Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:38:08 (27930): wrapper (7.7.26015): starting
04:38:08 (27930): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 04:38:08] Arguments: --nthreads 8
[2025-10-11 04:38:08] Threads: 8
[2025-10-11 04:38:08] Checking for CVMFS
[2025-10-11 04:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:38:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:38:08] 2.11.2.0 31396 51187 128816 151577 3 188 15828296 18432000 1531 130560 0 44635413 99.974 2195720 39360 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 04:38:08] CVMFS is ok
[2025-10-11 04:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:38:08] Further information can be found at the LHC@home message board.
[2025-10-11 04:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:38:08] Checking for apptainer binary...
[2025-10-11 04:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:38:08] Running /usr/bin/apptainer --version
[2025-10-11 04:38:08] apptainer version 1.3.2-1.el7
[2025-10-11 04:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:38:09] c-206-10.aglt2.org
[2025-10-11 04:38:09] apptainer works
[2025-10-11 04:38:09] Set ATHENA_PROC_NUMBER=8
[2025-10-11 04:38:09] Set ATHENA_CORE_NUMBER=8
[2025-10-11 04:38:09] Starting ATLAS job with PandaID=6838000744
[2025-10-11 04:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:48:45]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:48:45] 2025-10-11 11:47:45,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:48:45] 2025-10-11 11:47:45,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:48:45] 2025-10-11 11:47:46,002 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:48:45] 2025-10-11 11:47:46,002 | INFO     | sum of square deviations: 1995283922.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,003 | INFO     | sum of deviations: 25733343581.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,003 | INFO     | mean x: 1760177569.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,003 | INFO     | mean y: 2477316.0268817204
[2025-10-11 07:48:45] 2025-10-11 11:47:46,003 | INFO     | -- intersect: -22698679972.72639
[2025-10-11 07:48:45] 2025-10-11 11:47:46,004 | INFO     | intersect: -22698679972.72639
[2025-10-11 07:48:45] 2025-10-11 11:47:46,004 | INFO     | chi2: 1.328126766814464
[2025-10-11 07:48:45] 2025-10-11 11:47:46,004 | INFO     | sum of square deviations: 1838657730.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,005 | INFO     | sum of deviations: 25013001443.999996
[2025-10-11 07:48:45] 2025-10-11 11:47:46,005 | INFO     | mean x: 1760177417.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,005 | INFO     | mean y: 2476614.4751381218
[2025-10-11 07:48:45] 2025-10-11 11:47:46,005 | INFO     | -- intersect: -23942882847.895916
[2025-10-11 07:48:45] 2025-10-11 11:47:46,005 | INFO     | intersect: -23942882847.895916
[2025-10-11 07:48:45] 2025-10-11 11:47:46,006 | INFO     | chi2: 1.3288231927926182
[2025-10-11 07:48:45] 2025-10-11 11:47:46,006 | INFO     | current chi2=1.3288231927926182 (change=-0.052436709774662846 %)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,006 | INFO     | right removable region: 180
[2025-10-11 07:48:45] 2025-10-11 11:47:46,006 | INFO     | sum of square deviations: 1838657730.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,007 | INFO     | sum of deviations: -448671470.0000002
[2025-10-11 07:48:45] 2025-10-11 11:47:46,007 | INFO     | mean x: 1760177722.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,007 | INFO     | mean y: 2502510.9392265193
[2025-10-11 07:48:45] 2025-10-11 11:47:46,007 | INFO     | -- intersect: 432023195.0259769
[2025-10-11 07:48:45] 2025-10-11 11:47:46,007 | INFO     | intersect: 432023195.0259769
[2025-10-11 07:48:45] 2025-10-11 11:47:46,008 | INFO     | chi2: 0.058560858566117
[2025-10-11 07:48:45] 2025-10-11 11:47:46,008 | INFO     | current chi2=0.058560858566117 (change=95.59071769131073 %)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,008 | INFO     | sum of square deviations: 1690450300.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,009 | INFO     | sum of deviations: -5361924247.499999
[2025-10-11 07:48:45] 2025-10-11 11:47:46,009 | INFO     | mean x: 1760177874.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,009 | INFO     | mean y: 2507513.346590909
[2025-10-11 07:48:45] 2025-10-11 11:47:46,009 | INFO     | -- intersect: 5585600033.2476845
[2025-10-11 07:48:45] 2025-10-11 11:47:46,009 | INFO     | intersect: 5585600033.2476845
[2025-10-11 07:48:45] 2025-10-11 11:47:46,010 | INFO     | chi2: 0.014677658177786356
[2025-10-11 07:48:45] 2025-10-11 11:47:46,010 | INFO     | current chi2=0.014677658177786356 (change=74.9360604725171 %)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,010 | INFO     | sum of square deviations: 1550429070.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | sum of deviations: -4730041503.999997
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | mean x: 1760178027.0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | mean y: 2506821.397660819
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | -- intersect: 5372449428.406976
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | intersect: 5372449428.406976
[2025-10-11 07:48:45] 2025-10-11 11:47:46,011 | INFO     | chi2: 0.014586853172724866
[2025-10-11 07:48:45] 2025-10-11 11:47:46,012 | INFO     | current chi2=0.014586853172724866 (change=0.6186613965361161 %)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,012 | INFO     | left removable region: 30
[2025-10-11 07:48:45] 2025-10-11 11:47:46,012 | INFO     | sum of square deviations: 1046484737.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,012 | INFO     | sum of deviations: -426158230.4999992
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | mean x: 1760178301.5
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | mean y: 2501390.1
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | -- intersect: 719295857.7610577
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | intersect: 719295857.7610577
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | chi2: 0.008641967660055065
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | -- intersect: 719295857.7610577
[2025-10-11 07:48:45] 2025-10-11 11:47:46,013 | INFO     | current memory leak: -0.41 B/s (using 150 data points, chi2=0.01)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | could have reported an average CPU frequency of 2352 MHz (10 samples)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | ..............................
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . Timing measurements:
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . get job = 0 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . initial setup = 2 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . payload setup = 5 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . stage-in = 0 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,014 | INFO     | . payload execution = 11328 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,015 | INFO     | . stage-out = 2 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,015 | INFO     | . log creation = 0 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,015 | INFO     | ..............................
[2025-10-11 07:48:45] 2025-10-11 11:47:46,179 | INFO     | 
[2025-10-11 07:48:45] 2025-10-11 11:47:46,180 | INFO     | job summary report
[2025-10-11 07:48:45] 2025-10-11 11:47:46,180 | INFO     | --------------------------------------------------
[2025-10-11 07:48:45] 2025-10-11 11:47:46,180 | INFO     | PanDA job id: 6838000744
[2025-10-11 07:48:45] 2025-10-11 11:47:46,180 | INFO     | task id: 46676269
[2025-10-11 07:48:45] 2025-10-11 11:47:46,180 | INFO     | errors: (none)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | pilot state: finished 
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | transexitcode: 0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | exeerrorcode: 0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | exeerrordiag: 
[2025-10-11 07:48:45] 2025-10-11 11:47:46,181 | INFO     | exitcode: 0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | exitmsg: OK
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | cpuconsumptiontime: 84377 s
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | nevents: 400
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | neventsw: 0
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | pid: 5831
[2025-10-11 07:48:45] 2025-10-11 11:47:46,182 | INFO     | pgrp: 5831
[2025-10-11 07:48:45] 2025-10-11 11:47:46,183 | INFO     | corecount: 8
[2025-10-11 07:48:45] 2025-10-11 11:47:46,183 | INFO     | event service: False
[2025-10-11 07:48:45] 2025-10-11 11:47:46,183 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 11337: 2378533, 11338: 2378532, 11340: 2387714, 11344: 2387770, 11349: 2387964}
[2025-10-11 07:48:45] 2025-10-11 11:47:46,183 | INFO     | --------------------------------------------------
[2025-10-11 07:48:45] 2025-10-11 11:47:46,183 | INFO     | 
[2025-10-11 07:48:45] 2025-10-11 11:47:46,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 07:48:45] 2025-10-11 11:47:46,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:48:45] 2025-10-11 11:47:46,204 | INFO     | job 6838000744 has completed (purged errors)
[2025-10-11 07:48:45] 2025-10-11 11:47:46,205 | INFO     | overall cleanup function is called
[2025-10-11 07:48:45] 2025-10-11 11:47:47,211 | INFO     | --- collectZombieJob: --- 10, [5831]
[2025-10-11 07:48:45] 2025-10-11 11:47:47,212 | INFO     | zombie collector waiting for pid 5831
[2025-10-11 07:48:45] 2025-10-11 11:47:47,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:48:45] 2025-10-11 11:47:47,212 | INFO     | collected zombie processes
[2025-10-11 07:48:45] 2025-10-11 11:47:47,212 | INFO     | will attempt to kill all subprocesses of pid=5831
[2025-10-11 07:48:45] 2025-10-11 11:47:47,382 | INFO     | process IDs to be killed: [5831] (in reverse order)
[2025-10-11 07:48:45] 2025-10-11 11:47:47,442 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:48:45] 2025-10-11 11:47:47,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:48:45] 2025-10-11 11:47:47,445 | INFO     | did not find any defunct processes belonging to 5831
[2025-10-11 07:48:45] 2025-10-11 11:47:47,447 | INFO     | did not find any defunct processes belonging to 5831
[2025-10-11 07:48:45] 2025-10-11 11:47:47,448 | INFO     | ready for new job
[2025-10-11 07:48:45] 2025-10-11 11:47:47,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:48:45] 2025-10-11 11:47:47,450 | INFO     | ***************************************
[2025-10-11 07:48:45] 2025-10-11 11:47:47,450 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:48:45] 2025-10-11 11:47:47,450 | INFO     | ***************************************
[2025-10-11 07:48:45] 2025-10-11 11:47:47,450 | INFO     | 
[2025-10-11 07:48:45] 2025-10-11 11:47:47,452 | INFO     | architecture information:
[2025-10-11 07:48:45] 2025-10-11 11:47:47,452 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:48:45] 2025-10-11 11:47:47,466 | INFO     | cat /etc/os-release:
[2025-10-11 07:48:45] NAME="CentOS Linux"
[2025-10-11 07:48:45] VERSION="7 (Core)"
[2025-10-11 07:48:45] ID="centos"
[2025-10-11 07:48:45] ID_LIKE="rhel fedora"
[2025-10-11 07:48:45] VERSION_ID="7"
[2025-10-11 07:48:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:48:45] ANSI_COLOR="0;31"
[2025-10-11 07:48:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:48:45] HOME_URL="https://www.centos.org/"
[2025-10-11 07:48:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:48:45] 
[2025-10-11 07:48:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:48:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:48:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:48:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:48:45] 
[2025-10-11 07:48:45] 2025-10-11 11:47:47,466 | INFO     | ***************************************
[2025-10-11 07:48:45] 2025-10-11 11:47:47,969 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 07:48:45] 2025-10-11 11:47:47,992 | INFO     | sufficient remaining disk space (28034727936 B)
[2025-10-11 07:48:45] 2025-10-11 11:47:47,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:48:45] 2025-10-11 11:47:47,993 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:48:45] 2025-10-11 11:47:47,993 | INFO     | update_server=False
[2025-10-11 07:48:45] 2025-10-11 11:47:47,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:48:45] 2025-10-11 11:47:47,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:48:45] 2025-10-11 11:47:47,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:48:45] 2025-10-11 11:47:48,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:48:45] 2025-10-11 11:47:48,317 | INFO     | aborting loop
[2025-10-11 07:48:45] 2025-10-11 11:47:48,597 | INFO     | all job control threads have been joined
[2025-10-11 07:48:45] 2025-10-11 11:47:48,661 | INFO     | all data control threads have been joined
[2025-10-11 07:48:45] 2025-10-11 11:47:48,884 | INFO     | all payload control threads have been joined
[2025-10-11 07:48:45] 2025-10-11 11:47:48,998 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:48,999 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,122 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,322 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,501 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,530 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,603 | INFO     | [job] control thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,619 | INFO     | [job] validate thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,668 | INFO     | [data] control thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,903 | INFO     | [payload] control thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,910 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,921 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:49,998 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:50,363 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:51,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:48:45] 2025-10-11 11:47:55,266 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:47:58,611 | INFO     | job.realtimelogging is not enabled
[2025-10-11 07:48:45] 2025-10-11 11:47:59,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:48:45] 2025-10-11 11:48:19,067 | INFO     | PID=31689 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 07:48:45] 2025-10-11 11:48:19,067 | INFO     | .. there are 3 such processes running
[2025-10-11 07:48:45] 2025-10-11 11:48:19,067 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:48:45] 2025-10-11 11:48:19,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:48:45] 2025-10-11 11:48:19,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:48:45] 2025-10-11 11:48:39,928 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:48:45] 2025-10-11 11:48:40,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503655974720)>', '<ExcThread(monitor, started 140503035127552)>']
[2025-10-11 07:48:45] 2025-10-11 11:48:41,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:48:45] 2025-10-11 11:48:41,176 | INFO     | [monitor] control thread has ended
[2025-10-11 07:48:45] 2025-10-11 11:48:45,451 | INFO     | all workflow threads have been joined
[2025-10-11 07:48:45] 2025-10-11 11:48:45,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:48:45] 2025-10-11 11:48:45,451 | INFO     | traces error code: 0
[2025-10-11 07:48:45] 2025-10-11 11:48:45,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:48:45] 2025-10-11 11:48:45,578 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:48:45] 2025-10-11 11:48:45,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:48:45] 2025-10-11 11:48:45,583 [wrapper] pilotpid: 31689
[2025-10-11 07:48:45] 2025-10-11 11:48:45,585 [wrapper] Pilot exit status: 0
[2025-10-11 07:48:45] 2025-10-11 11:48:45,593 [wrapper] pandaids: 6838000744
[2025-10-11 07:48:45] 2025-10-11 11:48:45,633 [wrapper] cleanup supervisor_pilot  1990 31690
[2025-10-11 07:48:45] 2025-10-11 11:48:45,635 [wrapper] Test setup, not cleaning
[2025-10-11 07:48:45] 2025-10-11 11:48:45,638 [wrapper] apfmon messages muted
[2025-10-11 07:48:45] 2025-10-11 11:48:45,640 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:48:45] 2025-10-11 11:48:45,643 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:48:45]  *** Error codes and diagnostics ***
[2025-10-11 07:48:45]     "exeErrorCode": 0,
[2025-10-11 07:48:45]     "exeErrorDiag": "",
[2025-10-11 07:48:45]     "pilotErrorCode": 0,
[2025-10-11 07:48:45]     "pilotErrorDiag": "",
[2025-10-11 07:48:45]  *** Listing of results directory ***
[2025-10-11 07:48:45] total 418500
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 23:19 queuedata.json
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 23:19 pilot3.tar.gz
[2025-10-11 07:48:45] -rwx------ 1 boincer umatlas     36292 Oct 10 23:19 runpilot2-wrapper.sh
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas       100 Oct 11 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:48:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 04:38 run_atlas
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas       105 Oct 11 04:38 job.xml
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas 221284624 Oct 11 04:38 EVNT.46676267._002018.pool.root.1
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:38 start_atlas.sh
[2025-10-11 07:48:45] drwxrwx--x 2 boincer umatlas      4096 Oct 11 04:38 shared
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 04:38 input.tar.gz
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas         0 Oct 11 04:38 boinc_lockfile
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 04:38 pandaJob.out
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas    975509 Oct 11 04:38 agis_schedconf.cvmfs.json
[2025-10-11 07:48:45] drwx------ 5 boincer umatlas      4096 Oct 11 04:38 pilot3
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 07:39 init_data.xml
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas 199343096 Oct 11 07:47 HITS.46676269._050116.pool.root.1
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas       531 Oct 11 07:47 boinc_task_state.xml
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas        95 Oct 11 07:47 pilot_heartbeat.json
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas      1054 Oct 11 07:47 memory_monitor_summary.json
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas   1560580 Oct 11 07:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas    415869 Oct 11 07:47 log.46676269._050116.job.log.tgz.1
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas      7856 Oct 11 07:47 heartbeat.json
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 07:48 boinc_mmap_file
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas        28 Oct 11 07:48 wrapper_checkpoint.txt
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas      4893 Oct 11 07:48 pilotlog.txt
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas   1592271 Oct 11 07:48 log.46676269._050116.job.log.1
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas       357 Oct 11 07:48 output.list
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas       620 Oct 11 07:48 runtime_log
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas   2027520 Oct 11 07:48 result.tar.gz
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas       661 Oct 11 07:48 VPiKDmJKfR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuHfNDmZGl5zm.diag
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 07:48 runtime_log.err
[2025-10-11 07:48:45] -rw-r--r-- 1 boincer umatlas     20883 Oct 11 07:48 stderr.txt
[2025-10-11 07:48:45] HITS file was successfully produced:
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas 199343096 Oct 11 07:47 shared/HITS.pool.root.1
[2025-10-11 07:48:45]  *** Contents of shared directory: ***
[2025-10-11 07:48:45] total 413332
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas 221284624 Oct 11 04:38 ATLAS.root_0
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:38 start_atlas.sh
[2025-10-11 07:48:45] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 04:38 input.tar.gz
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas 199343096 Oct 11 07:47 HITS.pool.root.1
[2025-10-11 07:48:45] -rw------- 1 boincer umatlas   2027520 Oct 11 07:48 result.tar.gz
07:48:47 (27930): run_atlas exited; CPU time 84497.074761
07:48:47 (27930): called boinc_finish(0)

</stderr_txt>
]]>

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