Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:37:23 (3158344): wrapper (7.7.26015): starting
05:37:23 (3158344): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 05:37:23] Arguments: --nthreads 9
[2025-10-11 05:37:23] Threads: 9
[2025-10-11 05:37:23] Checking for CVMFS
[2025-10-11 05:37:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:37:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:37:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:37:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:37:25] 2.13.2.0 5035 111207 392812 151579 0 65 20582136 40960001 12996 16776704 1 187627176 99.668 165675805 37390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 05:37:25] CVMFS is ok
[2025-10-11 05:37:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:37:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:37:25] Further information can be found at the LHC@home message board.
[2025-10-11 05:37:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:37:25] Checking for apptainer binary...
[2025-10-11 05:37:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:37:25] Running /usr/bin/apptainer --version
[2025-10-11 05:37:25] apptainer version 1.4.3-1.el9
[2025-10-11 05:37:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:37:26] c-206-41.aglt2.org
[2025-10-11 05:37:26] apptainer works
[2025-10-11 05:37:26] Set ATHENA_PROC_NUMBER=9
[2025-10-11 05:37:26] Set ATHENA_CORE_NUMBER=9
[2025-10-11 05:37:26] Starting ATLAS job with PandaID=6838000598
[2025-10-11 05:37:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:13:16]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:13:16] 2025-10-11 14:12:24,089 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3156.686265625
[2025-10-11 10:13:16] 2025-10-11 14:12:24,100 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838000598/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,101 | INFO     | extracted standard info from prmon json
[2025-10-11 10:13:16] 2025-10-11 14:12:24,101 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:13:16] 2025-10-11 14:12:24,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:13:16] 2025-10-11 14:12:24,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:13:16] 2025-10-11 14:12:24,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:13:16] 2025-10-11 14:12:24,127 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:13:16] 2025-10-11 14:12:24,128 | INFO     | sum of square deviations: 5901864858.2547245
[2025-10-11 10:13:16] 2025-10-11 14:12:24,130 | INFO     | sum of deviations: 25633738883.56931
[2025-10-11 10:13:16] 2025-10-11 14:12:24,130 | INFO     | mean x: 1760183771.2097378
[2025-10-11 10:13:16] 2025-10-11 14:12:24,130 | INFO     | mean y: 2562060.7041198504
[2025-10-11 10:13:16] 2025-10-11 14:12:24,130 | INFO     | -- intersect: -7642494588.666441
[2025-10-11 10:13:16] 2025-10-11 14:12:24,130 | INFO     | intersect: -7642494588.666441
[2025-10-11 10:13:16] 2025-10-11 14:12:24,131 | INFO     | chi2: 1.3783377574400255
[2025-10-11 10:13:16] 2025-10-11 14:12:24,131 | INFO     | sum of square deviations: 5576471185.530508
[2025-10-11 10:13:16] 2025-10-11 14:12:24,133 | INFO     | sum of deviations: 25381415317.62978
[2025-10-11 10:13:16] 2025-10-11 14:12:24,133 | INFO     | mean x: 1760183618.7137403
[2025-10-11 10:13:16] 2025-10-11 14:12:24,133 | INFO     | mean y: 2561942.4083969467
[2025-10-11 10:13:16] 2025-10-11 14:12:24,133 | INFO     | -- intersect: -8008947482.724905
[2025-10-11 10:13:16] 2025-10-11 14:12:24,135 | INFO     | intersect: -8008947482.724905
[2025-10-11 10:13:16] 2025-10-11 14:12:24,135 | INFO     | chi2: 1.37884758673595
[2025-10-11 10:13:16] 2025-10-11 14:12:24,135 | INFO     | current chi2=1.37884758673595 (change=-0.036988705647255156 %)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,135 | INFO     | right removable region: 261
[2025-10-11 10:13:16] 2025-10-11 14:12:24,135 | INFO     | sum of square deviations: 5576437025.530508
[2025-10-11 10:13:16] 2025-10-11 14:12:24,137 | INFO     | sum of deviations: -11349237204.858776
[2025-10-11 10:13:16] 2025-10-11 14:12:24,137 | INFO     | mean x: 1760183923.7137403
[2025-10-11 10:13:16] 2025-10-11 14:12:24,137 | INFO     | mean y: 2579216.9885496185
[2025-10-11 10:13:16] 2025-10-11 14:12:24,137 | INFO     | -- intersect: 3584928445.169033
[2025-10-11 10:13:16] 2025-10-11 14:12:24,137 | INFO     | intersect: 3584928445.169033
[2025-10-11 10:13:16] 2025-10-11 14:12:24,138 | INFO     | chi2: 0.06311194871506787
[2025-10-11 10:13:16] 2025-10-11 14:12:24,138 | INFO     | current chi2=0.06311194871506787 (change=95.42115505619716 %)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,138 | INFO     | sum of square deviations: 5263211327.2295475
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | sum of deviations: -7661433398.463034
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | mean x: 1760184076.2140079
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | mean y: 2577410.5175097277
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | -- intersect: 2564802681.461993
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | intersect: 2564802681.461993
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | chi2: 0.05363264871974727
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | current chi2=0.05363264871974727 (change=15.01981825678825 %)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,140 | INFO     | left removable region: 20
[2025-10-11 10:13:16] 2025-10-11 14:12:24,141 | INFO     | sum of square deviations: 4340107108.780067
[2025-10-11 10:13:16] 2025-10-11 14:12:24,142 | INFO     | sum of deviations: 2805690683.908712
[2025-10-11 10:13:16] 2025-10-11 14:12:24,142 | INFO     | mean x: 1760184198.2157676
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | mean y: 2572174.65560166
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | -- intersect: -1135310435.8695207
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | intersect: -1135310435.8695207
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | chi2: 0.0283627899193492
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | -- intersect: -1135310435.8695207
[2025-10-11 10:13:16] 2025-10-11 14:12:24,143 | INFO     | current memory leak: 0.65 B/s (using 241 data points, chi2=0.03)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | could have reported an average CPU frequency of 3170 MHz (12 samples)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | ..............................
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | . Timing measurements:
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | . get job = 0 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | . initial setup = 6 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | . payload setup = 31 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,144 | INFO     | . stage-in = 0 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,145 | INFO     | . payload execution = 16289 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,145 | INFO     | . stage-out = 2 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,145 | INFO     | . log creation = 0 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,145 | INFO     | ..............................
[2025-10-11 10:13:16] 2025-10-11 14:12:24,220 | INFO     | 
[2025-10-11 10:13:16] 2025-10-11 14:12:24,222 | INFO     | job summary report
[2025-10-11 10:13:16] 2025-10-11 14:12:24,222 | INFO     | --------------------------------------------------
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | PanDA job id: 6838000598
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | task id: 46676269
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | errors: (none)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | pilot state: finished 
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | transexitcode: 0
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | exeerrorcode: 0
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | exeerrordiag: 
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | exitcode: 0
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | exitmsg: OK
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | cpuconsumptiontime: 34218 s
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | nevents: 400
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | neventsw: 0
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | pid: 3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | pgrp: 3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | corecount: 9
[2025-10-11 10:13:16] 2025-10-11 14:12:24,223 | INFO     | event service: False
[2025-10-11 10:13:16] 2025-10-11 14:12:24,224 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 36: 2349231, 45: 2349387, 16325: 2381330, 16327: 2390328, 16329: 2390384, 16336: 2390578}
[2025-10-11 10:13:16] 2025-10-11 14:12:24,224 | INFO     | --------------------------------------------------
[2025-10-11 10:13:16] 2025-10-11 14:12:24,224 | INFO     | 
[2025-10-11 10:13:16] 2025-10-11 14:12:24,224 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 10:13:16] 2025-10-11 14:12:24,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | job 6838000598 has completed (purged errors)
[2025-10-11 10:13:16] 2025-10-11 14:12:24,248 | INFO     | overall cleanup function is called
[2025-10-11 10:13:16] 2025-10-11 14:12:25,256 | INFO     | --- collectZombieJob: --- 10, [3174143]
[2025-10-11 10:13:16] 2025-10-11 14:12:25,256 | INFO     | zombie collector waiting for pid 3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:25,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:13:16] 2025-10-11 14:12:25,257 | INFO     | collected zombie processes
[2025-10-11 10:13:16] 2025-10-11 14:12:25,257 | INFO     | will attempt to kill all subprocesses of pid=3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:25,498 | INFO     | process IDs to be killed: [3174143] (in reverse order)
[2025-10-11 10:13:16] 2025-10-11 14:12:25,593 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:13:16] 2025-10-11 14:12:25,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:13:16] 2025-10-11 14:12:25,608 | INFO     | did not find any defunct processes belonging to 3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:25,619 | INFO     | did not find any defunct processes belonging to 3174143
[2025-10-11 10:13:16] 2025-10-11 14:12:25,619 | INFO     | ready for new job
[2025-10-11 10:13:16] 2025-10-11 14:12:25,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:13:16] 2025-10-11 14:12:25,622 | INFO     | ***************************************
[2025-10-11 10:13:16] 2025-10-11 14:12:25,622 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:13:16] 2025-10-11 14:12:25,622 | INFO     | ***************************************
[2025-10-11 10:13:16] 2025-10-11 14:12:25,622 | INFO     | 
[2025-10-11 10:13:16] 2025-10-11 14:12:25,626 | INFO     | architecture information:
[2025-10-11 10:13:16] 2025-10-11 14:12:25,626 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:13:16] 2025-10-11 14:12:25,645 | INFO     | cat /etc/os-release:
[2025-10-11 10:13:16] NAME="CentOS Linux"
[2025-10-11 10:13:16] VERSION="7 (Core)"
[2025-10-11 10:13:16] ID="centos"
[2025-10-11 10:13:16] ID_LIKE="rhel fedora"
[2025-10-11 10:13:16] VERSION_ID="7"
[2025-10-11 10:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:13:16] ANSI_COLOR="0;31"
[2025-10-11 10:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:13:16] HOME_URL="https://www.centos.org/"
[2025-10-11 10:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:13:16] 
[2025-10-11 10:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:13:16] 
[2025-10-11 10:13:16] 2025-10-11 14:12:25,646 | INFO     | ***************************************
[2025-10-11 10:13:16] 2025-10-11 14:12:26,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 10:13:16] 2025-10-11 14:12:26,167 | INFO     | sufficient remaining disk space (85052096512 B)
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | INFO     | update_server=False
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:13:16] 2025-10-11 14:12:26,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:13:16] 2025-10-11 14:12:26,346 | INFO     | all payload control threads have been joined
[2025-10-11 10:13:16] 2025-10-11 14:12:26,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 10:13:16] 2025-10-11 14:12:26,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 10:13:16] 2025-10-11 14:12:26,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:13:16] 2025-10-11 14:12:26,476 | INFO     | will abort loop
[2025-10-11 10:13:16] 2025-10-11 14:12:27,067 | INFO     | all data control threads have been joined
[2025-10-11 10:13:16] 2025-10-11 14:12:27,194 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,195 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,352 | INFO     | [payload] control thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:13:16] 2025-10-11 14:12:27,396 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,410 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,481 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,641 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:27,778 | INFO     | all job control threads have been joined
[2025-10-11 10:13:16] 2025-10-11 14:12:27,814 | INFO     | [job] validate thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,073 | INFO     | [data] control thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,175 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,225 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,368 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,470 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:28,783 | INFO     | [job] control thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:31,367 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:36,502 | INFO     | job.realtimelogging is not enabled
[2025-10-11 10:13:16] 2025-10-11 14:12:37,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:13:16] 2025-10-11 14:12:55,672 | INFO     | 16430s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 10:13:16] 2025-10-11 14:12:57,354 | INFO     | PID=3162171 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:13:16] 2025-10-11 14:12:57,355 | INFO     | .. there are 11 such processes running
[2025-10-11 10:13:16] 2025-10-11 14:12:57,355 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:13:16] 2025-10-11 14:12:57,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:13:16] 2025-10-11 14:12:57,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:13:16] 2025-10-11 14:13:09,862 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:13:16] 2025-10-11 14:13:11,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852133959488)>', '<ExcThread(monitor, started 139851106084608)>']
[2025-10-11 10:13:16] 2025-10-11 14:13:11,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:13:16] 2025-10-11 14:13:11,441 | INFO     | [monitor] control thread has ended
[2025-10-11 10:13:16] 2025-10-11 14:13:16,279 | INFO     | all workflow threads have been joined
[2025-10-11 10:13:16] 2025-10-11 14:13:16,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:13:16] 2025-10-11 14:13:16,280 | INFO     | traces error code: 0
[2025-10-11 10:13:16] 2025-10-11 14:13:16,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:13:16] 2025-10-11 14:13:16,615 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:13:16] 2025-10-11 14:13:16,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:13:16] 2025-10-11 14:13:16,629 [wrapper] pilotpid: 3162171
[2025-10-11 10:13:16] 2025-10-11 14:13:16,631 [wrapper] Pilot exit status: 0
[2025-10-11 10:13:16] 2025-10-11 14:13:16,655 [wrapper] pandaids: 6838000598
[2025-10-11 10:13:16] 2025-10-11 14:13:16,749 [wrapper] cleanup supervisor_pilot 3622774 3162172
[2025-10-11 10:13:16] 2025-10-11 14:13:16,773 [wrapper] Test setup, not cleaning
[2025-10-11 10:13:16] 2025-10-11 14:13:16,791 [wrapper] apfmon messages muted
[2025-10-11 10:13:16] 2025-10-11 14:13:16,812 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:13:16] 2025-10-11 14:13:16,827 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:13:16]  *** Error codes and diagnostics ***
[2025-10-11 10:13:16]     "exeErrorCode": 0,
[2025-10-11 10:13:16]     "exeErrorDiag": "",
[2025-10-11 10:13:16]     "pilotErrorCode": 0,
[2025-10-11 10:13:16]     "pilotErrorDiag": "",
[2025-10-11 10:13:16]  *** Listing of results directory ***
[2025-10-11 10:13:17] total 411152
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 22:50 pilot3.tar.gz
[2025-10-11 10:13:17] -rwx------. 1 boincer umatlas     36292 Oct 10 23:06 runpilot2-wrapper.sh
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 23:06 queuedata.json
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas       100 Oct 11 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:13:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 05:37 run_atlas
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas       105 Oct 11 05:37 job.xml
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas 220398113 Oct 11 05:37 EVNT.46676267._002012.pool.root.1
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:37 start_atlas.sh
[2025-10-11 10:13:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 05:37 shared
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 05:37 input.tar.gz
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas         0 Oct 11 05:37 boinc_lockfile
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 05:37 pandaJob.out
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas    975525 Oct 11 05:38 agis_schedconf.cvmfs.json
[2025-10-11 10:13:17] drwx------. 5 boincer umatlas      4096 Oct 11 05:38 pilot3
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas      6899 Oct 11 10:09 init_data.xml
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas 191223950 Oct 11 10:11 HITS.46676269._049970.pool.root.1
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas       531 Oct 11 10:11 boinc_task_state.xml
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas        95 Oct 11 10:12 pilot_heartbeat.json
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas      1036 Oct 11 10:12 memory_monitor_summary.json
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas    500050 Oct 11 10:12 log.46676269._049970.job.log.tgz.1
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas      7782 Oct 11 10:12 heartbeat.json
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 10:13 boinc_mmap_file
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas        28 Oct 11 10:13 wrapper_checkpoint.txt
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas      5198 Oct 11 10:13 pilotlog.txt
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas   2242431 Oct 11 10:13 log.46676269._049970.job.log.1
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas       357 Oct 11 10:13 output.list
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas       620 Oct 11 10:13 runtime_log
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas   2764800 Oct 11 10:13 result.tar.gz
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 10:13 runtime_log.err
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas       655 Oct 11 10:13 fbrMDmt6eR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi1QMDm4TGROn.diag
[2025-10-11 10:13:17] -rw-r--r--. 1 boincer umatlas     21238 Oct 11 10:13 stderr.txt
[2025-10-11 10:13:17] HITS file was successfully produced:
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas 191223950 Oct 11 10:11 shared/HITS.pool.root.1
[2025-10-11 10:13:17]  *** Contents of shared directory: ***
[2025-10-11 10:13:17] total 405264
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas 220398113 Oct 11 05:37 ATLAS.root_0
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:37 start_atlas.sh
[2025-10-11 10:13:17] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 05:37 input.tar.gz
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas 191223950 Oct 11 10:11 HITS.pool.root.1
[2025-10-11 10:13:17] -rw-------. 1 boincer umatlas   2764800 Oct 11 10:13 result.tar.gz
10:13:18 (3158344): run_atlas exited; CPU time 34400.612203
10:13:18 (3158344): called boinc_finish(0)

</stderr_txt>
]]>

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