Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:09 (2796149): wrapper (7.7.26015): starting
11:07:09 (2796149): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 11:07:09] Arguments: --nthreads 4
[2025-10-12 11:07:09] Threads: 4
[2025-10-12 11:07:09] Checking for CVMFS
[2025-10-12 11:07:09] No cvmfs_config command found, will try listing directly
[2025-10-12 11:07:09] CVMFS is ok
[2025-10-12 11:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:07:09] Further information can be found at the LHC@home message board.
[2025-10-12 11:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:07:09] Checking for apptainer binary...
[2025-10-12 11:07:09] which: no apptainer in ((null))
[2025-10-12 11:07:09] apptainer is not installed, using version from CVMFS
[2025-10-12 11:07:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:07:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-12 11:07:09] apptainer works
[2025-10-12 11:07:09] Set ATHENA_PROC_NUMBER=4
[2025-10-12 11:07:09] Set ATHENA_CORE_NUMBER=4
[2025-10-12 11:07:09] Starting ATLAS job with PandaID=6837962103
[2025-10-12 11:07:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:46:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:46:39] 2025-10-12 11:45:09,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:46:39] 2025-10-12 11:45:09,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:46:39] 2025-10-12 11:45:09,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:46:39] 2025-10-12 11:45:09,355 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:46:39] 2025-10-12 11:45:09,355 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,356 | INFO     | sum of deviations: 13030573804.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,356 | INFO     | mean x: 1760264775.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,356 | INFO     | mean y: 2288333.5483870967
[2025-10-12 13:46:39] 2025-10-12 11:45:09,356 | INFO     | -- intersect: -19862598593.742626
[2025-10-12 13:46:39] 2025-10-12 11:45:09,357 | INFO     | intersect: -19862598593.742626
[2025-10-12 13:46:39] 2025-10-12 11:45:09,357 | INFO     | chi2: 1.902696219760803
[2025-10-12 13:46:39] 2025-10-12 11:45:09,357 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,358 | INFO     | sum of deviations: 21103456421.999996
[2025-10-12 13:46:39] 2025-10-12 11:45:09,358 | INFO     | mean x: 1760264622.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,358 | INFO     | mean y: 2299384.986666667
[2025-10-12 13:46:39] 2025-10-12 11:45:09,358 | INFO     | -- intersect: -35495273031.46439
[2025-10-12 13:46:39] 2025-10-12 11:45:09,359 | INFO     | intersect: -35495273031.46439
[2025-10-12 13:46:39] 2025-10-12 11:45:09,359 | INFO     | chi2: 1.2284135619297358
[2025-10-12 13:46:39] 2025-10-12 11:45:09,359 | INFO     | current chi2=1.2284135619297358 (change=35.438271797052 %)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,359 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,360 | INFO     | sum of deviations: 20088318456.000004
[2025-10-12 13:46:39] 2025-10-12 11:45:09,360 | INFO     | mean x: 1760264470.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,360 | INFO     | mean y: 2297854.724137931
[2025-10-12 13:46:39] 2025-10-12 11:45:09,360 | INFO     | -- intersect: -37405292491.61291
[2025-10-12 13:46:39] 2025-10-12 11:45:09,360 | INFO     | intersect: -37405292491.61291
[2025-10-12 13:46:39] 2025-10-12 11:45:09,361 | INFO     | chi2: 1.2293886271582286
[2025-10-12 13:46:39] 2025-10-12 11:45:09,361 | INFO     | current chi2=1.2293886271582286 (change=-0.07937597391557863 %)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,361 | INFO     | right removable region: 144
[2025-10-12 13:46:39] 2025-10-12 11:45:09,361 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,362 | INFO     | sum of deviations: -5209332076.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,362 | INFO     | mean x: 1760264927.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,362 | INFO     | mean y: 2313600.3
[2025-10-12 13:46:39] 2025-10-12 11:45:09,362 | INFO     | -- intersect: 8764796435.806902
[2025-10-12 13:46:39] 2025-10-12 11:45:09,362 | INFO     | intersect: 8764796435.806902
[2025-10-12 13:46:39] 2025-10-12 11:45:09,363 | INFO     | chi2: 0.6941301630232931
[2025-10-12 13:46:39] 2025-10-12 11:45:09,363 | INFO     | current chi2=0.6941301630232931 (change=63.518602927031864 %)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,363 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | sum of deviations: -5871357177.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | mean x: 1760265080.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | mean y: 2314592.4344827584
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | -- intersect: 10935703598.925364
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | intersect: 10935703598.925364
[2025-10-12 13:46:39] 2025-10-12 11:45:09,364 | INFO     | chi2: 0.6934307752690573
[2025-10-12 13:46:39] 2025-10-12 11:45:09,365 | INFO     | current chi2=0.6934307752690573 (change=0.10075743592378172 %)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,365 | INFO     | left removable region: 20
[2025-10-12 13:46:39] 2025-10-12 11:45:09,365 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | sum of deviations: 1041874662.5000001
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | mean x: 1760265049.5
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | mean y: 2328232.314516129
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | -- intersect: -3099932594.685592
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | intersect: -3099932594.685592
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | chi2: 0.00027260459381392915
[2025-10-12 13:46:39] 2025-10-12 11:45:09,366 | INFO     | -- intersect: -3099932594.685592
[2025-10-12 13:46:39] 2025-10-12 11:45:09,367 | INFO     | current memory leak: 1.76 B/s (using 124 data points, chi2=0.00)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,367 | INFO     | could have reported an average CPU frequency of 2716 MHz (9 samples)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,367 | INFO     | ..............................
[2025-10-12 13:46:39] 2025-10-12 11:45:09,367 | INFO     | . Timing measurements:
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . get job = 0 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . initial setup = 1 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . payload setup = 8 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . stage-in = 0 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . payload execution = 9425 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . stage-out = 0 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | . log creation = 0 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,368 | INFO     | ..............................
[2025-10-12 13:46:39] 2025-10-12 11:45:09,474 | INFO     | 
[2025-10-12 13:46:39] 2025-10-12 11:45:09,474 | INFO     | job summary report
[2025-10-12 13:46:39] 2025-10-12 11:45:09,474 | INFO     | --------------------------------------------------
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | PanDA job id: 6837962103
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | task id: 46676269
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | errors: (none)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | pilot state: finished 
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | transexitcode: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | exeerrorcode: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | exeerrordiag: 
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | exitcode: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | exitmsg: OK
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | cpuconsumptiontime: 36232 s
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | nevents: 400
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | neventsw: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,475 | INFO     | pid: 2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | pgrp: 2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | corecount: 4
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | event service: False
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | sizes: {0: 2348869, 6: 2349131, 11: 2349159, 9438: 2377999, 9439: 2387077, 9448: 2387279}
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | --------------------------------------------------
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | 
[2025-10-12 13:46:39] 2025-10-12 11:45:09,476 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-12 13:46:39] 2025-10-12 11:45:09,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:46:39] 2025-10-12 11:45:09,507 | INFO     | job 6837962103 has completed (purged errors)
[2025-10-12 13:46:39] 2025-10-12 11:45:09,508 | INFO     | overall cleanup function is called
[2025-10-12 13:46:39] 2025-10-12 11:45:10,516 | INFO     | --- collectZombieJob: --- 10, [2920261]
[2025-10-12 13:46:39] 2025-10-12 11:45:10,516 | INFO     | zombie collector waiting for pid 2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:10,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:46:39] 2025-10-12 11:45:10,517 | INFO     | collected zombie processes
[2025-10-12 13:46:39] 2025-10-12 11:45:10,517 | INFO     | will attempt to kill all subprocesses of pid=2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:11,331 | INFO     | process IDs to be killed: [2920261] (in reverse order)
[2025-10-12 13:46:39] 2025-10-12 11:45:11,595 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:46:39] 2025-10-12 11:45:11,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:46:39] 2025-10-12 11:45:11,630 | INFO     | did not find any defunct processes belonging to 2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:11,660 | INFO     | did not find any defunct processes belonging to 2920261
[2025-10-12 13:46:39] 2025-10-12 11:45:11,661 | INFO     | ready for new job
[2025-10-12 13:46:39] 2025-10-12 11:45:11,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:46:39] 2025-10-12 11:45:11,663 | INFO     | ***************************************
[2025-10-12 13:46:39] 2025-10-12 11:45:11,663 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:46:39] 2025-10-12 11:45:11,663 | INFO     | ***************************************
[2025-10-12 13:46:39] 2025-10-12 11:45:11,663 | INFO     | 
[2025-10-12 13:46:39] 2025-10-12 11:45:11,672 | INFO     | architecture information:
[2025-10-12 13:46:39] 2025-10-12 11:45:11,672 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:46:39] 2025-10-12 11:45:11,695 | INFO     | cat /etc/os-release:
[2025-10-12 13:46:39] NAME="CentOS Linux"
[2025-10-12 13:46:39] VERSION="7 (Core)"
[2025-10-12 13:46:39] ID="centos"
[2025-10-12 13:46:39] ID_LIKE="rhel fedora"
[2025-10-12 13:46:39] VERSION_ID="7"
[2025-10-12 13:46:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:46:39] ANSI_COLOR="0;31"
[2025-10-12 13:46:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:46:39] HOME_URL="https://www.centos.org/"
[2025-10-12 13:46:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:46:39] 
[2025-10-12 13:46:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:46:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:46:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:46:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:46:39] 
[2025-10-12 13:46:39] 2025-10-12 11:45:11,695 | INFO     | ***************************************
[2025-10-12 13:46:39] 2025-10-12 11:45:12,197 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-12 13:46:39] 2025-10-12 11:45:12,220 | INFO     | sufficient remaining disk space (3335692222464 B)
[2025-10-12 13:46:39] 2025-10-12 11:45:12,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:46:39] 2025-10-12 11:45:12,221 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:46:39] 2025-10-12 11:45:12,221 | INFO     | update_server=False
[2025-10-12 13:46:39] 2025-10-12 11:45:12,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:46:39] 2025-10-12 11:45:12,323 | INFO     | all payload control threads have been joined
[2025-10-12 13:46:39] 2025-10-12 11:45:12,416 | INFO     | all data control threads have been joined
[2025-10-12 13:46:39] 2025-10-12 11:45:12,787 | INFO     | all job control threads have been joined
[2025-10-12 13:46:39] 2025-10-12 11:45:13,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:46:39] 2025-10-12 11:45:13,224 | INFO     | aborting loop
[2025-10-12 13:46:39] 2025-10-12 11:45:13,228 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,232 | INFO     | [job] validate thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,328 | INFO     | [payload] control thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,340 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,421 | INFO     | [data] control thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:46:39] 2025-10-12 11:45:13,525 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,793 | INFO     | [job] control thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,835 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:13,938 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:14,086 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:14,229 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:14,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:14,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:46:39] 2025-10-12 11:45:14,679 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:15,489 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:15,501 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:15,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:46:39] 2025-10-12 11:45:19,600 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:46:39] 2025-10-12 11:45:39,126 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:46:39] 2025-10-12 11:45:40,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22705802200896)>', '<ExcThread(monitor, started 22705562679040)>']
[2025-10-12 13:46:39] 2025-10-12 11:45:42,318 | INFO     | PID=2828672 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:46:39] 2025-10-12 11:45:42,318 | INFO     | .. there are 11 such processes running
[2025-10-12 13:46:39] 2025-10-12 11:45:42,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:46:39] 2025-10-12 11:45:42,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:46:39] 2025-10-12 11:45:42,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:46:39] 2025-10-12 11:45:42,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:46:39] 2025-10-12 11:45:42,323 | INFO     | [monitor] control thread has ended
[2025-10-12 13:46:39] 2025-10-12 11:45:45,143 | INFO     | all workflow threads have been joined
[2025-10-12 13:46:39] 2025-10-12 11:45:45,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:46:39] 2025-10-12 11:45:45,144 | INFO     | traces error code: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:45,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:46:39] 2025-10-12 11:45:45,341 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:46:39] 2025-10-12 11:45:45,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:46:39] 2025-10-12 11:45:45,349 [wrapper] pilotpid: 2828672
[2025-10-12 13:46:39] 2025-10-12 11:45:45,353 [wrapper] Pilot exit status: 0
[2025-10-12 13:46:39] 2025-10-12 11:45:45,370 [wrapper] pandaids: 6837962103
[2025-10-12 13:46:39] 2025-10-12 11:45:45,547 [wrapper] cleanup supervisor_pilot 3223497 2828673
[2025-10-12 13:46:39] 2025-10-12 11:45:45,551 [wrapper] Test setup, not cleaning
[2025-10-12 13:46:39] 2025-10-12 11:45:45,555 [wrapper] apfmon messages muted
[2025-10-12 13:46:39] 2025-10-12 11:45:45,559 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:46:39] 2025-10-12 11:45:45,564 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:46:39]  *** Error codes and diagnostics ***
[2025-10-12 13:46:39]     "exeErrorCode": 0,
[2025-10-12 13:46:39]     "exeErrorDiag": "",
[2025-10-12 13:46:39]     "pilotErrorCode": 0,
[2025-10-12 13:46:39]     "pilotErrorDiag": "",
[2025-10-12 13:46:39]  *** Listing of results directory ***
[2025-10-12 13:46:39] total 407948
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc    557409 Oct 11 04:50 pilot3.tar.gz
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc      5112 Oct 11 04:57 queuedata.json
[2025-10-12 13:46:39] -rwx------ 1 boinc boinc     36292 Oct 11 04:57 runpilot2-wrapper.sh
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:46:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:07 run_atlas
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:07 job.xml
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc 223829568 Oct 12 11:07 EVNT.46676267._002007.pool.root.1
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc      6688 Oct 12 11:07 init_data.xml
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:07 start_atlas.sh
[2025-10-12 13:46:39] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:07 shared
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc    569679 Oct 12 11:07 input.tar.gz
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:07 boinc_lockfile
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:07 pandaJob.out
[2025-10-12 13:46:39] -rw------- 1 boinc boinc    975520 Oct 12 11:07 agis_schedconf.cvmfs.json
[2025-10-12 13:46:39] -rw------- 1 boinc boinc   1560580 Oct 12 11:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:46:39] drwx------ 5 boinc boinc      4096 Oct 12 11:07 pilot3
[2025-10-12 13:46:39] -rw------- 1 boinc boinc 186662152 Oct 12 13:44 HITS.46676269._049812.pool.root.1
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:44 boinc_task_state.xml
[2025-10-12 13:46:39] -rw------- 1 boinc boinc      1033 Oct 12 13:44 memory_monitor_summary.json
[2025-10-12 13:46:39] -rw------- 1 boinc boinc    343802 Oct 12 13:45 log.46676269._049812.job.log.tgz.1
[2025-10-12 13:46:39] -rw------- 1 boinc boinc      7787 Oct 12 13:45 heartbeat.json
[2025-10-12 13:46:39] -rw------- 1 boinc boinc        95 Oct 12 13:45 pilot_heartbeat.json
[2025-10-12 13:46:39] -rw------- 1 boinc boinc      4836 Oct 12 13:45 pilotlog.txt
[2025-10-12 13:46:39] -rw------- 1 boinc boinc   1330906 Oct 12 13:45 log.46676269._049812.job.log.1
[2025-10-12 13:46:39] -rw------- 1 boinc boinc       357 Oct 12 13:45 output.list
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:45 runtime_log
[2025-10-12 13:46:39] -rw------- 1 boinc boinc   1689600 Oct 12 13:45 result.tar.gz
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc      9084 Oct 12 13:45 runtime_log.err
[2025-10-12 13:46:39] -rw------- 1 boinc boinc       663 Oct 12 13:45 n51NDmkyeR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEFfNDmnq7RWm.diag
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:46 wrapper_checkpoint.txt
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:46 boinc_mmap_file
[2025-10-12 13:46:39] -rw-r--r-- 1 boinc boinc     20641 Oct 12 13:46 stderr.txt
[2025-10-12 13:46:39] HITS file was successfully produced:
[2025-10-12 13:46:39] -rw------- 1 boinc boinc 186662152 Oct 12 13:44 shared/HITS.pool.root.1
[2025-10-12 13:46:39]  *** Contents of shared directory: ***
[2025-10-12 13:46:39] total 403108
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc 223829568 Oct 12 11:07 ATLAS.root_0
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:07 start_atlas.sh
[2025-10-12 13:46:39] -rw-r--r-- 2 boinc boinc    569679 Oct 12 11:07 input.tar.gz
[2025-10-12 13:46:39] -rw------- 1 boinc boinc 186662152 Oct 12 13:44 HITS.pool.root.1
[2025-10-12 13:46:39] -rw------- 1 boinc boinc   1689600 Oct 12 13:45 result.tar.gz
13:46:40 (2796149): run_atlas exited; CPU time 36829.617670
13:46:40 (2796149): called boinc_finish(0)

</stderr_txt>
]]>

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