Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:31:57 (2401868): wrapper (7.7.26015): starting
08:31:57 (2401868): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 08:31:57] Arguments: --nthreads 12
[2025-10-11 08:31:57] Threads: 12
[2025-10-11 08:31:57] Checking for CVMFS
[2025-10-11 08:31:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:31:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:31:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:31:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:31:58] 2.11.0.0 3299214 1385 84384 151577 3 188 5072568 6144001 14724 130560 0 27240491 100.000 51014 211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 08:31:58] CVMFS is ok
[2025-10-11 08:31:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:31:58] Checking for apptainer binary...
[2025-10-11 08:31:58] apptainer is not installed, using version from CVMFS
[2025-10-11 08:31:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:31:58] radiat0r
[2025-10-11 08:31:58] apptainer works
[2025-10-11 08:31:58] Set ATHENA_PROC_NUMBER=12
[2025-10-11 08:31:58] Set ATHENA_CORE_NUMBER=12
[2025-10-11 08:31:58] Starting ATLAS job with PandaID=6837874328
[2025-10-11 08:31:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:23:23]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:23:23] 2025-10-11 09:22:05,395 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 09:23:23] 2025-10-11 09:22:06,522 | INFO     | time since job start (2993s) is within the limit (172800.0s)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,727 | INFO     | job 6837874328 has state=finished
[2025-10-11 09:23:23] 2025-10-11 09:22:07,731 | INFO     | preparing for final server update for job 6837874328 in state='finished'
[2025-10-11 09:23:23] 2025-10-11 09:22:07,732 | INFO     | this job has now completed (state=finished)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,733 | INFO     | log transfer has been attempted: DONE
[2025-10-11 09:23:23] 2025-10-11 09:22:07,733 | INFO     | job 6837874328 has finished - writing final server update
[2025-10-11 09:23:23] 2025-10-11 09:22:07,734 | INFO     | total number of processed events: 400 (read)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,736 | INFO     | executing command: lscpu
[2025-10-11 09:23:23] 2025-10-11 09:22:07,786 | WARNING  | process 2414655 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 09:23:23] 2025-10-11 09:22:07,787 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6837874328/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,788 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6837874328/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,789 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-11 09:23:23] 2025-10-11 09:22:07,789 | WARNING  | maxPSS not found in memory monitor output
[2025-10-11 09:23:23] 2025-10-11 09:22:07,790 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4240278 B
[2025-10-11 09:23:23] 2025-10-11 09:22:07,790 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15781 B
[2025-10-11 09:23:23] 2025-10-11 09:22:07,791 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-11 09:23:23] 2025-10-11 09:22:07,821 | INFO     | sufficient remaining disk space (1725482139648 B)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,822 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,823 | INFO     | size of work directory /var/lib/boinc/slots/12/PanDA_Pilot-6837874328: 4526855 B (within 2537553920 B limit)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,823 | INFO     | pfn file=/var/lib/boinc/slots/12/PanDA_Pilot-6837874328/HITS.46676269._046850.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,823 | INFO     | total size of present files: 0 B (workdir size: 4526855 B)
[2025-10-11 09:23:23] 2025-10-11 09:22:07,823 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/12/PanDA_Pilot-6837874328/HITS.46676269._046850.pool.root.1 since it does not exist
[2025-10-11 09:23:23] 2025-10-11 09:22:07,936 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 09:23:23] 2025-10-11 09:22:08,528 | INFO     | time since job start (2995s) is within the limit (172800.0s)
[2025-10-11 09:23:23] 2025-10-11 09:22:08,661 | INFO     | number of running child processes to parent process 2414655: 1
[2025-10-11 09:23:23] 2025-10-11 09:22:08,662 | INFO     | maximum number of monitored processes: 6
[2025-10-11 09:23:23] 2025-10-11 09:22:10,532 | INFO     | time since job start (2997s) is within the limit (172800.0s)
[2025-10-11 09:23:23] 2025-10-11 09:22:11,165 | INFO     | monitor loop #209: job 0:6837874328 is in state 'finished'
[2025-10-11 09:23:23] 2025-10-11 09:22:11,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:23:23] 2025-10-11 09:22:12,535 | INFO     | time since job start (2999s) is within the limit (172800.0s)
[2025-10-11 09:23:23] 2025-10-11 09:22:13,668 | INFO     | monitor loop #210: job 0:6837874328 is in state 'finished'
[2025-10-11 09:23:23] 2025-10-11 09:22:13,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,540 | INFO     | time since job start (3001s) is within the limit (172800.0s)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,696 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 09:23:23] 2025-10-11 09:22:14,758 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2390.5152539062487
[2025-10-11 09:23:23] 2025-10-11 09:22:14,809 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6837874328/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,810 | INFO     | extracted standard info from prmon json
[2025-10-11 09:23:23] 2025-10-11 09:22:14,810 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:23:23] 2025-10-11 09:22:14,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:23:23] 2025-10-11 09:22:14,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:23:23] 2025-10-11 09:22:14,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:23:23] 2025-10-11 09:22:14,812 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | sum of square deviations: 22960430.5
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | sum of deviations: 57997275.00000007
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | mean x: 1760173122.5
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | mean y: 2681402.6666666665
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | -- intersect: -4443456688.39575
[2025-10-11 09:23:23] 2025-10-11 09:22:14,813 | INFO     | intersect: -4443456688.39575
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | chi2: 0.0016547295541482722
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | -- intersect: -4443456688.39575
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | current memory leak: 2.53 B/s (using 42 data points, chi2=0.00)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | could have reported an average CPU frequency of 2374 MHz (5 samples)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | ..............................
[2025-10-11 09:23:23] 2025-10-11 09:22:14,814 | INFO     | . Timing measurements:
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . get job = 0 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . initial setup = 1 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . payload setup = 8 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . stage-in = 0 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . payload execution = 2958 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . stage-out = 1 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | . log creation = 0 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,815 | INFO     | ..............................
[2025-10-11 09:23:23] 2025-10-11 09:22:14,925 | INFO     | 
[2025-10-11 09:23:23] 2025-10-11 09:22:14,925 | INFO     | job summary report
[2025-10-11 09:23:23] 2025-10-11 09:22:14,925 | INFO     | --------------------------------------------------
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | PanDA job id: 6837874328
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | task id: 46676269
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | errors: (none)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | pilot state: finished 
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | transexitcode: 0
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | exeerrorcode: 0
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | exeerrordiag: 
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | exitcode: 0
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | exitmsg: OK
[2025-10-11 09:23:23] 2025-10-11 09:22:14,926 | INFO     | cpuconsumptiontime: 31038 s
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | nevents: 400
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | neventsw: 0
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | pid: 2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | pgrp: 2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | corecount: 12
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | event service: False
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 2970: 2374656, 2972: 2383656, 2974: 2383840, 2983: 2384094}
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | --------------------------------------------------
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | 
[2025-10-11 09:23:23] 2025-10-11 09:22:14,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-11 09:23:23] 2025-10-11 09:22:14,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | job 6837874328 has completed (purged errors)
[2025-10-11 09:23:23] 2025-10-11 09:22:14,961 | INFO     | overall cleanup function is called
[2025-10-11 09:23:23] 2025-10-11 09:22:15,972 | INFO     | --- collectZombieJob: --- 10, [2414655]
[2025-10-11 09:23:23] 2025-10-11 09:22:15,972 | INFO     | zombie collector waiting for pid 2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:15,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:23:23] 2025-10-11 09:22:15,973 | INFO     | collected zombie processes
[2025-10-11 09:23:23] 2025-10-11 09:22:15,973 | INFO     | will attempt to kill all subprocesses of pid=2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:16,820 | INFO     | process IDs to be killed: [2414655] (in reverse order)
[2025-10-11 09:23:23] 2025-10-11 09:22:17,088 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:23:23] 2025-10-11 09:22:17,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:23:23] 2025-10-11 09:22:17,117 | INFO     | did not find any defunct processes belonging to 2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:17,144 | INFO     | did not find any defunct processes belonging to 2414655
[2025-10-11 09:23:23] 2025-10-11 09:22:17,144 | INFO     | ready for new job
[2025-10-11 09:23:23] 2025-10-11 09:22:17,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:23:23] 2025-10-11 09:22:17,148 | INFO     | ***************************************
[2025-10-11 09:23:23] 2025-10-11 09:22:17,148 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:23:23] 2025-10-11 09:22:17,148 | INFO     | ***************************************
[2025-10-11 09:23:23] 2025-10-11 09:22:17,148 | INFO     | 
[2025-10-11 09:23:23] 2025-10-11 09:22:17,190 | INFO     | architecture information:
[2025-10-11 09:23:23] 2025-10-11 09:22:17,191 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:23:23] 2025-10-11 09:22:17,218 | INFO     | cat /etc/os-release:
[2025-10-11 09:23:23] NAME="CentOS Linux"
[2025-10-11 09:23:23] VERSION="7 (Core)"
[2025-10-11 09:23:23] ID="centos"
[2025-10-11 09:23:23] ID_LIKE="rhel fedora"
[2025-10-11 09:23:23] VERSION_ID="7"
[2025-10-11 09:23:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:23:23] ANSI_COLOR="0;31"
[2025-10-11 09:23:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:23:23] HOME_URL="https://www.centos.org/"
[2025-10-11 09:23:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:23:23] 
[2025-10-11 09:23:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:23:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:23:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:23:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:23:23] 
[2025-10-11 09:23:23] 2025-10-11 09:22:17,218 | INFO     | ***************************************
[2025-10-11 09:23:23] 2025-10-11 09:22:17,722 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-11 09:23:23] 2025-10-11 09:22:17,750 | INFO     | sufficient remaining disk space (1725478993920 B)
[2025-10-11 09:23:23] 2025-10-11 09:22:17,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:23:23] 2025-10-11 09:22:17,751 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:23:23] 2025-10-11 09:22:17,751 | INFO     | update_server=False
[2025-10-11 09:23:23] 2025-10-11 09:22:17,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:23:23] 2025-10-11 09:22:17,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:23:23] 2025-10-11 09:22:17,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:23:23] 2025-10-11 09:22:17,753 | INFO     | aborting loop
[2025-10-11 09:23:23] 2025-10-11 09:22:18,013 | INFO     | all job control threads have been joined
[2025-10-11 09:23:23] 2025-10-11 09:22:18,387 | INFO     | all data control threads have been joined
[2025-10-11 09:23:23] 2025-10-11 09:22:18,754 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:18,758 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:18,837 | INFO     | all payload control threads have been joined
[2025-10-11 09:23:23] 2025-10-11 09:22:19,018 | INFO     | [job] control thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,154 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,392 | INFO     | [data] control thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,414 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,454 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,520 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,561 | INFO     | [job] validate thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,758 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,838 | INFO     | [payload] control thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,922 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:19,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:23:23] 2025-10-11 09:22:19,962 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:20,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:23:23] 2025-10-11 09:22:20,942 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:24,507 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:28,242 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:23:23] 2025-10-11 09:22:29,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:23:23] 2025-10-11 09:22:48,633 | INFO     | PID=2406542 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 09:23:23] 2025-10-11 09:22:48,633 | INFO     | .. there are 16 such processes running
[2025-10-11 09:23:23] 2025-10-11 09:22:48,634 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:23:23] 2025-10-11 09:22:48,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:23:23] 2025-10-11 09:22:48,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:23:23] 2025-10-11 09:23:17,314 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:23:23] 2025-10-11 09:23:18,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728016222016)>', '<ExcThread(monitor, started 139727223121664)>']
[2025-10-11 09:23:23] 2025-10-11 09:23:18,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:23:23] 2025-10-11 09:23:18,760 | INFO     | [monitor] control thread has ended
[2025-10-11 09:23:23] 2025-10-11 09:23:23,054 | INFO     | all workflow threads have been joined
[2025-10-11 09:23:23] 2025-10-11 09:23:23,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:23:23] 2025-10-11 09:23:23,055 | INFO     | traces error code: 0
[2025-10-11 09:23:23] 2025-10-11 09:23:23,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:23:23] 2025-10-11 09:23:23,246 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:23:23] 2025-10-11 09:23:23,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:23:23] 2025-10-11 09:23:23,255 [wrapper] pilotpid: 2406542
[2025-10-11 09:23:23] 2025-10-11 09:23:23,258 [wrapper] Pilot exit status: 0
[2025-10-11 09:23:23] 2025-10-11 09:23:23,272 [wrapper] pandaids: 6837874328
[2025-10-11 09:23:23] 2025-10-11 09:23:23,457 [wrapper] cleanup supervisor_pilot 2811803 2406543
[2025-10-11 09:23:23] 2025-10-11 09:23:23,461 [wrapper] Test setup, not cleaning
[2025-10-11 09:23:23] 2025-10-11 09:23:23,465 [wrapper] apfmon messages muted
[2025-10-11 09:23:23] 2025-10-11 09:23:23,468 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:23:23] 2025-10-11 09:23:23,471 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:23:23]  *** Error codes and diagnostics ***
[2025-10-11 09:23:23]     "exeErrorCode": 0,
[2025-10-11 09:23:23]     "exeErrorDiag": "",
[2025-10-11 09:23:23]     "pilotErrorCode": 0,
[2025-10-11 09:23:23]     "pilotErrorDiag": "",
[2025-10-11 09:23:23]  *** Listing of results directory ***
[2025-10-11 09:23:23] total 409672
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc    557409 Oct 10 22:56 pilot3.tar.gz
[2025-10-11 09:23:23] -rwx------ 1 boinc boinc     36292 Oct 10 23:15 runpilot2-wrapper.sh
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:15 queuedata.json
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc       100 Oct 11 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:23:23] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 08:31 run_atlas
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc       105 Oct 11 08:31 job.xml
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:31 start_atlas.sh
[2025-10-11 09:23:23] drwxrwx--x 2 boinc boinc      4096 Oct 11 08:31 shared
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc    569676 Oct 11 08:31 input.tar.gz
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc 220214215 Oct 11 08:31 EVNT.46676267._001892.pool.root.1
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:31 boinc_setup_complete
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc      9396 Oct 11 08:31 init_data.xml
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:31 boinc_lockfile
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc      2549 Oct 11 08:31 pandaJob.out
[2025-10-11 09:23:23] -rw------- 1 boinc boinc    975509 Oct 11 08:32 agis_schedconf.cvmfs.json
[2025-10-11 09:23:23] -rw------- 1 boinc boinc   1560580 Oct 11 08:32 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:23:23] drwx------ 5 boinc boinc      4096 Oct 11 08:32 pilot3
[2025-10-11 09:23:23] -rw------- 1 boinc boinc 193755906 Oct 11 09:21 HITS.46676269._046850.pool.root.1
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc       529 Oct 11 09:21 boinc_task_state.xml
[2025-10-11 09:23:23] -rw------- 1 boinc boinc      1025 Oct 11 09:21 memory_monitor_summary.json
[2025-10-11 09:23:23] -rw------- 1 boinc boinc        95 Oct 11 09:22 pilot_heartbeat.json
[2025-10-11 09:23:23] -rw------- 1 boinc boinc    363455 Oct 11 09:22 log.46676269._046850.job.log.tgz.1
[2025-10-11 09:23:23] -rw------- 1 boinc boinc      7738 Oct 11 09:22 heartbeat.json
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:23 boinc_mmap_file
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc        27 Oct 11 09:23 wrapper_checkpoint.txt
[2025-10-11 09:23:23] -rw------- 1 boinc boinc      4900 Oct 11 09:23 pilotlog.txt
[2025-10-11 09:23:23] -rw------- 1 boinc boinc    448931 Oct 11 09:23 log.46676269._046850.job.log.1
[2025-10-11 09:23:23] -rw------- 1 boinc boinc       357 Oct 11 09:23 output.list
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:23 runtime_log
[2025-10-11 09:23:23] -rw------- 1 boinc boinc    829440 Oct 11 09:23 result.tar.gz
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc      8672 Oct 11 09:23 runtime_log.err
[2025-10-11 09:23:23] -rw------- 1 boinc boinc       643 Oct 11 09:23 fepMDmlVbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1geNDm2ULiAo.diag
[2025-10-11 09:23:23] -rw-r--r-- 1 boinc boinc     22146 Oct 11 09:23 stderr.txt
[2025-10-11 09:23:23] HITS file was successfully produced:
[2025-10-11 09:23:23] -rw------- 1 boinc boinc 193755906 Oct 11 09:21 shared/HITS.pool.root.1
[2025-10-11 09:23:23]  *** Contents of shared directory: ***
[2025-10-11 09:23:23] total 405668
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:31 start_atlas.sh
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc    569676 Oct 11 08:31 input.tar.gz
[2025-10-11 09:23:23] -rw-r--r-- 2 boinc boinc 220214215 Oct 11 08:31 ATLAS.root_0
[2025-10-11 09:23:23] -rw------- 1 boinc boinc 193755906 Oct 11 09:21 HITS.pool.root.1
[2025-10-11 09:23:23] -rw------- 1 boinc boinc    829440 Oct 11 09:23 result.tar.gz
09:23:24 (2401868): run_atlas exited; CPU time 31238.296618
09:23:24 (2401868): called boinc_finish(0)

</stderr_txt>
]]>

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