Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:06:38 (2552061): wrapper (7.7.26015): starting
11:06:38 (2552061): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 11:06:38] Arguments: --nthreads 8
[2025-10-11 11:06:38] Threads: 8
[2025-10-11 11:06:38] Checking for CVMFS
[2025-10-11 11:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 11:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 11:06:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 11:06:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 11:06:39] 2.13.2.0 2033853 1937 49556 151581 0 57 2265449 4096001 0 130560 1 1365835 99.988 68107 367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 11:06:39] CVMFS is ok
[2025-10-11 11:06:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 11:06:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 11:06:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 11:06:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 11:06:39] Further information can be found at the LHC@home message board.
[2025-10-11 11:06:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 11:06:39] Checking for apptainer binary...
[2025-10-11 11:06:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 11:06:39] Running /usr/bin/apptainer --version
[2025-10-11 11:06:39] apptainer version 1.4.3
[2025-10-11 11:06:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 11:06:39] lab01ubuntu
[2025-10-11 11:06:39] apptainer works
[2025-10-11 11:06:39] Set ATHENA_PROC_NUMBER=8
[2025-10-11 11:06:39] Set ATHENA_CORE_NUMBER=8
[2025-10-11 11:06:39] Starting ATLAS job with PandaID=6837931759
[2025-10-11 11:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:48:27]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:48:27] 2025-10-11 12:47:12,582 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837931759/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:48:27] 2025-10-11 12:47:12,667 | INFO     | number of running child processes to parent process 2562195: 1
[2025-10-11 12:48:27] 2025-10-11 12:47:12,667 | INFO     | maximum number of monitored processes: 6
[2025-10-11 12:48:27] 2025-10-11 12:47:13,656 | INFO     | time since job start (6001s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:14,893 | INFO     | job 6837931759 has state=finished
[2025-10-11 12:48:27] 2025-10-11 12:47:14,894 | INFO     | preparing for final server update for job 6837931759 in state='finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:14,895 | INFO     | this job has now completed (state=finished)
[2025-10-11 12:48:27] 2025-10-11 12:47:14,895 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 12:48:27] 2025-10-11 12:47:14,896 | INFO     | log transfer has been attempted: DONE
[2025-10-11 12:48:27] 2025-10-11 12:47:14,896 | INFO     | job 6837931759 has finished - writing final server update
[2025-10-11 12:48:27] 2025-10-11 12:47:14,897 | INFO     | total number of processed events: 400 (read)
[2025-10-11 12:48:27] 2025-10-11 12:47:14,899 | INFO     | executing command: lscpu
[2025-10-11 12:48:27] 2025-10-11 12:47:14,947 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 12:48:27] 2025-10-11 12:47:15,171 | INFO     | monitor loop #459: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:15,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:15,662 | INFO     | time since job start (6003s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:16,875 | INFO     | PID=2555786 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 12:48:27] 2025-10-11 12:47:17,676 | INFO     | monitor loop #460: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:17,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:17,876 | INFO     | time since job start (6005s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:19,881 | INFO     | time since job start (6007s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:20,180 | INFO     | monitor loop #461: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:20,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:21,888 | INFO     | time since job start (6009s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:22,684 | INFO     | monitor loop #462: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:22,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:23,893 | INFO     | time since job start (6011s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:25,188 | INFO     | monitor loop #463: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:25,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:25,900 | INFO     | time since job start (6013s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:27,692 | INFO     | monitor loop #464: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:27,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:27,906 | INFO     | time since job start (6015s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:29,912 | INFO     | time since job start (6017s) is within the limit (172800.0s)
[2025-10-11 12:48:27] 2025-10-11 12:47:30,196 | INFO     | monitor loop #465: job 0:6837931759 is in state 'finished'
[2025-10-11 12:48:27] 2025-10-11 12:47:30,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,033 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 12:48:27] 2025-10-11 12:47:31,035 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-10-11 12:48:27] 2025-10-11 12:47:31,038 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837931759/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,040 | INFO     | extracted standard info from prmon json
[2025-10-11 12:48:27] 2025-10-11 12:47:31,040 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:48:27] 2025-10-11 12:47:31,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:48:27] 2025-10-11 12:47:31,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:48:27] 2025-10-11 12:47:31,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:48:27] 2025-10-11 12:47:31,047 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:48:27] 2025-10-11 12:47:31,048 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,049 | INFO     | sum of deviations: 212432133.99999994
[2025-10-11 12:48:27] 2025-10-11 12:47:31,049 | INFO     | mean x: 1760183934.0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,050 | INFO     | mean y: 2604003.7032967033
[2025-10-11 12:48:27] 2025-10-11 12:47:31,050 | INFO     | -- intersect: -1597794407.0939207
[2025-10-11 12:48:27] 2025-10-11 12:47:31,050 | INFO     | intersect: -1597794407.0939207
[2025-10-11 12:48:27] 2025-10-11 12:47:31,051 | INFO     | chi2: 0.3390088245427637
[2025-10-11 12:48:27] 2025-10-11 12:47:31,051 | INFO     | -- intersect: -1597794407.0939207
[2025-10-11 12:48:27] 2025-10-11 12:47:31,052 | INFO     | current memory leak: 0.91 B/s (using 91 data points, chi2=0.34)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,052 | INFO     | could have reported an average CPU frequency of 2893 MHz (7 samples)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,053 | INFO     | ..............................
[2025-10-11 12:48:27] 2025-10-11 12:47:31,053 | INFO     | . Timing measurements:
[2025-10-11 12:48:27] 2025-10-11 12:47:31,053 | INFO     | . get job = 0 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,054 | INFO     | . initial setup = 4 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,054 | INFO     | . payload setup = 16 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,054 | INFO     | . stage-in = 0 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,054 | INFO     | . payload execution = 5955 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,055 | INFO     | . stage-out = 1 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,055 | INFO     | . log creation = 0 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,055 | INFO     | ..............................
[2025-10-11 12:48:27] 2025-10-11 12:47:31,552 | INFO     | 
[2025-10-11 12:48:27] 2025-10-11 12:47:31,553 | INFO     | job summary report
[2025-10-11 12:48:27] 2025-10-11 12:47:31,576 | INFO     | --------------------------------------------------
[2025-10-11 12:48:27] 2025-10-11 12:47:31,577 | INFO     | PanDA job id: 6837931759
[2025-10-11 12:48:27] 2025-10-11 12:47:31,577 | INFO     | task id: 46676269
[2025-10-11 12:48:27] 2025-10-11 12:47:31,577 | INFO     | errors: (none)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:48:27] 2025-10-11 12:47:31,578 | INFO     | pilot state: finished 
[2025-10-11 12:48:27] 2025-10-11 12:47:31,578 | INFO     | transexitcode: 0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,578 | INFO     | exeerrorcode: 0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,579 | INFO     | exeerrordiag: 
[2025-10-11 12:48:27] 2025-10-11 12:47:31,579 | INFO     | exitcode: 0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,579 | INFO     | exitmsg: OK
[2025-10-11 12:48:27] 2025-10-11 12:47:31,580 | INFO     | cpuconsumptiontime: 43005 s
[2025-10-11 12:48:27] 2025-10-11 12:47:31,580 | INFO     | nevents: 400
[2025-10-11 12:48:27] 2025-10-11 12:47:31,580 | INFO     | neventsw: 0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,580 | INFO     | pid: 2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:31,581 | INFO     | pgrp: 2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:31,581 | INFO     | corecount: 8
[2025-10-11 12:48:27] 2025-10-11 12:47:31,581 | INFO     | event service: False
[2025-10-11 12:48:27] 2025-10-11 12:47:31,582 | INFO     | sizes: {0: 2348693, 1: 2348892, 11: 2349154, 12: 2349182, 5975: 2375888, 5978: 2385084, 5997: 2385222}
[2025-10-11 12:48:27] 2025-10-11 12:47:31,582 | INFO     | --------------------------------------------------
[2025-10-11 12:48:27] 2025-10-11 12:47:31,582 | INFO     | 
[2025-10-11 12:48:27] 2025-10-11 12:47:31,583 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-11 12:48:27] 2025-10-11 12:47:31,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:48:27] 2025-10-11 12:47:31,639 | INFO     | job 6837931759 has completed (purged errors)
[2025-10-11 12:48:27] 2025-10-11 12:47:31,640 | INFO     | overall cleanup function is called
[2025-10-11 12:48:27] 2025-10-11 12:47:32,651 | INFO     | --- collectZombieJob: --- 10, [2562195]
[2025-10-11 12:48:27] 2025-10-11 12:47:32,652 | INFO     | zombie collector waiting for pid 2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:32,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:48:27] 2025-10-11 12:47:32,653 | INFO     | collected zombie processes
[2025-10-11 12:48:27] 2025-10-11 12:47:32,653 | INFO     | will attempt to kill all subprocesses of pid=2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:32,829 | INFO     | process IDs to be killed: [2562195] (in reverse order)
[2025-10-11 12:48:27] 2025-10-11 12:47:32,918 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:48:27] 2025-10-11 12:47:32,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:48:27] 2025-10-11 12:47:32,924 | INFO     | did not find any defunct processes belonging to 2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:32,929 | INFO     | did not find any defunct processes belonging to 2562195
[2025-10-11 12:48:27] 2025-10-11 12:47:32,929 | INFO     | ready for new job
[2025-10-11 12:48:27] 2025-10-11 12:47:32,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:48:27] 2025-10-11 12:47:32,933 | INFO     | ***************************************
[2025-10-11 12:48:27] 2025-10-11 12:47:32,934 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:48:27] 2025-10-11 12:47:32,934 | INFO     | ***************************************
[2025-10-11 12:48:27] 2025-10-11 12:47:32,934 | INFO     | 
[2025-10-11 12:48:27] 2025-10-11 12:47:32,936 | INFO     | pilot is running in a VM
[2025-10-11 12:48:27] 2025-10-11 12:47:32,936 | INFO     | architecture information:
[2025-10-11 12:48:27] 2025-10-11 12:47:32,937 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:48:27] 2025-10-11 12:47:32,971 | INFO     | cat /etc/os-release:
[2025-10-11 12:48:27] NAME="CentOS Linux"
[2025-10-11 12:48:27] VERSION="7 (Core)"
[2025-10-11 12:48:27] ID="centos"
[2025-10-11 12:48:27] ID_LIKE="rhel fedora"
[2025-10-11 12:48:27] VERSION_ID="7"
[2025-10-11 12:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:48:27] ANSI_COLOR="0;31"
[2025-10-11 12:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:48:27] HOME_URL="https://www.centos.org/"
[2025-10-11 12:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:48:27] 
[2025-10-11 12:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:48:27] 
[2025-10-11 12:48:27] 2025-10-11 12:47:32,972 | INFO     | ***************************************
[2025-10-11 12:48:27] 2025-10-11 12:47:33,475 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-11 12:48:27] 2025-10-11 12:47:33,512 | INFO     | sufficient remaining disk space (16998465536 B)
[2025-10-11 12:48:27] 2025-10-11 12:47:33,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:48:27] 2025-10-11 12:47:33,513 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:48:27] 2025-10-11 12:47:33,513 | INFO     | update_server=False
[2025-10-11 12:48:27] 2025-10-11 12:47:33,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:48:27] 2025-10-11 12:47:33,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:48:27] 2025-10-11 12:47:33,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:48:27] 2025-10-11 12:47:33,721 | INFO     | aborting loop
[2025-10-11 12:48:27] 2025-10-11 12:47:33,888 | INFO     | all job control threads have been joined
[2025-10-11 12:48:27] 2025-10-11 12:47:34,410 | INFO     | all data control threads have been joined
[2025-10-11 12:48:27] 2025-10-11 12:47:34,520 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,727 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,735 | INFO     | all payload control threads have been joined
[2025-10-11 12:48:27] 2025-10-11 12:47:34,879 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,894 | INFO     | [job] control thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,966 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,993 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:34,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,416 | INFO     | [data] control thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,516 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,521 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,741 | INFO     | [payload] control thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,771 | INFO     | [job] validate thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,936 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:35,968 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:36,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:48:27] 2025-10-11 12:47:36,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:48:27] 2025-10-11 12:47:37,258 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:47:40,446 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:48:27] 2025-10-11 12:48:03,134 | INFO     | PID=2555786 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 12:48:27] 2025-10-11 12:48:03,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:48:27] 2025-10-11 12:48:03,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:48:27] 2025-10-11 12:48:03,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:48:27] 2025-10-11 12:48:21,376 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:48:27] 2025-10-11 12:48:21,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132286424532800)>', '<ExcThread(monitor, started 132286144022272)>']
[2025-10-11 12:48:27] 2025-10-11 12:48:22,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:48:27] 2025-10-11 12:48:22,233 | INFO     | [monitor] control thread has ended
[2025-10-11 12:48:27] 2025-10-11 12:48:26,846 | INFO     | all workflow threads have been joined
[2025-10-11 12:48:27] 2025-10-11 12:48:26,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:48:27] 2025-10-11 12:48:26,847 | INFO     | traces error code: 0
[2025-10-11 12:48:27] 2025-10-11 12:48:26,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:48:27] 2025-10-11 12:48:27,040 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:48:27] 2025-10-11 12:48:27,049 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:48:27] 2025-10-11 12:48:27,057 [wrapper] pilotpid: 2555786
[2025-10-11 12:48:27] 2025-10-11 12:48:27,064 [wrapper] Pilot exit status: 0
[2025-10-11 12:48:27] 2025-10-11 12:48:27,093 [wrapper] pandaids: 6837931759
[2025-10-11 12:48:27] 2025-10-11 12:48:27,171 [wrapper] cleanup supervisor_pilot 2575149 2555787
[2025-10-11 12:48:27] 2025-10-11 12:48:27,180 [wrapper] Test setup, not cleaning
[2025-10-11 12:48:27] 2025-10-11 12:48:27,189 [wrapper] apfmon messages muted
[2025-10-11 12:48:27] 2025-10-11 12:48:27,198 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:48:27] 2025-10-11 12:48:27,205 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:48:27]  *** Error codes and diagnostics ***
[2025-10-11 12:48:27]     "exeErrorCode": 0,
[2025-10-11 12:48:27]     "exeErrorDiag": "",
[2025-10-11 12:48:27]     "pilotErrorCode": 0,
[2025-10-11 12:48:27]     "pilotErrorDiag": "",
[2025-10-11 12:48:27]  *** Listing of results directory ***
[2025-10-11 12:48:27] total 398844
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc    557409 Oct 11 00:56 pilot3.tar.gz
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc      5112 Oct 11 01:10 queuedata.json
[2025-10-11 12:48:27] -rwx------ 1 boinc boinc     36292 Oct 11 01:11 runpilot2-wrapper.sh
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc       100 Oct 11 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:48:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 11:06 run_atlas
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc       105 Oct 11 11:06 job.xml
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc 219046496 Oct 11 11:06 EVNT.46676267._001951.pool.root.1
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc      6315 Oct 11 11:06 init_data.xml
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 11:06 start_atlas.sh
[2025-10-11 12:48:27] drwxrwx--x 2 boinc boinc      4096 Oct 11 11:06 shared
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc    569684 Oct 11 11:06 input.tar.gz
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc         0 Oct 11 11:06 boinc_lockfile
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc      2550 Oct 11 11:06 pandaJob.out
[2025-10-11 12:48:27] -rw------- 1 boinc boinc    975517 Oct 11 11:07 agis_schedconf.cvmfs.json
[2025-10-11 12:48:27] -rw------- 1 boinc boinc   1560580 Oct 11 11:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:48:27] drwx------ 5 boinc boinc      4096 Oct 11 11:07 pilot3
[2025-10-11 12:48:27] -rw------- 1 boinc boinc 183020173 Oct 11 12:46 HITS.46676269._048379.pool.root.1
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc       529 Oct 11 12:46 boinc_task_state.xml
[2025-10-11 12:48:27] -rw------- 1 boinc boinc      1013 Oct 11 12:47 memory_monitor_summary.json
[2025-10-11 12:48:27] -rw------- 1 boinc boinc    346862 Oct 11 12:47 log.46676269._048379.job.log.tgz.1
[2025-10-11 12:48:27] -rw------- 1 boinc boinc      7757 Oct 11 12:47 heartbeat.json
[2025-10-11 12:48:27] -rw------- 1 boinc boinc        95 Oct 11 12:48 pilot_heartbeat.json
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc      8192 Oct 11 12:48 boinc_mmap_file
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc        27 Oct 11 12:48 wrapper_checkpoint.txt
[2025-10-11 12:48:27] -rw------- 1 boinc boinc      4817 Oct 11 12:48 pilotlog.txt
[2025-10-11 12:48:27] -rw------- 1 boinc boinc    876431 Oct 11 12:48 log.46676269._048379.job.log.1
[2025-10-11 12:48:27] -rw------- 1 boinc boinc       357 Oct 11 12:48 output.list
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc       620 Oct 11 12:48 runtime_log
[2025-10-11 12:48:27] -rw------- 1 boinc boinc   1239040 Oct 11 12:48 result.tar.gz
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc      8775 Oct 11 12:48 runtime_log.err
[2025-10-11 12:48:27] -rw------- 1 boinc boinc       647 Oct 11 12:48 PeHLDmkJdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTyeNDmoxQCzn.diag
[2025-10-11 12:48:27] -rw-r--r-- 1 boinc boinc     22478 Oct 11 12:48 stderr.txt
[2025-10-11 12:48:27] HITS file was successfully produced:
[2025-10-11 12:48:27] -rw------- 1 boinc boinc 183020173 Oct 11 12:46 shared/HITS.pool.root.1
[2025-10-11 12:48:27]  *** Contents of shared directory: ***
[2025-10-11 12:48:27] total 394444
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc 219046496 Oct 11 11:06 ATLAS.root_0
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 11:06 start_atlas.sh
[2025-10-11 12:48:27] -rw-r--r-- 2 boinc boinc    569684 Oct 11 11:06 input.tar.gz
[2025-10-11 12:48:27] -rw------- 1 boinc boinc 183020173 Oct 11 12:46 HITS.pool.root.1
[2025-10-11 12:48:27] -rw------- 1 boinc boinc   1239040 Oct 11 12:48 result.tar.gz
12:48:29 (2552061): run_atlas exited; CPU time 43013.296558
12:48:29 (2552061): called boinc_finish(0)

</stderr_txt>
]]>

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