Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:56:53 (918018): wrapper (7.7.26015): starting
05:56:53 (918018): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 05:56:53] Arguments: --nthreads 11
[2025-10-11 05:56:53] Threads: 11
[2025-10-11 05:56:53] Checking for CVMFS
[2025-10-11 05:56:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:56:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:56:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:56:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:56:54] 2.13.2.0 4120630 127671 271176 151579 3 170 19644906 32935936 18362 16776704 0 90996536 99.669 81859888 29885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 05:56:54] CVMFS is ok
[2025-10-11 05:56:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:56:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:56:54] Further information can be found at the LHC@home message board.
[2025-10-11 05:56:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:56:54] Checking for apptainer binary...
[2025-10-11 05:56:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:56:54] Running /usr/bin/apptainer --version
[2025-10-11 05:56:54] apptainer version 1.4.3-1.el9
[2025-10-11 05:56:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:56:54] c-5-4.aglt2.org
[2025-10-11 05:56:54] apptainer works
[2025-10-11 05:56:54] Set ATHENA_PROC_NUMBER=11
[2025-10-11 05:56:54] Set ATHENA_CORE_NUMBER=11
[2025-10-11 05:56:54] Starting ATLAS job with PandaID=6838001113
[2025-10-11 05:56:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:34:20]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:34:20]  replicas=None
[2025-10-11 07:34:20]  scope=mc23_13p6TeV
[2025-10-11 07:34:20]  status=None
[2025-10-11 07:34:20]  status_code=0
[2025-10-11 07:34:20]  storage_token=
[2025-10-11 07:34:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838001113/log.46676269._050225.job.log.tgz.1
[2025-10-11 07:34:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8a/log.46676269._050225.job.log.tgz.1
[2025-10-11 07:34:20]  workdir=None
[2025-10-11 07:34:20] ]
[2025-10-11 07:34:20] 2025-10-11 11:33:10,510 | INFO     | transferring file log.46676269._050225.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838001113/log.46676269._050225.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 07:34:20] 2025-10-11 11:33:10,510 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838001113/log.46676269._050225.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._050225.job
[2025-10-11 07:34:20] 2025-10-11 11:33:10,529 | INFO     | adding to output.list: log.46676269._050225.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8a/log.46676269._050225.job.log.tg
[2025-10-11 07:34:20] 2025-10-11 11:33:10,530 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:34:20] 2025-10-11 11:33:10,530 | INFO     | summary of transferred files:
[2025-10-11 07:34:20] 2025-10-11 11:33:10,530 | INFO     |  -- lfn=log.46676269._050225.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:34:20] 2025-10-11 11:33:10,530 | INFO     | stage-out finished correctly
[2025-10-11 07:34:20] 2025-10-11 11:33:11,516 | INFO     | time since job start (5766s) is within the limit (172800.0s)
[2025-10-11 07:34:20] 2025-10-11 11:33:11,516 | INFO     | 5768s have passed since pilot start - server update state is 'RUNNING'
[2025-10-11 07:34:20] 2025-10-11 11:33:12,991 | INFO     | PID=925149 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:34:20] 2025-10-11 11:33:12,991 | INFO     | .. there are 29 such processes running
[2025-10-11 07:34:20] 2025-10-11 11:33:13,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:34:20] 2025-10-11 11:33:13,440 | INFO     | job 6838001113 has state=finished
[2025-10-11 07:34:20] 2025-10-11 11:33:13,440 | INFO     | preparing for final server update for job 6838001113 in state='finished'
[2025-10-11 07:34:20] 2025-10-11 11:33:13,441 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:34:20] 2025-10-11 11:33:13,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:34:20] 2025-10-11 11:33:13,441 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:34:20] 2025-10-11 11:33:13,441 | INFO     | job 6838001113 has finished - writing final server update
[2025-10-11 07:34:20] 2025-10-11 11:33:13,442 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:34:20] 2025-10-11 11:33:13,444 | INFO     | executing command: lscpu
[2025-10-11 07:34:20] 2025-10-11 11:33:13,499 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:34:20] 2025-10-11 11:33:13,992 | INFO     | time since job start (5768s) is within the limit (172800.0s)
[2025-10-11 07:34:20] 2025-10-11 11:33:15,117 | WARNING  | process 936303 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 07:34:20] 2025-10-11 11:33:15,118 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838001113/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:34:20] 2025-10-11 11:33:15,383 | INFO     | number of running child processes to parent process 936303: 1
[2025-10-11 07:34:20] 2025-10-11 11:33:15,383 | INFO     | maximum number of monitored processes: 6
[2025-10-11 07:34:20] 2025-10-11 11:33:16,008 | INFO     | time since job start (5771s) is within the limit (172800.0s)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,562 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:34:20] 2025-10-11 11:33:17,566 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2799.9783
[2025-10-11 07:34:20] 2025-10-11 11:33:17,570 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838001113/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,570 | INFO     | extracted standard info from prmon json
[2025-10-11 07:34:20] 2025-10-11 11:33:17,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:34:20] 2025-10-11 11:33:17,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:34:20] 2025-10-11 11:33:17,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:34:20] 2025-10-11 11:33:17,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:34:20] 2025-10-11 11:33:17,573 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:34:20] 2025-10-11 11:33:17,573 | INFO     | sum of square deviations: 211281125.98863629
[2025-10-11 07:34:20] 2025-10-11 11:33:17,573 | INFO     | sum of deviations: -4684019347.352275
[2025-10-11 07:34:20] 2025-10-11 11:33:17,573 | INFO     | mean x: 1760179609.5113637
[2025-10-11 07:34:20] 2025-10-11 11:33:17,573 | INFO     | mean y: 2324235.852272727
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | -- intersect: 39024812909.1171
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | intersect: 39024812909.1171
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | chi2: 0.12571127676422333
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | -- intersect: 39024812909.1171
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | current memory leak: -22.17 B/s (using 88 data points, chi2=0.13)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | could have reported an average CPU frequency of 2697 MHz (7 samples)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | ..............................
[2025-10-11 07:34:20] 2025-10-11 11:33:17,574 | INFO     | . Timing measurements:
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . get job = 0 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . initial setup = 2 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . payload setup = 5 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . stage-in = 0 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . payload execution = 5739 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . stage-out = 0 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | . log creation = 0 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,575 | INFO     | ..............................
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | 
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | job summary report
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | --------------------------------------------------
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | PanDA job id: 6838001113
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | task id: 46676269
[2025-10-11 07:34:20] 2025-10-11 11:33:17,720 | INFO     | errors: (none)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | pilot state: finished 
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | transexitcode: 0
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | exeerrorcode: 0
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | exeerrordiag: 
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | exitcode: 0
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | exitmsg: OK
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | cpuconsumptiontime: 49197 s
[2025-10-11 07:34:20] 2025-10-11 11:33:17,721 | INFO     | nevents: 400
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | neventsw: 0
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | pid: 936303
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | pgrp: 936303
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | corecount: 11
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | event service: False
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5748: 2375961, 5749: 2384959, 5752: 2385015, 5756: 2385337}
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | --------------------------------------------------
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | 
[2025-10-11 07:34:20] 2025-10-11 11:33:17,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 07:34:20] 2025-10-11 11:33:17,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:34:20] 2025-10-11 11:33:17,743 | INFO     | job 6838001113 has completed (purged errors)
[2025-10-11 07:34:20] 2025-10-11 11:33:17,743 | INFO     | overall cleanup function is called
[2025-10-11 07:34:20] 2025-10-11 11:33:18,749 | INFO     | --- collectZombieJob: --- 10, [936303]
[2025-10-11 07:34:20] 2025-10-11 11:33:18,750 | INFO     | zombie collector waiting for pid 936303
[2025-10-11 07:34:20] 2025-10-11 11:33:18,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:34:20] 2025-10-11 11:33:18,750 | INFO     | collected zombie processes
[2025-10-11 07:34:20] 2025-10-11 11:33:18,750 | INFO     | will attempt to kill all subprocesses of pid=936303
[2025-10-11 07:34:20] 2025-10-11 11:33:19,115 | INFO     | process IDs to be killed: [936303] (in reverse order)
[2025-10-11 07:34:20] 2025-10-11 11:33:19,235 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:34:20] 2025-10-11 11:33:19,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:34:20] 2025-10-11 11:33:19,250 | INFO     | did not find any defunct processes belonging to 936303
[2025-10-11 07:34:20] 2025-10-11 11:33:19,264 | INFO     | did not find any defunct processes belonging to 936303
[2025-10-11 07:34:20] 2025-10-11 11:33:19,264 | INFO     | ready for new job
[2025-10-11 07:34:20] 2025-10-11 11:33:19,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:34:20] 2025-10-11 11:33:19,266 | INFO     | ***************************************
[2025-10-11 07:34:20] 2025-10-11 11:33:19,266 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:34:20] 2025-10-11 11:33:19,267 | INFO     | ***************************************
[2025-10-11 07:34:20] 2025-10-11 11:33:19,267 | INFO     | 
[2025-10-11 07:34:20] 2025-10-11 11:33:19,280 | INFO     | architecture information:
[2025-10-11 07:34:20] 2025-10-11 11:33:19,281 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:34:20] 2025-10-11 11:33:19,296 | INFO     | cat /etc/os-release:
[2025-10-11 07:34:20] NAME="CentOS Linux"
[2025-10-11 07:34:20] VERSION="7 (Core)"
[2025-10-11 07:34:20] ID="centos"
[2025-10-11 07:34:20] ID_LIKE="rhel fedora"
[2025-10-11 07:34:20] VERSION_ID="7"
[2025-10-11 07:34:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:34:20] ANSI_COLOR="0;31"
[2025-10-11 07:34:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:34:20] HOME_URL="https://www.centos.org/"
[2025-10-11 07:34:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:34:20] 
[2025-10-11 07:34:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:34:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:34:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:34:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:34:20] 
[2025-10-11 07:34:20] 2025-10-11 11:33:19,296 | INFO     | ***************************************
[2025-10-11 07:34:20] 2025-10-11 11:33:19,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 07:34:20] 2025-10-11 11:33:19,815 | INFO     | sufficient remaining disk space (75865522176 B)
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | INFO     | update_server=False
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:34:20] 2025-10-11 11:33:19,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:34:20] 2025-10-11 11:33:19,817 | INFO     | aborting loop
[2025-10-11 07:34:20] 2025-10-11 11:33:20,331 | INFO     | all job control threads have been joined
[2025-10-11 07:34:20] 2025-10-11 11:33:20,566 | INFO     | all data control threads have been joined
[2025-10-11 07:34:20] 2025-10-11 11:33:20,821 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:20,822 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:20,831 | INFO     | all payload control threads have been joined
[2025-10-11 07:34:20] 2025-10-11 11:33:20,851 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:20,924 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,022 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:34:20] 2025-10-11 11:33:21,336 | INFO     | [job] control thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,571 | INFO     | [data] control thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,622 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,757 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,836 | INFO     | [payload] control thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:21,880 | INFO     | [job] validate thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:22,246 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:22,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:34:20] 2025-10-11 11:33:23,155 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:23,652 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:23,823 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:34:20] 2025-10-11 11:33:49,457 | INFO     | PID=925149 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:34:20] 2025-10-11 11:33:49,458 | INFO     | .. there are 29 such processes running
[2025-10-11 07:34:20] 2025-10-11 11:33:49,460 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:34:20] 2025-10-11 11:33:49,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:34:20] 2025-10-11 11:33:49,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:34:20] 2025-10-11 11:34:15,164 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:34:20] 2025-10-11 11:34:15,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935350736704)>', '<ExcThread(monitor, started 139934715336448)>']
[2025-10-11 07:34:20] 2025-10-11 11:34:15,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:34:20] 2025-10-11 11:34:15,586 | INFO     | [monitor] control thread has ended
[2025-10-11 07:34:20] 2025-10-11 11:34:20,225 | INFO     | all workflow threads have been joined
[2025-10-11 07:34:20] 2025-10-11 11:34:20,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:34:20] 2025-10-11 11:34:20,225 | INFO     | traces error code: 0
[2025-10-11 07:34:20] 2025-10-11 11:34:20,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:34:20] 2025-10-11 11:34:20,417 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:34:20] 2025-10-11 11:34:20,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:34:20] 2025-10-11 11:34:20,421 [wrapper] pilotpid: 925149
[2025-10-11 07:34:20] 2025-10-11 11:34:20,423 [wrapper] Pilot exit status: 0
[2025-10-11 07:34:20] 2025-10-11 11:34:20,432 [wrapper] pandaids: 6838001113
[2025-10-11 07:34:20] 2025-10-11 11:34:20,507 [wrapper] cleanup supervisor_pilot 1194863 925150
[2025-10-11 07:34:20] 2025-10-11 11:34:20,510 [wrapper] Test setup, not cleaning
[2025-10-11 07:34:20] 2025-10-11 11:34:20,512 [wrapper] apfmon messages muted
[2025-10-11 07:34:20] 2025-10-11 11:34:20,515 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:34:20] 2025-10-11 11:34:20,518 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:34:20]  *** Error codes and diagnostics ***
[2025-10-11 07:34:20]     "exeErrorCode": 0,
[2025-10-11 07:34:20]     "exeErrorDiag": "",
[2025-10-11 07:34:20]     "pilotErrorCode": 0,
[2025-10-11 07:34:20]     "pilotErrorDiag": "",
[2025-10-11 07:34:20]  *** Listing of results directory ***
[2025-10-11 07:34:20] total 417564
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 23:24 queuedata.json
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 23:26 pilot3.tar.gz
[2025-10-11 07:34:20] -rwx------. 1 boincer umatlas     36292 Oct 10 23:26 runpilot2-wrapper.sh
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas       100 Oct 11 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:34:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 05:56 run_atlas
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas       105 Oct 11 05:56 job.xml
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas 223220103 Oct 11 05:56 EVNT.46676267._002022.pool.root.1
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:56 start_atlas.sh
[2025-10-11 07:34:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 05:56 shared
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 05:56 input.tar.gz
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas         0 Oct 11 05:56 boinc_lockfile
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 05:56 pandaJob.out
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas    975525 Oct 11 05:57 agis_schedconf.cvmfs.json
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas   1560580 Oct 11 05:57 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:34:20] drwx------. 5 boincer umatlas      4096 Oct 11 05:57 pilot3
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas      6654 Oct 11 07:27 init_data.xml
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas 198044896 Oct 11 07:32 HITS.46676269._050225.pool.root.1
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas       529 Oct 11 07:32 boinc_task_state.xml
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas      1037 Oct 11 07:33 memory_monitor_summary.json
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas    385393 Oct 11 07:33 log.46676269._050225.job.log.tgz.1
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas      7814 Oct 11 07:33 heartbeat.json
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas        95 Oct 11 07:33 pilot_heartbeat.json
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas        27 Oct 11 07:33 wrapper_checkpoint.txt
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:33 boinc_mmap_file
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas      4823 Oct 11 07:34 pilotlog.txt
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas    822623 Oct 11 07:34 log.46676269._050225.job.log.1
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas       357 Oct 11 07:34 output.list
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:34 runtime_log
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas   1228800 Oct 11 07:34 result.tar.gz
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas       650 Oct 11 07:34 vEULDmvQfR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwIfNDmiQGTTm.diag
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas      8690 Oct 11 07:34 runtime_log.err
[2025-10-11 07:34:20] -rw-r--r--. 1 boincer umatlas     21926 Oct 11 07:34 stderr.txt
[2025-10-11 07:34:20] HITS file was successfully produced:
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas 198044896 Oct 11 07:32 shared/HITS.pool.root.1
[2025-10-11 07:34:20]  *** Contents of shared directory: ***
[2025-10-11 07:34:20] total 413176
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas 223220103 Oct 11 05:56 ATLAS.root_0
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:56 start_atlas.sh
[2025-10-11 07:34:20] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 05:56 input.tar.gz
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas 198044896 Oct 11 07:32 HITS.pool.root.1
[2025-10-11 07:34:20] -rw-------. 1 boincer umatlas   1228800 Oct 11 07:34 result.tar.gz
07:34:21 (918018): run_atlas exited; CPU time 49325.897704
07:34:21 (918018): called boinc_finish(0)

</stderr_txt>
]]>

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