Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:11:44 (3507744): wrapper (7.7.26015): starting
06:11:44 (3507744): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 06:11:44] Arguments: --nthreads 4
[2025-10-11 06:11:44] Threads: 4
[2025-10-11 06:11:44] Checking for CVMFS
[2025-10-11 06:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:11:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:11:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:11:44] 2.11.5.0 2691367 2819 106424 151579 3 188 2838043 4096000 4798 130560 0 13948298 99.998 96131 2570 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 06:11:44] CVMFS is ok
[2025-10-11 06:11:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:11:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 06:11:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 06:11:44] Further information can be found at the LHC@home message board.
[2025-10-11 06:11:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:11:44] Checking for apptainer binary...
[2025-10-11 06:11:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:11:44] Running /usr/bin/apptainer --version
[2025-10-11 06:11:44] apptainer version 1.4.3
[2025-10-11 06:11:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:11:45] x32-linux3
[2025-10-11 06:11:45] apptainer works
[2025-10-11 06:11:45] Set ATHENA_PROC_NUMBER=4
[2025-10-11 06:11:45] Set ATHENA_CORE_NUMBER=4
[2025-10-11 06:11:45] Starting ATLAS job with PandaID=6837730923
[2025-10-11 06:11:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:17:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:17:11] 2025-10-11 12:16:30,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:17:11] 2025-10-11 12:16:30,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:17:11] 2025-10-11 12:16:30,999 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | sum of deviations: 5257620317.000001
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | mean x: 1760181254.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | mean y: 2266697.0975609757
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | -- intersect: -16036891102.748474
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | intersect: -16036891102.748474
[2025-10-11 08:17:11] 2025-10-11 12:16:31,000 | INFO     | chi2: 1.774197801765691
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | sum of deviations: 11764067770.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | mean x: 1760181101.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | mean y: 2280869.186440678
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | -- intersect: -40644075177.16527
[2025-10-11 08:17:11] 2025-10-11 12:16:31,001 | INFO     | intersect: -40644075177.16527
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | chi2: 1.1021599617672195
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | current chi2=1.1021599617672195 (change=37.87840562814675 %)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | sum of deviations: 11181879317.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | mean x: 1760180949.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | mean y: 2279437.96460177
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | -- intersect: -43991611660.85264
[2025-10-11 08:17:11] 2025-10-11 12:16:31,002 | INFO     | intersect: -43991611660.85264
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | chi2: 1.1036554830492222
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | current chi2=1.1036554830492222 (change=-0.13569003900348167 %)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | right removable region: 112
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | sum of deviations: -6142364012.000001
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | mean x: 1760181406.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,003 | INFO     | mean y: 2291755.4576271186
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | -- intersect: 21224947280.78856
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | intersect: 21224947280.78856
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | chi2: 0.6960604625329117
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | current chi2=0.6960604625329117 (change=60.767595256842924 %)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | sum of deviations: -5592515868.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | mean x: 1760181559.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,004 | INFO     | mean y: 2290394.530973451
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | -- intersect: 22005444994.52791
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | intersect: 22005444994.52791
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | chi2: 0.6964443589645636
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | current chi2=0.6964443589645636 (change=-0.055152742084352974 %)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | left removable region: 20
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | sum of deviations: 623332007.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | mean x: 1760181528.5
[2025-10-11 08:17:11] 2025-10-11 12:16:31,005 | INFO     | mean y: 2306928.684782609
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | -- intersect: -4542195030.937149
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | intersect: -4542195030.937149
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | chi2: 5.898251822246603e-05
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | -- intersect: -4542195030.937149
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | current memory leak: 2.58 B/s (using 92 data points, chi2=0.00)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | could have reported an average CPU frequency of 3746 MHz (8 samples)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | ..............................
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | . Timing measurements:
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | . get job = 0 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | . initial setup = 1 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | . payload setup = 3 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,006 | INFO     | . stage-in = 0 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,007 | INFO     | . payload execution = 7456 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,007 | INFO     | . stage-out = 0 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,007 | INFO     | . log creation = 0 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,007 | INFO     | ..............................
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | 
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | job summary report
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | --------------------------------------------------
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | PanDA job id: 6837730923
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | task id: 46676269
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | errors: (none)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | pilot state: finished 
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | transexitcode: 0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | exeerrorcode: 0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | exeerrordiag: 
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | exitcode: 0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | exitmsg: OK
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | cpuconsumptiontime: 28838 s
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | nevents: 400
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | neventsw: 0
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | pid: 3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | pgrp: 3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | corecount: 4
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | event service: False
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | sizes: {0: 2348807, 3: 2349069, 11: 2349097, 7460: 2376595, 7461: 2385691, 7464: 2385829}
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | --------------------------------------------------
[2025-10-11 08:17:11] 2025-10-11 12:16:31,553 | INFO     | 
[2025-10-11 08:17:11] 2025-10-11 12:16:31,554 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | job 6837730923 has completed (purged errors)
[2025-10-11 08:17:11] 2025-10-11 12:16:31,571 | INFO     | overall cleanup function is called
[2025-10-11 08:17:11] 2025-10-11 12:16:32,579 | INFO     | --- collectZombieJob: --- 10, [3529541]
[2025-10-11 08:17:11] 2025-10-11 12:16:32,579 | INFO     | zombie collector waiting for pid 3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:32,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:17:11] 2025-10-11 12:16:32,579 | INFO     | collected zombie processes
[2025-10-11 08:17:11] 2025-10-11 12:16:32,579 | INFO     | will attempt to kill all subprocesses of pid=3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:32,710 | INFO     | process IDs to be killed: [3529541] (in reverse order)
[2025-10-11 08:17:11] 2025-10-11 12:16:32,761 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:17:11] 2025-10-11 12:16:32,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:17:11] 2025-10-11 12:16:32,765 | INFO     | did not find any defunct processes belonging to 3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:32,769 | INFO     | did not find any defunct processes belonging to 3529541
[2025-10-11 08:17:11] 2025-10-11 12:16:32,769 | INFO     | ready for new job
[2025-10-11 08:17:11] 2025-10-11 12:16:32,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:17:11] 2025-10-11 12:16:32,771 | INFO     | ***************************************
[2025-10-11 08:17:11] 2025-10-11 12:16:32,771 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:17:11] 2025-10-11 12:16:32,771 | INFO     | ***************************************
[2025-10-11 08:17:11] 2025-10-11 12:16:32,771 | INFO     | 
[2025-10-11 08:17:11] 2025-10-11 12:16:32,794 | INFO     | architecture information:
[2025-10-11 08:17:11] 2025-10-11 12:16:32,794 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:17:11] 2025-10-11 12:16:32,805 | INFO     | cat /etc/os-release:
[2025-10-11 08:17:11] NAME="CentOS Linux"
[2025-10-11 08:17:11] VERSION="7 (Core)"
[2025-10-11 08:17:11] ID="centos"
[2025-10-11 08:17:11] ID_LIKE="rhel fedora"
[2025-10-11 08:17:11] VERSION_ID="7"
[2025-10-11 08:17:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:17:11] ANSI_COLOR="0;31"
[2025-10-11 08:17:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:17:11] HOME_URL="https://www.centos.org/"
[2025-10-11 08:17:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:17:11] 
[2025-10-11 08:17:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:17:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:17:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:17:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:17:11] 
[2025-10-11 08:17:11] 2025-10-11 12:16:32,806 | INFO     | ***************************************
[2025-10-11 08:17:11] 2025-10-11 12:16:33,308 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-11 08:17:11] 2025-10-11 12:16:33,320 | INFO     | sufficient remaining disk space (396871335936 B)
[2025-10-11 08:17:11] 2025-10-11 12:16:33,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:17:11] 2025-10-11 12:16:33,321 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:17:11] 2025-10-11 12:16:33,321 | INFO     | update_server=False
[2025-10-11 08:17:11] 2025-10-11 12:16:33,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:17:11] 2025-10-11 12:16:33,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:17:11] 2025-10-11 12:16:33,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:17:11] 2025-10-11 12:16:33,392 | INFO     | aborting loop
[2025-10-11 08:17:11] 2025-10-11 12:16:33,492 | INFO     | all job control threads have been joined
[2025-10-11 08:17:11] 2025-10-11 12:16:33,556 | INFO     | all data control threads have been joined
[2025-10-11 08:17:11] 2025-10-11 12:16:34,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:17:11] 2025-10-11 12:16:34,326 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:34,368 | INFO     | all payload control threads have been joined
[2025-10-11 08:17:11] 2025-10-11 12:16:34,396 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:34,496 | INFO     | [job] control thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:34,560 | INFO     | [data] control thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,080 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,172 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,326 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,373 | INFO     | [payload] control thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,638 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,684 | INFO     | [job] validate thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,772 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:35,821 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:36,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:17:11] 2025-10-11 12:16:37,083 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:38,220 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:16:44,018 | INFO     | job.realtimelogging is not enabled
[2025-10-11 08:17:11] 2025-10-11 12:16:45,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:17:11] 2025-10-11 12:17:03,193 | INFO     | PID=3511660 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:17:11] 2025-10-11 12:17:03,193 | INFO     | .. there are 8 such processes running
[2025-10-11 08:17:11] 2025-10-11 12:17:03,194 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:17:11] 2025-10-11 12:17:03,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:17:11] 2025-10-11 12:17:03,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:17:11] 2025-10-11 12:17:04,652 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:17:11] 2025-10-11 12:17:06,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271343273792)>', '<ExcThread(monitor, started 140271031392000)>']
[2025-10-11 08:17:11] 2025-10-11 12:17:07,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:17:11] 2025-10-11 12:17:07,210 | INFO     | [monitor] control thread has ended
[2025-10-11 08:17:11] 2025-10-11 12:17:11,684 | INFO     | all workflow threads have been joined
[2025-10-11 08:17:11] 2025-10-11 12:17:11,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:17:11] 2025-10-11 12:17:11,684 | INFO     | traces error code: 0
[2025-10-11 08:17:11] 2025-10-11 12:17:11,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:17:11] 2025-10-11 12:17:11,765 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:17:11] 2025-10-11 12:17:11,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:17:11] 2025-10-11 12:17:11,767 [wrapper] pilotpid: 3511660
[2025-10-11 08:17:11] 2025-10-11 12:17:11,769 [wrapper] Pilot exit status: 0
[2025-10-11 08:17:11] 2025-10-11 12:17:11,776 [wrapper] pandaids: 6837730923
[2025-10-11 08:17:11] 2025-10-11 12:17:11,804 [wrapper] cleanup supervisor_pilot 3704797 3511662
[2025-10-11 08:17:11] 2025-10-11 12:17:11,806 [wrapper] Test setup, not cleaning
[2025-10-11 08:17:11] 2025-10-11 12:17:11,807 [wrapper] apfmon messages muted
[2025-10-11 08:17:11] 2025-10-11 12:17:11,809 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:17:11] 2025-10-11 12:17:11,810 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:17:11]  *** Error codes and diagnostics ***
[2025-10-11 08:17:11]     "exeErrorCode": 0,
[2025-10-11 08:17:11]     "exeErrorDiag": "",
[2025-10-11 08:17:11]     "pilotErrorCode": 0,
[2025-10-11 08:17:11]     "pilotErrorDiag": "",
[2025-10-11 08:17:11]  *** Listing of results directory ***
[2025-10-11 08:17:11] total 413404
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc    557409 Oct 10 15:27 pilot3.tar.gz
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc      5112 Oct 10 15:30 queuedata.json
[2025-10-11 08:17:11] -rwx------ 1 boinc boinc     36292 Oct 10 15:31 runpilot2-wrapper.sh
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc       100 Oct 11 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:17:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 06:11 run_atlas
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc       105 Oct 11 06:11 job.xml
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:11 start_atlas.sh
[2025-10-11 08:17:11] drwxrwx--x 2 boinc boinc      4096 Oct 11 06:11 shared
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc    569681 Oct 11 06:11 input.tar.gz
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc      9157 Oct 11 06:11 init_data.xml
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc 222695659 Oct 11 06:11 EVNT.46676267._001785.pool.root.1
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:11 boinc_setup_complete
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:11 boinc_lockfile
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc      2546 Oct 11 06:11 pandaJob.out
[2025-10-11 08:17:11] -rw------- 1 boinc boinc    975525 Oct 11 06:11 agis_schedconf.cvmfs.json
[2025-10-11 08:17:11] -rw------- 1 boinc boinc   1560580 Oct 11 06:11 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:17:11] drwx------ 5 boinc boinc      4096 Oct 11 06:11 pilot3
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc       530 Oct 11 08:16 boinc_task_state.xml
[2025-10-11 08:17:11] -rw------- 1 boinc boinc 193952201 Oct 11 08:16 HITS.46676269._044094.pool.root.1
[2025-10-11 08:17:11] -rw------- 1 boinc boinc      1025 Oct 11 08:16 memory_monitor_summary.json
[2025-10-11 08:17:11] -rw------- 1 boinc boinc    290209 Oct 11 08:16 log.46676269._044094.job.log.tgz.1
[2025-10-11 08:17:11] -rw------- 1 boinc boinc      7742 Oct 11 08:16 heartbeat.json
[2025-10-11 08:17:11] -rw------- 1 boinc boinc        95 Oct 11 08:17 pilot_heartbeat.json
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc      8192 Oct 11 08:17 boinc_mmap_file
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc        27 Oct 11 08:17 wrapper_checkpoint.txt
[2025-10-11 08:17:11] -rw------- 1 boinc boinc      4903 Oct 11 08:17 pilotlog.txt
[2025-10-11 08:17:11] -rw------- 1 boinc boinc   1090791 Oct 11 08:17 log.46676269._044094.job.log.1
[2025-10-11 08:17:11] -rw------- 1 boinc boinc       357 Oct 11 08:17 output.list
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc       620 Oct 11 08:17 runtime_log
[2025-10-11 08:17:11] -rw------- 1 boinc boinc   1402880 Oct 11 08:17 result.tar.gz
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc      8764 Oct 11 08:17 runtime_log.err
[2025-10-11 08:17:11] -rw------- 1 boinc boinc       644 Oct 11 08:17 rSVNDmt0XR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnGeNDmvJXmpm.diag
[2025-10-11 08:17:11] -rw-r--r-- 1 boinc boinc     20922 Oct 11 08:17 stderr.txt
[2025-10-11 08:17:11] HITS file was successfully produced:
[2025-10-11 08:17:11] -rw------- 1 boinc boinc 193952201 Oct 11 08:16 shared/HITS.pool.root.1
[2025-10-11 08:17:11]  *** Contents of shared directory: ***
[2025-10-11 08:17:11] total 408844
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:11 start_atlas.sh
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc    569681 Oct 11 06:11 input.tar.gz
[2025-10-11 08:17:11] -rw-r--r-- 2 boinc boinc 222695659 Oct 11 06:11 ATLAS.root_0
[2025-10-11 08:17:11] -rw------- 1 boinc boinc 193952201 Oct 11 08:16 HITS.pool.root.1
[2025-10-11 08:17:11] -rw------- 1 boinc boinc   1402880 Oct 11 08:17 result.tar.gz
08:17:13 (3507744): run_atlas exited; CPU time 28923.281501
08:17:13 (3507744): called boinc_finish(0)

</stderr_txt>
]]>

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