Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:35:45 (22490): wrapper (7.7.26015): starting
04:35:45 (22490): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 04:35:45] Arguments: --nthreads 8
[2025-10-11 04:35:45] Threads: 8
[2025-10-11 04:35:45] Checking for CVMFS
[2025-10-11 04:35:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:35:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:35:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:35:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:35:46] 2.11.2.0 31396 51184 130488 151577 2 58 15827343 18432000 1315 130560 0 44512792 99.974 2195652 39362 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 04:35:46] CVMFS is ok
[2025-10-11 04:35:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:35:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:35:46] Further information can be found at the LHC@home message board.
[2025-10-11 04:35:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:35:46] Checking for apptainer binary...
[2025-10-11 04:35:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:35:46] Running /usr/bin/apptainer --version
[2025-10-11 04:35:46] apptainer version 1.3.2-1.el7
[2025-10-11 04:35:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:35:47] c-206-10.aglt2.org
[2025-10-11 04:35:47] apptainer works
[2025-10-11 04:35:47] Set ATHENA_PROC_NUMBER=8
[2025-10-11 04:35:47] Set ATHENA_CORE_NUMBER=8
[2025-10-11 04:35:47] Starting ATLAS job with PandaID=6838000779
[2025-10-11 04:35:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:34:23]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:34:23] 2025-10-11 11:33:33,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:34:23] 2025-10-11 11:33:33,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:34:23] 2025-10-11 11:33:33,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:34:23] 2025-10-11 11:33:33,913 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:34:23] 2025-10-11 11:33:33,914 | INFO     | sum of square deviations: 1661798600.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | sum of deviations: 5875879961.000002
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | mean x: 1760177091.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | mean y: 2462275.297142857
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | -- intersect: -6221269828.471735
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | intersect: -6221269828.471735
[2025-10-11 07:34:23] 2025-10-11 11:33:33,915 | INFO     | chi2: 2.0926783395631654
[2025-10-11 07:34:23] 2025-10-11 11:33:33,916 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,916 | INFO     | sum of deviations: 17078461122.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,916 | INFO     | mean x: 1760176938.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | mean y: 2474325.0529411766
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | -- intersect: -19730606818.139805
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | intersect: -19730606818.139805
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | chi2: 1.3200727029861434
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | current chi2=1.3200727029861434 (change=36.9194644953557 %)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,917 | INFO     | sum of square deviations: 1392881930.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,918 | INFO     | sum of deviations: 16582692070.999996
[2025-10-11 07:34:23] 2025-10-11 11:33:33,918 | INFO     | mean x: 1760176786.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,918 | INFO     | mean y: 2473745.5636363635
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | -- intersect: -20952977685.09744
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | intersect: -20952977685.09744
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | chi2: 1.3211490891176207
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | current chi2=1.3211490891176207 (change=-0.081539912842862 %)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | right removable region: 164
[2025-10-11 07:34:23] 2025-10-11 11:33:33,919 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,920 | INFO     | sum of deviations: -18582302326.999996
[2025-10-11 07:34:23] 2025-10-11 11:33:33,920 | INFO     | mean x: 1760177243.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,920 | INFO     | mean y: 2488884.4235294117
[2025-10-11 07:34:23] 2025-10-11 11:33:33,921 | INFO     | -- intersect: 21473167100.365543
[2025-10-11 07:34:23] 2025-10-11 11:33:33,921 | INFO     | intersect: 21473167100.365543
[2025-10-11 07:34:23] 2025-10-11 11:33:33,921 | INFO     | chi2: 0.8150629792258587
[2025-10-11 07:34:23] 2025-10-11 11:33:33,921 | INFO     | current chi2=0.8150629792258587 (change=61.05168368130581 %)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,921 | INFO     | sum of square deviations: 1392881930.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,922 | INFO     | sum of deviations: -18686613547.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,922 | INFO     | mean x: 1760177396.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,922 | INFO     | mean y: 2488981.4545454546
[2025-10-11 07:34:23] 2025-10-11 11:33:33,922 | INFO     | -- intersect: 23616661916.56957
[2025-10-11 07:34:23] 2025-10-11 11:33:33,922 | INFO     | intersect: 23616661916.56957
[2025-10-11 07:34:23] 2025-10-11 11:33:33,923 | INFO     | chi2: 0.8112438224126853
[2025-10-11 07:34:23] 2025-10-11 11:33:33,923 | INFO     | current chi2=0.8112438224126853 (change=0.46857198897694524 %)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,923 | INFO     | left removable region: 20
[2025-10-11 07:34:23] 2025-10-11 11:33:33,923 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | sum of deviations: -4831210034.499999
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | mean x: 1760177365.5
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | mean y: 2499503.6041666665
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | -- intersect: 9187250669.88123
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | intersect: 9187250669.88123
[2025-10-11 07:34:23] 2025-10-11 11:33:33,924 | INFO     | chi2: 0.014972954051391473
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | -- intersect: 9187250669.88123
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | current memory leak: -5.22 B/s (using 144 data points, chi2=0.01)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | could have reported an average CPU frequency of 2328 MHz (9 samples)
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | ..............................
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | . Timing measurements:
[2025-10-11 07:34:23] 2025-10-11 11:33:33,925 | INFO     | . get job = 0 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . initial setup = 2 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . payload setup = 5 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . stage-in = 0 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . payload execution = 10622 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . stage-out = 0 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | . log creation = 0 s
[2025-10-11 07:34:23] 2025-10-11 11:33:33,926 | INFO     | ..............................
[2025-10-11 07:34:23] 2025-10-11 11:33:34,022 | INFO     | 
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | job summary report
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | --------------------------------------------------
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | PanDA job id: 6838000779
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | task id: 46676269
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | errors: (none)
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | pilot state: finished 
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | transexitcode: 0
[2025-10-11 07:34:23] 2025-10-11 11:33:34,023 | INFO     | exeerrorcode: 0
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | exeerrordiag: 
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | exitcode: 0
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | exitmsg: OK
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | cpuconsumptiontime: 80265 s
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | nevents: 400
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | neventsw: 0
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | pid: 2583
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | pgrp: 2583
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | corecount: 8
[2025-10-11 07:34:23] 2025-10-11 11:33:34,024 | INFO     | event service: False
[2025-10-11 07:34:23] 2025-10-11 11:33:34,025 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10631: 2378005, 10632: 2378004, 10633: 2387058, 10636: 2387270, 10640: 2387528}
[2025-10-11 07:34:23] 2025-10-11 11:33:34,025 | INFO     | --------------------------------------------------
[2025-10-11 07:34:23] 2025-10-11 11:33:34,025 | INFO     | 
[2025-10-11 07:34:23] 2025-10-11 11:33:34,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | job 6838000779 has completed (purged errors)
[2025-10-11 07:34:23] 2025-10-11 11:33:34,041 | INFO     | overall cleanup function is called
[2025-10-11 07:34:23] 2025-10-11 11:33:35,048 | INFO     | --- collectZombieJob: --- 10, [2583]
[2025-10-11 07:34:23] 2025-10-11 11:33:35,049 | INFO     | zombie collector waiting for pid 2583
[2025-10-11 07:34:23] 2025-10-11 11:33:35,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:34:23] 2025-10-11 11:33:35,049 | INFO     | collected zombie processes
[2025-10-11 07:34:23] 2025-10-11 11:33:35,049 | INFO     | will attempt to kill all subprocesses of pid=2583
[2025-10-11 07:34:23] 2025-10-11 11:33:35,219 | INFO     | process IDs to be killed: [2583] (in reverse order)
[2025-10-11 07:34:23] 2025-10-11 11:33:35,281 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:34:23] 2025-10-11 11:33:35,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:34:23] 2025-10-11 11:33:35,285 | INFO     | did not find any defunct processes belonging to 2583
[2025-10-11 07:34:23] 2025-10-11 11:33:35,287 | INFO     | did not find any defunct processes belonging to 2583
[2025-10-11 07:34:23] 2025-10-11 11:33:35,287 | INFO     | ready for new job
[2025-10-11 07:34:23] 2025-10-11 11:33:35,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:34:23] 2025-10-11 11:33:35,289 | INFO     | ***************************************
[2025-10-11 07:34:23] 2025-10-11 11:33:35,289 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:34:23] 2025-10-11 11:33:35,289 | INFO     | ***************************************
[2025-10-11 07:34:23] 2025-10-11 11:33:35,289 | INFO     | 
[2025-10-11 07:34:23] 2025-10-11 11:33:35,290 | INFO     | architecture information:
[2025-10-11 07:34:23] 2025-10-11 11:33:35,290 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:34:23] 2025-10-11 11:33:35,300 | INFO     | cat /etc/os-release:
[2025-10-11 07:34:23] NAME="CentOS Linux"
[2025-10-11 07:34:23] VERSION="7 (Core)"
[2025-10-11 07:34:23] ID="centos"
[2025-10-11 07:34:23] ID_LIKE="rhel fedora"
[2025-10-11 07:34:23] VERSION_ID="7"
[2025-10-11 07:34:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:34:23] ANSI_COLOR="0;31"
[2025-10-11 07:34:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:34:23] HOME_URL="https://www.centos.org/"
[2025-10-11 07:34:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:34:23] 
[2025-10-11 07:34:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:34:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:34:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:34:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:34:23] 
[2025-10-11 07:34:23] 2025-10-11 11:33:35,300 | INFO     | ***************************************
[2025-10-11 07:34:23] 2025-10-11 11:33:35,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 07:34:23] 2025-10-11 11:33:35,819 | INFO     | sufficient remaining disk space (27915190272 B)
[2025-10-11 07:34:23] 2025-10-11 11:33:35,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:34:23] 2025-10-11 11:33:35,820 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:34:23] 2025-10-11 11:33:35,820 | INFO     | update_server=False
[2025-10-11 07:34:23] 2025-10-11 11:33:35,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:34:23] 2025-10-11 11:33:35,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:34:23] 2025-10-11 11:33:35,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:34:23] 2025-10-11 11:33:35,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:34:23] 2025-10-11 11:33:36,185 | INFO     | all payload control threads have been joined
[2025-10-11 07:34:23] 2025-10-11 11:33:36,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:34:23] 2025-10-11 11:33:36,274 | INFO     | aborting loop
[2025-10-11 07:34:23] 2025-10-11 11:33:36,287 | INFO     | all job control threads have been joined
[2025-10-11 07:34:23] 2025-10-11 11:33:36,650 | INFO     | all data control threads have been joined
[2025-10-11 07:34:23] 2025-10-11 11:33:36,821 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:36,827 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:36,837 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,133 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,191 | INFO     | [payload] control thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,279 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,293 | INFO     | [job] control thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,656 | INFO     | [data] control thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,827 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,947 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,957 | INFO     | [job] validate thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:37,958 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:38,166 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:38,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:33:39,867 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:34:23] 2025-10-11 11:34:05,651 | INFO     | PID=26190 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 07:34:23] 2025-10-11 11:34:05,651 | INFO     | .. there are 3 such processes running
[2025-10-11 07:34:23] 2025-10-11 11:34:05,652 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:34:23] 2025-10-11 11:34:05,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:34:23] 2025-10-11 11:34:05,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:34:23] 2025-10-11 11:34:15,783 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:34:23] 2025-10-11 11:34:17,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637850969920)>', '<ExcThread(monitor, started 140637244462848)>']
[2025-10-11 07:34:23] 2025-10-11 11:34:18,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:34:23] 2025-10-11 11:34:18,713 | INFO     | [monitor] control thread has ended
[2025-10-11 07:34:23] 2025-10-11 11:34:22,881 | INFO     | all workflow threads have been joined
[2025-10-11 07:34:23] 2025-10-11 11:34:22,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:34:23] 2025-10-11 11:34:22,882 | INFO     | traces error code: 0
[2025-10-11 07:34:23] 2025-10-11 11:34:22,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:34:23] 2025-10-11 11:34:22,980 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:34:23] 2025-10-11 11:34:22,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:34:23] 2025-10-11 11:34:22,984 [wrapper] pilotpid: 26190
[2025-10-11 07:34:23] 2025-10-11 11:34:22,986 [wrapper] Pilot exit status: 0
[2025-10-11 07:34:23] 2025-10-11 11:34:22,994 [wrapper] pandaids: 6838000779
[2025-10-11 07:34:23] 2025-10-11 11:34:23,023 [wrapper] cleanup supervisor_pilot  2826 26191
[2025-10-11 07:34:23] 2025-10-11 11:34:23,026 [wrapper] Test setup, not cleaning
[2025-10-11 07:34:23] 2025-10-11 11:34:23,028 [wrapper] apfmon messages muted
[2025-10-11 07:34:23] 2025-10-11 11:34:23,030 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:34:23] 2025-10-11 11:34:23,032 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:34:23]  *** Error codes and diagnostics ***
[2025-10-11 07:34:23]     "exeErrorCode": 0,
[2025-10-11 07:34:23]     "exeErrorDiag": "",
[2025-10-11 07:34:23]     "pilotErrorCode": 0,
[2025-10-11 07:34:23]     "pilotErrorDiag": "",
[2025-10-11 07:34:23]  *** Listing of results directory ***
[2025-10-11 07:34:23] total 411568
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 23:19 pilot3.tar.gz
[2025-10-11 07:34:23] -rwx------ 1 boincer umatlas     36292 Oct 10 23:21 runpilot2-wrapper.sh
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 23:21 queuedata.json
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas       100 Oct 11 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:34:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 04:35 run_atlas
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas       105 Oct 11 04:35 job.xml
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas 221410916 Oct 11 04:35 EVNT.46676267._002019.pool.root.1
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:35 start_atlas.sh
[2025-10-11 07:34:23] drwxrwx--x 2 boincer umatlas      4096 Oct 11 04:35 shared
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 04:35 input.tar.gz
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas         0 Oct 11 04:35 boinc_lockfile
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 04:35 pandaJob.out
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas    975509 Oct 11 04:35 agis_schedconf.cvmfs.json
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas   1560580 Oct 11 04:35 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:34:23] drwx------ 5 boincer umatlas      4096 Oct 11 04:35 pilot3
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 07:28 init_data.xml
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas 192316260 Oct 11 07:32 HITS.46676269._050151.pool.root.1
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas       531 Oct 11 07:33 boinc_task_state.xml
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas      1056 Oct 11 07:33 memory_monitor_summary.json
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas    416678 Oct 11 07:33 log.46676269._050151.job.log.tgz.1
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas      7861 Oct 11 07:33 heartbeat.json
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas        28 Oct 11 07:33 wrapper_checkpoint.txt
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 07:33 boinc_mmap_file
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas        95 Oct 11 07:34 pilot_heartbeat.json
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas      4821 Oct 11 07:34 pilotlog.txt
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas   1490342 Oct 11 07:34 log.46676269._050151.job.log.1
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas       357 Oct 11 07:34 output.list
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas       620 Oct 11 07:34 runtime_log
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas   1925120 Oct 11 07:34 result.tar.gz
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas       662 Oct 11 07:34 tMQMDmsLfR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmf3QMDmiSRO0n.diag
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 07:34 runtime_log.err
[2025-10-11 07:34:23] -rw-r--r-- 1 boincer umatlas     20871 Oct 11 07:34 stderr.txt
[2025-10-11 07:34:23] HITS file was successfully produced:
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas 192316260 Oct 11 07:32 shared/HITS.pool.root.1
[2025-10-11 07:34:23]  *** Contents of shared directory: ***
[2025-10-11 07:34:23] total 406500
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas 221410916 Oct 11 04:35 ATLAS.root_0
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 04:35 start_atlas.sh
[2025-10-11 07:34:23] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 04:35 input.tar.gz
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas 192316260 Oct 11 07:32 HITS.pool.root.1
[2025-10-11 07:34:23] -rw------- 1 boincer umatlas   1925120 Oct 11 07:34 result.tar.gz
07:34:25 (22490): run_atlas exited; CPU time 80406.816497
07:34:25 (22490): called boinc_finish(0)

</stderr_txt>
]]>

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