Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:34:42 (4007487): wrapper (7.7.26015): starting
04:34:42 (4007487): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 04:34:42] Arguments: --nthreads 8
[2025-10-11 04:34:42] Threads: 8
[2025-10-11 04:34:42] Checking for CVMFS
[2025-10-11 04:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:34:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:34:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:34:44] 2.13.2.0 6268 4006 114028 151577 0 195 22499269 40960001 22671 16776704 0 9626802 99.923 2138190 36744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 04:34:44] CVMFS is ok
[2025-10-11 04:34:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:34:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:34:44] Further information can be found at the LHC@home message board.
[2025-10-11 04:34:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:34:44] Checking for apptainer binary...
[2025-10-11 04:34:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:34:44] Running /usr/bin/apptainer --version
[2025-10-11 04:34:44] apptainer version 1.4.3-1.el9
[2025-10-11 04:34:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:34:44] c-211-35-1.aglt2.org
[2025-10-11 04:34:44] apptainer works
[2025-10-11 04:34:44] Set ATHENA_PROC_NUMBER=8
[2025-10-11 04:34:44] Set ATHENA_CORE_NUMBER=8
[2025-10-11 04:34:44] Starting ATLAS job with PandaID=6838001236
[2025-10-11 04:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:28:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:28:49] 2025-10-11 13:27:59,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:28:49] 2025-10-11 13:27:59,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:28:49] 2025-10-11 13:27:59,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:28:49] 2025-10-11 13:27:59,639 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:28:49] 2025-10-11 13:27:59,640 | INFO     | sum of square deviations: 7330077060.536594
[2025-10-11 09:28:49] 2025-10-11 13:27:59,647 | INFO     | sum of deviations: 32273027193.14638
[2025-10-11 09:28:49] 2025-10-11 13:27:59,651 | INFO     | mean x: 1760180487.6585367
[2025-10-11 09:28:49] 2025-10-11 13:27:59,651 | INFO     | mean y: 2492799.3484320557
[2025-10-11 09:28:49] 2025-10-11 13:27:59,651 | INFO     | -- intersect: -7747269211.869925
[2025-10-11 09:28:49] 2025-10-11 13:27:59,651 | INFO     | intersect: -7747269211.869925
[2025-10-11 09:28:49] 2025-10-11 13:27:59,652 | INFO     | chi2: 2.643789210906345
[2025-10-11 09:28:49] 2025-10-11 13:27:59,652 | INFO     | sum of square deviations: 6953635719.166649
[2025-10-11 09:28:49] 2025-10-11 13:27:59,659 | INFO     | sum of deviations: 48575671884.83333
[2025-10-11 09:28:49] 2025-10-11 13:27:59,659 | INFO     | mean x: 1760180335.1666667
[2025-10-11 09:28:49] 2025-10-11 13:27:59,659 | INFO     | mean y: 2499302.939716312
[2025-10-11 09:28:49] 2025-10-11 13:27:59,660 | INFO     | -- intersect: -12293506106.65037
[2025-10-11 09:28:49] 2025-10-11 13:27:59,660 | INFO     | intersect: -12293506106.65037
[2025-10-11 09:28:49] 2025-10-11 13:27:59,660 | INFO     | chi2: 1.9608044407982115
[2025-10-11 09:28:49] 2025-10-11 13:27:59,660 | INFO     | current chi2=1.9608044407982115 (change=25.83355614322946 %)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,661 | INFO     | sum of square deviations: 6590259297.776182
[2025-10-11 09:28:49] 2025-10-11 13:27:59,667 | INFO     | sum of deviations: 47613570714.53791
[2025-10-11 09:28:49] 2025-10-11 13:27:59,668 | INFO     | mean x: 1760180182.66426
[2025-10-11 09:28:49] 2025-10-11 13:27:59,668 | INFO     | mean y: 2498899.306859206
[2025-10-11 09:28:49] 2025-10-11 13:27:59,668 | INFO     | -- intersect: -12714521753.566895
[2025-10-11 09:28:49] 2025-10-11 13:27:59,668 | INFO     | intersect: -12714521753.566895
[2025-10-11 09:28:49] 2025-10-11 13:27:59,669 | INFO     | chi2: 1.9616647732153916
[2025-10-11 09:28:49] 2025-10-11 13:27:59,675 | INFO     | current chi2=1.9616647732153916 (change=-0.04387650289234658 %)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,675 | INFO     | right removable region: 276
[2025-10-11 09:28:49] 2025-10-11 13:27:59,676 | INFO     | sum of square deviations: 6953537935.829757
[2025-10-11 09:28:49] 2025-10-11 13:27:59,682 | INFO     | sum of deviations: -25443990632.936188
[2025-10-11 09:28:49] 2025-10-11 13:27:59,683 | INFO     | mean x: 1760180640.1702127
[2025-10-11 09:28:49] 2025-10-11 13:27:59,683 | INFO     | mean y: 2516053.936170213
[2025-10-11 09:28:49] 2025-10-11 13:27:59,683 | INFO     | -- intersect: 6443268967.643005
[2025-10-11 09:28:49] 2025-10-11 13:27:59,683 | INFO     | intersect: 6443268967.643005
[2025-10-11 09:28:49] 2025-10-11 13:27:59,683 | INFO     | chi2: 0.7786911677435076
[2025-10-11 09:28:49] 2025-10-11 13:27:59,684 | INFO     | current chi2=0.7786911677435076 (change=70.54639740070063 %)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,684 | INFO     | sum of square deviations: 6590132538.404316
[2025-10-11 09:28:49] 2025-10-11 13:27:59,690 | INFO     | sum of deviations: -31511950399.234646
[2025-10-11 09:28:49] 2025-10-11 13:27:59,691 | INFO     | mean x: 1760180792.6787004
[2025-10-11 09:28:49] 2025-10-11 13:27:59,691 | INFO     | mean y: 2518575.570397112
[2025-10-11 09:28:49] 2025-10-11 13:27:59,691 | INFO     | -- intersect: 8419152005.830211
[2025-10-11 09:28:49] 2025-10-11 13:27:59,691 | INFO     | intersect: 8419152005.830211
[2025-10-11 09:28:49] 2025-10-11 13:27:59,692 | INFO     | chi2: 0.7406272808166514
[2025-10-11 09:28:49] 2025-10-11 13:27:59,692 | INFO     | current chi2=0.7406272808166514 (change=4.88818783410087 %)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,692 | INFO     | left removable region: 20
[2025-10-11 09:28:49] 2025-10-11 13:27:59,692 | INFO     | sum of square deviations: 5201996522.234375
[2025-10-11 09:28:49] 2025-10-11 13:27:59,699 | INFO     | sum of deviations: -8046166097.875
[2025-10-11 09:28:49] 2025-10-11 13:27:59,699 | INFO     | mean x: 1760180762.1953125
[2025-10-11 09:28:49] 2025-10-11 13:27:59,699 | INFO     | mean y: 2522828.9375
[2025-10-11 09:28:49] 2025-10-11 13:27:59,699 | INFO     | -- intersect: 2725074971.0570602
[2025-10-11 09:28:49] 2025-10-11 13:27:59,699 | INFO     | intersect: 2725074971.0570602
[2025-10-11 09:28:49] 2025-10-11 13:27:59,700 | INFO     | chi2: 0.03330127132478383
[2025-10-11 09:28:49] 2025-10-11 13:27:59,700 | INFO     | -- intersect: 2725074971.0570602
[2025-10-11 09:28:49] 2025-10-11 13:27:59,700 | INFO     | current memory leak: -1.55 B/s (using 256 data points, chi2=0.03)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,701 | INFO     | could have reported an average CPU frequency of 2507 MHz (13 samples)
[2025-10-11 09:28:49] 2025-10-11 13:27:59,701 | INFO     | ..............................
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . Timing measurements:
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . get job = 0 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . initial setup = 3 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . payload setup = 13 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . stage-in = 0 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . payload execution = 17487 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . stage-out = 4 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | . log creation = 0 s
[2025-10-11 09:28:49] 2025-10-11 13:27:59,706 | INFO     | ..............................
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | 
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | job summary report
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | --------------------------------------------------
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | PanDA job id: 6838001236
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | task id: 46676269
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | errors: (none)
[2025-10-11 09:28:49] 2025-10-11 13:28:00,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | pilot state: finished 
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | transexitcode: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | exeerrorcode: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | exeerrordiag: 
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | exitcode: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | exitmsg: OK
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | cpuconsumptiontime: 49412 s
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | nevents: 400
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | neventsw: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | pid: 4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | pgrp: 4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | corecount: 8
[2025-10-11 09:28:49] 2025-10-11 13:28:00,152 | INFO     | event service: False
[2025-10-11 09:28:49] 2025-10-11 13:28:00,153 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349147, 12: 2349175, 17505: 2381141, 17510: 2390139, 17511: 2390323, 17545: 2390517}
[2025-10-11 09:28:49] 2025-10-11 13:28:00,153 | INFO     | --------------------------------------------------
[2025-10-11 09:28:49] 2025-10-11 13:28:00,153 | INFO     | 
[2025-10-11 09:28:49] 2025-10-11 13:28:00,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 09:28:49] 2025-10-11 13:28:00,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | job 6838001236 has completed (purged errors)
[2025-10-11 09:28:49] 2025-10-11 13:28:00,327 | INFO     | overall cleanup function is called
[2025-10-11 09:28:49] 2025-10-11 13:28:01,353 | INFO     | --- collectZombieJob: --- 10, [4017867]
[2025-10-11 09:28:49] 2025-10-11 13:28:01,353 | INFO     | zombie collector waiting for pid 4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:01,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:28:49] 2025-10-11 13:28:01,353 | INFO     | collected zombie processes
[2025-10-11 09:28:49] 2025-10-11 13:28:01,353 | INFO     | will attempt to kill all subprocesses of pid=4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:02,443 | INFO     | process IDs to be killed: [4017867] (in reverse order)
[2025-10-11 09:28:49] 2025-10-11 13:28:02,670 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:28:49] 2025-10-11 13:28:02,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:28:49] 2025-10-11 13:28:02,687 | INFO     | did not find any defunct processes belonging to 4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:02,704 | INFO     | did not find any defunct processes belonging to 4017867
[2025-10-11 09:28:49] 2025-10-11 13:28:02,705 | INFO     | ready for new job
[2025-10-11 09:28:49] 2025-10-11 13:28:02,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:28:49] 2025-10-11 13:28:02,708 | INFO     | ***************************************
[2025-10-11 09:28:49] 2025-10-11 13:28:02,708 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:28:49] 2025-10-11 13:28:02,708 | INFO     | ***************************************
[2025-10-11 09:28:49] 2025-10-11 13:28:02,708 | INFO     | 
[2025-10-11 09:28:49] 2025-10-11 13:28:02,715 | INFO     | architecture information:
[2025-10-11 09:28:49] 2025-10-11 13:28:02,716 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:28:49] 2025-10-11 13:28:02,775 | INFO     | cat /etc/os-release:
[2025-10-11 09:28:49] NAME="CentOS Linux"
[2025-10-11 09:28:49] VERSION="7 (Core)"
[2025-10-11 09:28:49] ID="centos"
[2025-10-11 09:28:49] ID_LIKE="rhel fedora"
[2025-10-11 09:28:49] VERSION_ID="7"
[2025-10-11 09:28:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:28:49] ANSI_COLOR="0;31"
[2025-10-11 09:28:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:28:49] HOME_URL="https://www.centos.org/"
[2025-10-11 09:28:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:28:49] 
[2025-10-11 09:28:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:28:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:28:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:28:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:28:49] 
[2025-10-11 09:28:49] 2025-10-11 13:28:02,775 | INFO     | ***************************************
[2025-10-11 09:28:49] 2025-10-11 13:28:03,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 09:28:49] 2025-10-11 13:28:03,435 | INFO     | sufficient remaining disk space (127395692544 B)
[2025-10-11 09:28:49] 2025-10-11 13:28:03,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:28:49] 2025-10-11 13:28:03,436 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:28:49] 2025-10-11 13:28:03,436 | INFO     | update_server=False
[2025-10-11 09:28:49] 2025-10-11 13:28:03,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:28:49] 2025-10-11 13:28:03,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:28:49] 2025-10-11 13:28:03,765 | INFO     | aborting loop
[2025-10-11 09:28:49] 2025-10-11 13:28:03,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:28:49] 2025-10-11 13:28:03,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:28:49] 2025-10-11 13:28:04,169 | INFO     | all data control threads have been joined
[2025-10-11 09:28:49] 2025-10-11 13:28:04,240 | INFO     | all job control threads have been joined
[2025-10-11 09:28:49] 2025-10-11 13:28:04,442 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:04,518 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:04,771 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:04,777 | INFO     | all payload control threads have been joined
[2025-10-11 09:28:49] 2025-10-11 13:28:04,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:28:49] 2025-10-11 13:28:04,968 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,108 | INFO     | [job] validate thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,175 | INFO     | [data] control thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,224 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,258 | INFO     | [job] control thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,259 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,639 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,650 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,783 | INFO     | [payload] control thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,798 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:05,889 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:07,960 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:28:49] 2025-10-11 13:28:34,501 | INFO     | PID=4011422 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:28:49] 2025-10-11 13:28:34,502 | INFO     | .. there are 16 such processes running
[2025-10-11 09:28:49] 2025-10-11 13:28:34,520 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:28:49] 2025-10-11 13:28:34,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:28:49] 2025-10-11 13:28:34,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:28:49] 2025-10-11 13:28:41,852 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:28:49] 2025-10-11 13:28:42,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812745230144)>', '<ExcThread(monitor, started 139812258445056)>']
[2025-10-11 09:28:49] 2025-10-11 13:28:42,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:28:49] 2025-10-11 13:28:42,568 | INFO     | [monitor] control thread has ended
[2025-10-11 09:28:49] 2025-10-11 13:28:47,115 | INFO     | all workflow threads have been joined
[2025-10-11 09:28:49] 2025-10-11 13:28:47,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:28:49] 2025-10-11 13:28:47,115 | INFO     | traces error code: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:47,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:28:49] 2025-10-11 13:28:47,810 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:28:49] 2025-10-11 13:28:47,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:28:49] 2025-10-11 13:28:47,875 [wrapper] pilotpid: 4011422
[2025-10-11 09:28:49] 2025-10-11 13:28:47,910 [wrapper] Pilot exit status: 0
[2025-10-11 09:28:49] 2025-10-11 13:28:48,003 [wrapper] pandaids: 6838001236
[2025-10-11 09:28:49] 2025-10-11 13:28:48,689 [wrapper] cleanup supervisor_pilot  399771 4011423
[2025-10-11 09:28:49] 2025-10-11 13:28:48,720 [wrapper] Test setup, not cleaning
[2025-10-11 09:28:49] 2025-10-11 13:28:48,755 [wrapper] apfmon messages muted
[2025-10-11 09:28:49] 2025-10-11 13:28:48,774 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:28:49] 2025-10-11 13:28:48,882 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:28:49]  *** Error codes and diagnostics ***
[2025-10-11 09:28:49]     "exeErrorCode": 0,
[2025-10-11 09:28:49]     "exeErrorDiag": "",
[2025-10-11 09:28:49]     "pilotErrorCode": 0,
[2025-10-11 09:28:49]     "pilotErrorDiag": "",
[2025-10-11 09:28:49]  *** Listing of results directory ***
[2025-10-11 09:28:49] total 410660
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 23:26 pilot3.tar.gz
[2025-10-11 09:28:49] -rwx------. 1 boincer umatlas     36292 Oct 10 23:36 runpilot2-wrapper.sh
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 23:36 queuedata.json
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas       100 Oct 11 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:28:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 04:34 run_atlas
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas       105 Oct 11 04:34 job.xml
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas 219722475 Oct 11 04:34 EVNT.46676267._002027.pool.root.1
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 04:34 start_atlas.sh
[2025-10-11 09:28:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 04:34 shared
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 04:34 input.tar.gz
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas         0 Oct 11 04:34 boinc_lockfile
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 04:34 pandaJob.out
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas    975509 Oct 11 04:35 agis_schedconf.cvmfs.json
[2025-10-11 09:28:49] drwx------. 5 boincer umatlas      4096 Oct 11 04:35 pilot3
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas      6858 Oct 11 09:19 init_data.xml
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas 191560294 Oct 11 09:25 HITS.46676269._050348.pool.root.1
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas       530 Oct 11 09:25 boinc_task_state.xml
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas      1048 Oct 11 09:27 memory_monitor_summary.json
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas   1560580 Oct 11 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas    485841 Oct 11 09:27 log.46676269._050348.job.log.tgz.1
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas      7839 Oct 11 09:27 heartbeat.json
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas        95 Oct 11 09:28 pilot_heartbeat.json
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:28 boinc_mmap_file
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas        28 Oct 11 09:28 wrapper_checkpoint.txt
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas      4825 Oct 11 09:28 pilotlog.txt
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas   2176408 Oct 11 09:28 log.46676269._050348.job.log.1
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas       357 Oct 11 09:28 output.list
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:28 runtime_log
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas   2682880 Oct 11 09:28 result.tar.gz
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 09:28 runtime_log.err
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas       657 Oct 11 09:28 4O0KDmGafR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFKfNDmkFG00m.diag
[2025-10-11 09:28:49] -rw-r--r--. 1 boincer umatlas     20972 Oct 11 09:28 stderr.txt
[2025-10-11 09:28:49] HITS file was successfully produced:
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas 191560294 Oct 11 09:25 shared/HITS.pool.root.1
[2025-10-11 09:28:49]  *** Contents of shared directory: ***
[2025-10-11 09:28:49] total 404852
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas 219722475 Oct 11 04:34 ATLAS.root_0
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 04:34 start_atlas.sh
[2025-10-11 09:28:49] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 04:34 input.tar.gz
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas 191560294 Oct 11 09:25 HITS.pool.root.1
[2025-10-11 09:28:49] -rw-------. 1 boincer umatlas   2682880 Oct 11 09:28 result.tar.gz
09:28:50 (4007487): run_atlas exited; CPU time 50046.165467
09:28:50 (4007487): called boinc_finish(0)

</stderr_txt>
]]>

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