | INFO     | sum of deviations: -12659109332.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,150 | INFO     | mean x: 1760177909.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,150 | INFO     | mean y: 2476418.040229885
[2025-10-11 07:47:26] 2025-10-11 11:46:43,150 | INFO     | -- intersect: 13643529310.895758
[2025-10-11 07:47:26] 2025-10-11 11:46:43,151 | INFO     | intersect: 13643529310.895758
[2025-10-11 07:47:26] 2025-10-11 11:46:43,151 | INFO     | chi2: 0.8876128126727227
[2025-10-11 07:47:26] 2025-10-11 11:46:43,151 | INFO     | current chi2=0.8876128126727227 (change=61.98076762665209 %)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,152 | INFO     | sum of square deviations: 1496660620.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,153 | INFO     | sum of deviations: -15455104387.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,153 | INFO     | mean x: 1760178062.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,153 | INFO     | mean y: 2479477.230769231
[2025-10-11 07:47:26] 2025-10-11 11:46:43,154 | INFO     | -- intersect: 18178768292.73883
[2025-10-11 07:47:26] 2025-10-11 11:46:43,154 | INFO     | intersect: 18178768292.73883
[2025-10-11 07:47:26] 2025-10-11 11:46:43,154 | INFO     | chi2: 0.8606815506123403
[2025-10-11 07:47:26] 2025-10-11 11:46:43,154 | INFO     | current chi2=0.8606815506123403 (change=3.034122725120286 %)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,155 | INFO     | left removable region: 20
[2025-10-11 07:47:26] 2025-10-11 11:46:43,155 | INFO     | sum of square deviations: 1005179777.0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,156 | INFO     | sum of deviations: -1975847583.9999998
[2025-10-11 07:47:26] 2025-10-11 11:46:43,156 | INFO     | mean x: 1760178031.5
[2025-10-11 07:47:26] 2025-10-11 11:46:43,156 | INFO     | mean y: 2489355.621621622
[2025-10-11 07:47:26] 2025-10-11 11:46:43,157 | INFO     | -- intersect: 3462411242.7579865
[2025-10-11 07:47:26] 2025-10-11 11:46:43,157 | INFO     | intersect: 3462411242.7579865
[2025-10-11 07:47:26] 2025-10-11 11:46:43,157 | INFO     | chi2: 0.011282050422642334
[2025-10-11 07:47:26] 2025-10-11 11:46:43,157 | INFO     | -- intersect: 3462411242.7579865
[2025-10-11 07:47:26] 2025-10-11 11:46:43,158 | INFO     | current memory leak: -1.97 B/s (using 148 data points, chi2=0.01)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,158 | INFO     | could have reported an average CPU frequency of 2552 MHz (9 samples)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | ..............................
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | . Timing measurements:
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | . get job = 0 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | . initial setup = 2 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | . payload setup = 4 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,159 | INFO     | . stage-in = 0 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,160 | INFO     | . payload execution = 10865 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,160 | INFO     | . stage-out = 1 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,160 | INFO     | . log creation = 0 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,160 | INFO     | ..............................
[2025-10-11 07:47:26] 2025-10-11 11:46:43,261 | INFO     | 
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | job summary report
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | --------------------------------------------------
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | PanDA job id: 6837732756
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | task id: 46676269
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | errors: (none)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | pilot state: finished 
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | transexitcode: 0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | exeerrorcode: 0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | exeerrordiag: 
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | exitcode: 0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,263 | INFO     | exitmsg: OK
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | cpuconsumptiontime: 81991 s
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | nevents: 400
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | neventsw: 0
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | pid: 17753
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | pgrp: 17753
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | corecount: 8
[2025-10-11 07:47:26] 2025-10-11 11:46:43,264 | INFO     | event service: False
[2025-10-11 07:47:26] 2025-10-11 11:46:43,265 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 5: 2349175, 13: 2349231, 10874: 2378461, 10876: 2387459, 10878: 2387515, 10884: 2387773}
[2025-10-11 07:47:26] 2025-10-11 11:46:43,265 | INFO     | --------------------------------------------------
[2025-10-11 07:47:26] 2025-10-11 11:46:43,265 | INFO     | 
[2025-10-11 07:47:26] 2025-10-11 11:46:43,265 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 07:47:26] 2025-10-11 11:46:43,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:47:26] 2025-10-11 11:46:43,291 | INFO     | job 6837732756 has completed (purged errors)
[2025-10-11 07:47:26] 2025-10-11 11:46:43,291 | INFO     | overall cleanup function is called
[2025-10-11 07:47:26] 2025-10-11 11:46:44,298 | INFO     | --- collectZombieJob: --- 10, [17753]
[2025-10-11 07:47:26] 2025-10-11 11:46:44,299 | INFO     | zombie collector waiting for pid 17753
[2025-10-11 07:47:26] 2025-10-11 11:46:44,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:47:26] 2025-10-11 11:46:44,299 | INFO     | collected zombie processes
[2025-10-11 07:47:26] 2025-10-11 11:46:44,299 | INFO     | will attempt to kill all subprocesses of pid=17753
[2025-10-11 07:47:26] 2025-10-11 11:46:44,455 | INFO     | process IDs to be killed: [17753] (in reverse order)
[2025-10-11 07:47:26] 2025-10-11 11:46:44,508 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:47:26] 2025-10-11 11:46:44,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:47:26] 2025-10-11 11:46:44,511 | INFO     | did not find any defunct processes belonging to 17753
[2025-10-11 07:47:26] 2025-10-11 11:46:44,515 | INFO     | did not find any defunct processes belonging to 17753
[2025-10-11 07:47:26] 2025-10-11 11:46:44,515 | INFO     | ready for new job
[2025-10-11 07:47:26] 2025-10-11 11:46:44,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:47:26] 2025-10-11 11:46:44,517 | INFO     | ***************************************
[2025-10-11 07:47:26] 2025-10-11 11:46:44,517 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 07:47:26] 2025-10-11 11:46:44,517 | INFO     | ***************************************
[2025-10-11 07:47:26] 2025-10-11 11:46:44,518 | INFO     | 
[2025-10-11 07:47:26] 2025-10-11 11:46:44,519 | INFO     | architecture information:
[2025-10-11 07:47:26] 2025-10-11 11:46:44,519 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:47:26] 2025-10-11 11:46:44,582 | INFO     | cat /etc/os-release:
[2025-10-11 07:47:26] NAME="CentOS Linux"
[2025-10-11 07:47:26] VERSION="7 (Core)"
[2025-10-11 07:47:26] ID="centos"
[2025-10-11 07:47:26] ID_LIKE="rhel fedora"
[2025-10-11 07:47:26] VERSION_ID="7"
[2025-10-11 07:47:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:47:26] ANSI_COLOR="0;31"
[2025-10-11 07:47:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:47:26] HOME_URL="https://www.centos.org/"
[2025-10-11 07:47:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:47:26] 
[2025-10-11 07:47:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:47:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:47:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:47:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:47:26] 
[2025-10-11 07:47:26] 2025-10-11 11:46:44,582 | INFO     | ***************************************
[2025-10-11 07:47:26] 2025-10-11 11:46:45,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 07:47:26] 2025-10-11 11:46:45,095 | INFO     | sufficient remaining disk space (28356640768 B)
[2025-10-11 07:47:26] 2025-10-11 11:46:45,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | INFO     | update_server=False
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:47:26] 2025-10-11 11:46:45,096 | INFO     | aborting loop
[2025-10-11 07:47:26] 2025-10-11 11:46:45,221 | INFO     | all job control threads have been joined
[2025-10-11 07:47:26] 2025-10-11 11:46:45,309 | INFO     | all data control threads have been joined
[2025-10-11 07:47:26] 2025-10-11 11:46:45,469 | INFO     | all payload control threads have been joined
[2025-10-11 07:47:26] 2025-10-11 11:46:45,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:47:26] 2025-10-11 11:46:46,097 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,098 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,102 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,228 | INFO     | [job] control thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,315 | INFO     | [data] control thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,387 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,475 | INFO     | [payload] control thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,797 | INFO     | [job] validate thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:46,837 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:47,014 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:47,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:47:26] 2025-10-11 11:46:47,377 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:47,462 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:47,473 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:47,796 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:51,312 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:46:55,975 | INFO     | job.realtimelogging is not enabled
[2025-10-11 07:47:26] 2025-10-11 11:46:56,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:47:26] 2025-10-11 11:47:14,771 | INFO     | PID=11140 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 07:47:26] 2025-10-11 11:47:14,772 | INFO     | .. there are 3 such processes running
[2025-10-11 07:47:26] 2025-10-11 11:47:14,772 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:47:26] 2025-10-11 11:47:14,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:47:26] 2025-10-11 11:47:14,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:47:26] 2025-10-11 11:47:20,569 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:47:26] 2025-10-11 11:47:20,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302854952768)>', '<ExcThread(monitor, started 140302278977280)>']
[2025-10-11 07:47:26] 2025-10-11 11:47:20,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:47:26] 2025-10-11 11:47:20,805 | INFO     | [monitor] control thread has ended
[2025-10-11 07:47:26] 2025-10-11 11:47:25,672 | INFO     | all workflow threads have been joined
[2025-10-11 07:47:26] 2025-10-11 11:47:25,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:47:26] 2025-10-11 11:47:25,673 | INFO     | traces error code: 0
[2025-10-11 07:47:26] 2025-10-11 11:47:25,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:47:26] 2025-10-11 11:47:25,813 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:47:26] 2025-10-11 11:47:25,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:47:26] 2025-10-11 11:47:25,818 [wrapper] pilotpid: 11140
[2025-10-11 07:47:26] 2025-10-11 11:47:25,821 [wrapper] Pilot exit status: 0
[2025-10-11 07:47:26] 2025-10-11 11:47:25,831 [wrapper] pandaids: 6837732756
[2025-10-11 07:47:26] 2025-10-11 11:47:25,881 [wrapper] cleanup supervisor_pilot  7136 11141
[2025-10-11 07:47:26] 2025-10-11 11:47:25,884 [wrapper] Test setup, not cleaning
[2025-10-11 07:47:26] 2025-10-11 11:47:25,886 [wrapper] apfmon messages muted
[2025-10-11 07:47:26] 2025-10-11 11:47:25,889 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:47:26] 2025-10-11 11:47:25,891 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:47:26]  *** Error codes and diagnostics ***
[2025-10-11 07:47:26]     "exeErrorCode": 0,
[2025-10-11 07:47:26]     "exeErrorDiag": "",
[2025-10-11 07:47:26]     "pilotErrorCode": 0,
[2025-10-11 07:47:26]     "pilotErrorDiag": "",
[2025-10-11 07:47:26]  *** Listing of results directory ***
[2025-10-11 07:47:26] total 413644
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 16:36 queuedata.json
[2025-10-11 07:47:26] -rwx------ 1 boincer umatlas     36292 Oct 10 16:37 runpilot2-wrapper.sh
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas       100 Oct 11 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:47:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 04:44 run_atlas
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas       105 Oct 11 04:44 job.xml
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas 219611811 Oct 11 04:44 EVNT.46676267._001807.pool.root.1
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:44 start_atlas.sh
[2025-10-11 07:47:26] drwxrwx--x 2 boincer umatlas      4096 Oct 11 04:44 shared
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas    576715 Oct 11 04:44 input.tar.gz
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas         0 Oct 11 04:44 boinc_lockfile
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 04:44 pandaJob.out
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas    975509 Oct 11 04:45 agis_schedconf.cvmfs.json
[2025-10-11 07:47:26] drwx------ 4 boincer umatlas      4096 Oct 11 04:45 pilot3
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 07:45 init_data.xml
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas 196177799 Oct 11 07:45 HITS.46676269._044656.pool.root.1
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas       531 Oct 11 07:46 boinc_task_state.xml
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas      1054 Oct 11 07:46 memory_monitor_summary.json
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas   1560580 Oct 11 07:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas    416443 Oct 11 07:46 log.46676269._044656.job.log.tgz.1
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas      7856 Oct 11 07:46 heartbeat.json
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 07:47 boinc_mmap_file
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas        28 Oct 11 07:47 wrapper_checkpoint.txt
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas        95 Oct 11 07:47 pilot_heartbeat.json
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas      4893 Oct 11 07:47 pilotlog.txt
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas   1516556 Oct 11 07:47 log.46676269._044656.job.log.1
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas       357 Oct 11 07:47 output.list
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas       620 Oct 11 07:47 runtime_log
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas   1955840 Oct 11 07:47 result.tar.gz
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas       661 Oct 11 07:47 urGMDmv2YR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgMeNDmjfowRm.diag
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 07:47 runtime_log.err
[2025-10-11 07:47:26] -rw-r--r-- 1 boincer umatlas     20880 Oct 11 07:47 stderr.txt
[2025-10-11 07:47:26] HITS file was successfully produced:
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas 196177799 Oct 11 07:45 shared/HITS.pool.root.1
[2025-10-11 07:47:26]  *** Contents of shared directory: ***
[2025-10-11 07:47:26] total 408544
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas 219611811 Oct 11 04:44 ATLAS.root_0
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:44 start_atlas.sh
[2025-10-11 07:47:26] -rw-r--r-- 2 boincer umatlas    576715 Oct 11 04:44 input.tar.gz
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas 196177799 Oct 11 07:45 HITS.pool.root.1
[2025-10-11 07:47:26] -rw------- 1 boincer umatlas   1955840 Oct 11 07:47 result.tar.gz
07:47:27 (7448): run_atlas exited; CPU time 82099.871891
07:47:27 (7448): called boinc_finish(0)

</stderr_txt>
]]>

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