Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:58:32 (1459280): wrapper (7.7.26015): starting
11:58:32 (1459280): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 11:58:32] Arguments: --nthreads 3
[2025-10-12 11:58:32] Threads: 3
[2025-10-12 11:58:32] Checking for CVMFS
[2025-10-12 11:58:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:58:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:58:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:58:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:58:35] 2.9.2.0 1459476 0 30048 151615 3 1 4544461 36864001 0 130560 0 0 0.000 1291 4610 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 11:58:35] CVMFS is ok
[2025-10-12 11:58:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:58:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:58:35] Further information can be found at the LHC@home message board.
[2025-10-12 11:58:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:58:35] Checking for apptainer binary...
[2025-10-12 11:58:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:58:35] Running /usr/bin/apptainer --version
[2025-10-12 11:58:35] apptainer version 1.4.1-1.1
[2025-10-12 11:58:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:58:35] thA363a
[2025-10-12 11:58:35] apptainer works
[2025-10-12 11:58:35] Set ATHENA_PROC_NUMBER=3
[2025-10-12 11:58:35] Set ATHENA_CORE_NUMBER=3
[2025-10-12 11:58:35] Starting ATLAS job with PandaID=6838117518
[2025-10-12 11:58:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:35:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:35:30]  scope=mc23_13p6TeV
[2025-10-12 15:35:30]  status=None
[2025-10-12 15:35:30]  status_code=0
[2025-10-12 15:35:30]  storage_token=
[2025-10-12 15:35:30]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838117518/log.46676269._052111.job.log.tgz.1
[2025-10-12 15:35:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/9d/log.46676269._052111.job.log.tgz.1
[2025-10-12 15:35:30]  workdir=None
[2025-10-12 15:35:30] ]
[2025-10-12 15:35:30] 2025-10-12 11:26:19,352 | INFO     | transferring file log.46676269._052111.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838117518/log.46676269._052111.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 15:35:30] 2025-10-12 11:26:19,352 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838117518/log.46676269._052111.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0521
[2025-10-12 15:35:30] 2025-10-12 11:26:19,365 | INFO     | adding to output.list: log.46676269._052111.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/9d/log.46676269._052111.job.log.tg
[2025-10-12 15:35:30] 2025-10-12 11:26:19,365 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:35:30] 2025-10-12 11:26:19,365 | INFO     | summary of transferred files:
[2025-10-12 15:35:30] 2025-10-12 11:26:19,365 | INFO     |  -- lfn=log.46676269._052111.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:35:30] 2025-10-12 11:26:19,365 | INFO     | stage-out finished correctly
[2025-10-12 15:35:30] 2025-10-12 11:26:20,670 | INFO     | monitor loop #404: job 0:6838117518 is in state 'finished'
[2025-10-12 15:35:30] 2025-10-12 11:26:20,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:35:30] 2025-10-12 11:26:20,889 | INFO     | time since job start (5256s) is within the limit (172800.0s)
[2025-10-12 15:35:30] 2025-10-12 11:26:21,120 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:35:30] 2025-10-12 11:26:21,149 | INFO     | job 6838117518 has state=finished
[2025-10-12 15:35:30] 2025-10-12 11:26:21,149 | INFO     | preparing for final server update for job 6838117518 in state='finished'
[2025-10-12 15:35:30] 2025-10-12 11:26:21,149 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:35:30] 2025-10-12 11:26:21,149 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:35:30] 2025-10-12 11:26:21,150 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:35:30] 2025-10-12 11:26:21,150 | INFO     | job 6838117518 has finished - writing final server update
[2025-10-12 15:35:30] 2025-10-12 11:26:21,150 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:35:30] 2025-10-12 11:26:21,150 | INFO     | executing command: lscpu
[2025-10-12 15:35:30] 2025-10-12 11:26:21,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:35:30] 2025-10-12 11:26:22,895 | INFO     | time since job start (5258s) is within the limit (172800.0s)
[2025-10-12 15:35:30] 2025-10-12 11:26:23,173 | INFO     | monitor loop #405: job 0:6838117518 is in state 'finished'
[2025-10-12 15:35:30] 2025-10-12 11:26:23,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:35:30] 2025-10-12 11:26:24,900 | INFO     | time since job start (5260s) is within the limit (172800.0s)
[2025-10-12 15:35:30] 2025-10-12 11:26:25,676 | INFO     | monitor loop #406: job 0:6838117518 is in state 'finished'
[2025-10-12 15:35:30] 2025-10-12 11:26:25,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,143 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:35:30] 2025-10-12 11:26:26,144 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3741.678
[2025-10-12 15:35:30] 2025-10-12 11:26:26,145 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838117518/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,146 | INFO     | extracted standard info from prmon json
[2025-10-12 15:35:30] 2025-10-12 11:26:26,146 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:35:30] 2025-10-12 11:26:26,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:35:30] 2025-10-12 11:26:26,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:35:30] 2025-10-12 11:26:26,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | sum of deviations: -2192941399.0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | mean x: 1760265828.0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | mean y: 2339855.569620253
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | -- intersect: 25255467826.229927
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | intersect: 25255467826.229927
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | chi2: 0.06484309131574842
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | -- intersect: 25255467826.229927
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | current memory leak: -14.35 B/s (using 79 data points, chi2=0.06)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | could have reported an average CPU frequency of 4016 MHz (6 samples)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,147 | INFO     | ..............................
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . Timing measurements:
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . get job = 0 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . initial setup = 1 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . payload setup = 3 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . stage-in = 0 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . payload execution = 5234 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . stage-out = 0 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | . log creation = 0 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,148 | INFO     | ..............................
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | 
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | job summary report
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | --------------------------------------------------
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | PanDA job id: 6838117518
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | task id: 46676269
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | errors: (none)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | pilot state: finished 
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | transexitcode: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | exeerrorcode: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | exeerrordiag: 
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | exitcode: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | exitmsg: OK
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | cpuconsumptiontime: 14987 s
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | nevents: 400
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | neventsw: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | pid: 1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:26,270 | INFO     | pgrp: 1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | corecount: 3
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | event service: False
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | sizes: {0: 2348859, 3: 2349121, 11: 2349149, 5241: 2375753, 5242: 2384812, 5244: 2384812, 5249: 2385134}
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | --------------------------------------------------
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | 
[2025-10-12 15:35:30] 2025-10-12 11:26:26,271 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | job 6838117518 has completed (purged errors)
[2025-10-12 15:35:30] 2025-10-12 11:26:26,284 | INFO     | overall cleanup function is called
[2025-10-12 15:35:30] 2025-10-12 11:26:27,291 | INFO     | --- collectZombieJob: --- 10, [1470099]
[2025-10-12 15:35:30] 2025-10-12 11:26:27,291 | INFO     | zombie collector waiting for pid 1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:27,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:35:30] 2025-10-12 11:26:27,291 | INFO     | collected zombie processes
[2025-10-12 15:35:30] 2025-10-12 11:26:27,291 | INFO     | will attempt to kill all subprocesses of pid=1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:27,342 | INFO     | process IDs to be killed: [1470099] (in reverse order)
[2025-10-12 15:35:30] 2025-10-12 11:26:27,370 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:35:30] 2025-10-12 11:26:27,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:35:30] 2025-10-12 11:26:27,372 | INFO     | did not find any defunct processes belonging to 1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:27,373 | INFO     | did not find any defunct processes belonging to 1470099
[2025-10-12 15:35:30] 2025-10-12 11:26:27,373 | INFO     | ready for new job
[2025-10-12 15:35:30] 2025-10-12 11:26:27,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:35:30] 2025-10-12 11:26:27,374 | INFO     | ***************************************
[2025-10-12 15:35:30] 2025-10-12 11:26:27,374 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:35:30] 2025-10-12 11:26:27,374 | INFO     | ***************************************
[2025-10-12 15:35:30] 2025-10-12 11:26:27,374 | INFO     | 
[2025-10-12 15:35:30] 2025-10-12 11:26:27,375 | INFO     | architecture information:
[2025-10-12 15:35:30] 2025-10-12 11:26:27,375 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:35:30] 2025-10-12 11:26:27,384 | INFO     | cat /etc/os-release:
[2025-10-12 15:35:30] NAME="CentOS Linux"
[2025-10-12 15:35:30] VERSION="7 (Core)"
[2025-10-12 15:35:30] ID="centos"
[2025-10-12 15:35:30] ID_LIKE="rhel fedora"
[2025-10-12 15:35:30] VERSION_ID="7"
[2025-10-12 15:35:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:35:30] ANSI_COLOR="0;31"
[2025-10-12 15:35:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:35:30] HOME_URL="https://www.centos.org/"
[2025-10-12 15:35:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:35:30] 
[2025-10-12 15:35:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:35:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:35:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:35:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:35:30] 
[2025-10-12 15:35:30] 2025-10-12 11:26:27,384 | INFO     | ***************************************
[2025-10-12 15:35:30] 2025-10-12 11:26:27,887 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | INFO     | sufficient remaining disk space (254905679872 B)
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | INFO     | update_server=False
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:30] 2025-10-12 11:26:27,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:35:30] 2025-10-12 11:26:27,918 | INFO     | all data control threads have been joined
[2025-10-12 15:35:30] 2025-10-12 11:26:28,180 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:35:30] 2025-10-12 11:26:28,180 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:35:30] 2025-10-12 11:26:28,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:30] 2025-10-12 11:26:28,180 | INFO     | will abort loop
[2025-10-12 15:35:30] 2025-10-12 11:26:28,734 | INFO     | all job control threads have been joined
[2025-10-12 15:35:30] 2025-10-12 11:26:28,823 | INFO     | all payload control threads have been joined
[2025-10-12 15:35:30] 2025-10-12 11:26:28,903 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:28,903 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:28,923 | INFO     | [data] control thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:28,948 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,171 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,186 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,703 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,740 | INFO     | [job] control thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,829 | INFO     | [payload] control thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,864 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:29,905 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:30,100 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:30,299 | INFO     | [job] validate thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:30,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:31,905 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:38,951 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:35:30] 2025-10-12 11:26:39,957 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:35:30] 2025-10-12 11:26:50,679 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:35:30] 2025-10-12 11:26:51,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557150631744)>', '<ExcThread(monitor, started 140556797720320)>']
[2025-10-12 15:35:30] 2025-10-12 11:26:56,101 | INFO     | all workflow threads have been joined
[2025-10-12 15:35:30] 2025-10-12 11:26:56,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:35:30] 2025-10-12 11:26:56,102 | INFO     | traces error code: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:56,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:35:30] 2025-10-12 11:26:58,009 | INFO     | PID=1463586 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:35:30] 2025-10-12 11:26:58,010 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:35:30] 2025-10-12 11:26:58,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:35:30] 2025-10-12 11:26:58,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:35:30] 2025-10-12 11:26:58,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:35:30] 2025-10-12 11:26:58,010 | INFO     | [monitor] control thread has ended
[2025-10-12 15:35:30] 2025-10-12 11:26:58,062 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:35:30] 2025-10-12 11:26:58,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:35:30] 2025-10-12 11:26:58,067 [wrapper] pilotpid: 1463586
[2025-10-12 15:35:30] 2025-10-12 11:26:58,070 [wrapper] Pilot exit status: 0
[2025-10-12 15:35:30] 2025-10-12 11:26:58,077 [wrapper] pandaids: 6838117518
[2025-10-12 15:35:30] 2025-10-12 11:26:58,096 [wrapper] cleanup supervisor_pilot 1508319 1463587
[2025-10-12 15:35:30] 2025-10-12 11:26:58,098 [wrapper] Test setup, not cleaning
[2025-10-12 15:35:30] 2025-10-12 11:26:58,101 [wrapper] apfmon messages muted
[2025-10-12 15:35:30] 2025-10-12 11:26:58,103 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:35:30] 2025-10-12 11:26:58,105 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:35:30]  *** Error codes and diagnostics ***
[2025-10-12 15:35:30]     "exeErrorCode": 0,
[2025-10-12 15:35:30]     "exeErrorDiag": "",
[2025-10-12 15:35:30]     "pilotErrorCode": 0,
[2025-10-12 15:35:30]     "pilotErrorDiag": "",
[2025-10-12 15:35:30]  *** Listing of results directory ***
[2025-10-12 15:35:30] total 407472
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:36 queuedata.json
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:36 pilot3.tar.gz
[2025-10-12 15:35:30] -rwx------ 1 boinc boinc     36292 Oct 11 07:37 runpilot2-wrapper.sh
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:35:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:58 run_atlas
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:58 job.xml
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc 219370571 Oct 12 11:58 EVNT.46676267._002094.pool.root.1
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:58 input.tar.gz
[2025-10-12 15:35:30] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:58 shared
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:58 start_atlas.sh
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:58 boinc_setup_complete
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc      6437 Oct 12 11:58 init_data.xml
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:58 boinc_lockfile
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc      2549 Oct 12 11:58 pandaJob.out
[2025-10-12 15:35:30] -rw------- 1 boinc boinc    975536 Oct 12 11:58 agis_schedconf.cvmfs.json
[2025-10-12 15:35:30] -rw------- 1 boinc boinc   1560580 Oct 12 11:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:35:30] drwx------ 5 boinc boinc      4096 Oct 12 11:58 pilot3
[2025-10-12 15:35:30] -rw------- 1 boinc boinc 191907276 Oct 12 13:26 HITS.46676269._052111.pool.root.1
[2025-10-12 15:35:30] -rw------- 1 boinc boinc        95 Oct 12 13:26 pilot_heartbeat.json
[2025-10-12 15:35:30] -rw------- 1 boinc boinc      1027 Oct 12 13:26 memory_monitor_summary.json
[2025-10-12 15:35:30] -rw------- 1 boinc boinc    266160 Oct 12 13:26 log.46676269._052111.job.log.tgz.1
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc       528 Oct 12 13:26 boinc_task_state.xml
[2025-10-12 15:35:30] -rw------- 1 boinc boinc      7769 Oct 12 13:26 heartbeat.json
[2025-10-12 15:35:30] -rw------- 1 boinc boinc       747 Oct 12 13:26 pilotlog.txt
[2025-10-12 15:35:30] -rw------- 1 boinc boinc    767695 Oct 12 13:26 log.46676269._052111.job.log.1
[2025-10-12 15:35:30] -rw------- 1 boinc boinc       357 Oct 12 13:26 output.list
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:26 runtime_log
[2025-10-12 15:35:30] -rw------- 1 boinc boinc   1054720 Oct 12 13:26 result.tar.gz
[2025-10-12 15:35:30] -rw------- 1 boinc boinc       659 Oct 12 13:26 tN7KDmlThR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0JRMDmZ0RU9n.diag
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc      8782 Oct 12 13:26 runtime_log.err
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:35 boinc_mmap_file
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc        26 Oct 12 15:35 wrapper_checkpoint.txt
[2025-10-12 15:35:30] -rw-r--r-- 1 boinc boinc     21876 Oct 12 15:35 stderr.txt
[2025-10-12 15:35:30] HITS file was successfully produced:
[2025-10-12 15:35:30] -rw------- 1 boinc boinc 191907276 Oct 12 13:26 shared/HITS.pool.root.1
[2025-10-12 15:35:30]  *** Contents of shared directory: ***
[2025-10-12 15:35:30] total 403260
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc 219370571 Oct 12 11:58 ATLAS.root_0
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:58 input.tar.gz
[2025-10-12 15:35:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:58 start_atlas.sh
[2025-10-12 15:35:30] -rw------- 1 boinc boinc 191907276 Oct 12 13:26 HITS.pool.root.1
[2025-10-12 15:35:30] -rw------- 1 boinc boinc   1054720 Oct 12 13:26 result.tar.gz
15:35:32 (1459280): run_atlas exited; CPU time 15004.540279
15:35:32 (1459280): called boinc_finish(0)

</stderr_txt>
]]>

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