Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:33 (504893): wrapper (7.7.26015): starting
01:50:33 (504893): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 01:50:33] Arguments: --nthreads 3
[2025-10-13 01:50:33] Threads: 3
[2025-10-13 01:50:33] Checking for CVMFS
[2025-10-13 01:50:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:51:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:51:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:51:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:51:26] 2.11.5.0 505111 0 30920 151627 3 1 13561795 15728640 0 130560 0 0 0.000 1293 59 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 01:51:26] CVMFS is ok
[2025-10-13 01:51:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:51:26] Checking for apptainer binary...
[2025-10-13 01:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:51:26] Running /usr/bin/apptainer --version
[2025-10-13 01:51:26] apptainer version 1.3.4-1.el9
[2025-10-13 01:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:51:26] testio003
[2025-10-13 01:51:26] apptainer works
[2025-10-13 01:51:26] Set ATHENA_PROC_NUMBER=3
[2025-10-13 01:51:26] Set ATHENA_CORE_NUMBER=3
[2025-10-13 01:51:26] Starting ATLAS job with PandaID=6837961107
[2025-10-13 01:51:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:54:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:54:11] 2025-10-12 18:53:10,081 | INFO     | monitor loop #556: job 0:6837961107 is in state 'finished'
[2025-10-13 03:54:11] 2025-10-12 18:53:10,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:54:11] 2025-10-12 18:53:11,080 | INFO     | time since job start (7219s) is within the limit (172800.0s)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,259 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:54:11] 2025-10-12 18:53:12,260 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3498.4210000000003
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837961107/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | INFO     | extracted standard info from prmon json
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:54:11] 2025-10-12 18:53:12,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:54:11] 2025-10-12 18:53:12,262 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:54:11] 2025-10-12 18:53:12,262 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | sum of deviations: 5933614691.999997
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | mean x: 1760291533.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | mean y: 2342482.4444444445
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | -- intersect: -21030581834.928593
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | intersect: -21030581834.928593
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | chi2: 2.0344808265458654
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | sum of deviations: 5748544748.5
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | mean x: 1760291380.5
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | mean y: 2342019.3660714286
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | -- intersect: -23227411936.62663
[2025-10-13 03:54:11] 2025-10-12 18:53:12,263 | INFO     | intersect: -23227411936.62663
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | chi2: 2.0380136994170894
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | current chi2=2.0380136994170894 (change=-0.17364984840983522 %)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | right removable region: 111
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | sum of deviations: -14550963027.5
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | mean x: 1760291685.5
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | mean y: 2393056.598214286
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | -- intersect: 58802552802.5216
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | intersect: 58802552802.5216
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | chi2: 0.2106364752442903
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | current chi2=0.2106364752442903 (change=89.64667189309874 %)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,264 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | sum of deviations: -9429891485.000002
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | mean x: 1760291838.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | mean y: 2378999.8224299066
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | -- intersect: 43704201419.30648
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | intersect: 43704201419.30648
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | chi2: 0.1756840412782267
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | current chi2=0.1756840412782267 (change=16.59372334517407 %)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | left removable region: 20
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | sum of square deviations: 233641590.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | sum of deviations: 923375117.0000001
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | mean x: 1760291960.0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | mean y: 2345863.3626373624
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | -- intersect: -6954505416.921662
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | intersect: -6954505416.921662
[2025-10-13 03:54:11] 2025-10-12 18:53:12,265 | INFO     | chi2: 0.0010140573617670877
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | -- intersect: -6954505416.921662
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | current memory leak: 3.95 B/s (using 91 data points, chi2=0.00)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | could have reported an average CPU frequency of 3563 MHz (7 samples)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | ..............................
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . Timing measurements:
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . get job = 0 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . initial setup = 4 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . payload setup = 5 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . stage-in = 0 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . payload execution = 7116 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . stage-out = 0 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | . log creation = 0 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,266 | INFO     | ..............................
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | 
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | job summary report
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | --------------------------------------------------
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | PanDA job id: 6837961107
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | task id: 46676269
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | errors: (none)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | pilot state: finished 
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | transexitcode: 0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | exeerrorcode: 0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | exeerrordiag: 
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | exitcode: 0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | exitmsg: OK
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | cpuconsumptiontime: 20186 s
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | nevents: 400
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | neventsw: 0
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | pid: 515710
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | pgrp: 515710
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | corecount: 3
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | event service: False
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 7125: 2376489, 7127: 2385487, 7130: 2385543, 7207: 2385865}
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | --------------------------------------------------
[2025-10-13 03:54:11] 2025-10-12 18:53:12,303 | INFO     | 
[2025-10-13 03:54:11] 2025-10-12 18:53:12,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | job 6837961107 has completed (purged errors)
[2025-10-13 03:54:11] 2025-10-12 18:53:12,314 | INFO     | overall cleanup function is called
[2025-10-13 03:54:11] 2025-10-12 18:53:13,320 | INFO     | --- collectZombieJob: --- 10, [515710]
[2025-10-13 03:54:11] 2025-10-12 18:53:13,320 | INFO     | zombie collector waiting for pid 515710
[2025-10-13 03:54:11] 2025-10-12 18:53:13,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:54:11] 2025-10-12 18:53:13,320 | INFO     | collected zombie processes
[2025-10-13 03:54:11] 2025-10-12 18:53:13,320 | INFO     | will attempt to kill all subprocesses of pid=515710
[2025-10-13 03:54:11] 2025-10-12 18:53:13,358 | INFO     | process IDs to be killed: [515710] (in reverse order)
[2025-10-13 03:54:11] 2025-10-12 18:53:13,379 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:54:11] 2025-10-12 18:53:13,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:54:11] 2025-10-12 18:53:13,380 | INFO     | did not find any defunct processes belonging to 515710
[2025-10-13 03:54:11] 2025-10-12 18:53:13,381 | INFO     | did not find any defunct processes belonging to 515710
[2025-10-13 03:54:11] 2025-10-12 18:53:13,381 | INFO     | ready for new job
[2025-10-13 03:54:11] 2025-10-12 18:53:13,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:54:11] 2025-10-12 18:53:13,382 | INFO     | ***************************************
[2025-10-13 03:54:11] 2025-10-12 18:53:13,382 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:54:11] 2025-10-12 18:53:13,382 | INFO     | ***************************************
[2025-10-13 03:54:11] 2025-10-12 18:53:13,383 | INFO     | 
[2025-10-13 03:54:11] 2025-10-12 18:53:13,394 | INFO     | architecture information:
[2025-10-13 03:54:11] 2025-10-12 18:53:13,395 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:54:11] 2025-10-12 18:53:13,403 | INFO     | cat /etc/os-release:
[2025-10-13 03:54:11] NAME="CentOS Linux"
[2025-10-13 03:54:11] VERSION="7 (Core)"
[2025-10-13 03:54:11] ID="centos"
[2025-10-13 03:54:11] ID_LIKE="rhel fedora"
[2025-10-13 03:54:11] VERSION_ID="7"
[2025-10-13 03:54:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:54:11] ANSI_COLOR="0;31"
[2025-10-13 03:54:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:54:11] HOME_URL="https://www.centos.org/"
[2025-10-13 03:54:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:54:11] 
[2025-10-13 03:54:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:54:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:54:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:54:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:54:11] 
[2025-10-13 03:54:11] 2025-10-12 18:53:13,403 | INFO     | ***************************************
[2025-10-13 03:54:11] 2025-10-12 18:53:13,906 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 03:54:11] 2025-10-12 18:53:13,914 | INFO     | sufficient remaining disk space (40237006848 B)
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | INFO     | update_server=False
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:54:11] 2025-10-12 18:53:13,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:54:11] 2025-10-12 18:53:13,916 | INFO     | aborting loop
[2025-10-13 03:54:11] 2025-10-12 18:53:14,890 | INFO     | all data control threads have been joined
[2025-10-13 03:54:11] 2025-10-12 18:53:14,919 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:14,920 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:14,921 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,046 | INFO     | all payload control threads have been joined
[2025-10-13 03:54:11] 2025-10-12 18:53:15,227 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,462 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,606 | INFO     | all job control threads have been joined
[2025-10-13 03:54:11] 2025-10-12 18:53:15,664 | INFO     | [job] validate thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,751 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,829 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,896 | INFO     | [data] control thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:15,921 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:16,051 | INFO     | [payload] control thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:16,261 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:16,611 | INFO     | [job] control thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:17,921 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:24,541 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:54:11] 2025-10-12 18:53:25,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:54:11] 2025-10-12 18:53:44,191 | INFO     | PID=509173 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:54:11] 2025-10-12 18:53:44,191 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:54:11] 2025-10-12 18:53:44,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:54:11] 2025-10-12 18:53:44,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:54:11] 2025-10-12 18:54:04,031 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:54:11] 2025-10-12 18:54:06,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734853801792)>', '<ExcThread(monitor, started 139733984331520)>']
[2025-10-13 03:54:11] 2025-10-12 18:54:06,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:54:11] 2025-10-12 18:54:06,298 | INFO     | [monitor] control thread has ended
[2025-10-13 03:54:11] 2025-10-12 18:54:11,048 | INFO     | all workflow threads have been joined
[2025-10-13 03:54:11] 2025-10-12 18:54:11,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:54:11] 2025-10-12 18:54:11,049 | INFO     | traces error code: 0
[2025-10-13 03:54:11] 2025-10-12 18:54:11,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:54:11] 2025-10-12 18:54:11,108 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:54:11] 2025-10-12 18:54:11,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:54:11] 2025-10-12 18:54:11,111 [wrapper] pilotpid: 509173
[2025-10-13 03:54:11] 2025-10-12 18:54:11,113 [wrapper] Pilot exit status: 0
[2025-10-13 03:54:11] 2025-10-12 18:54:11,119 [wrapper] pandaids: 6837961107
[2025-10-13 03:54:11] 2025-10-12 18:54:11,133 [wrapper] cleanup supervisor_pilot  531814 509174
[2025-10-13 03:54:11] 2025-10-12 18:54:11,135 [wrapper] Test setup, not cleaning
[2025-10-13 03:54:11] 2025-10-12 18:54:11,137 [wrapper] apfmon messages muted
[2025-10-13 03:54:11] 2025-10-12 18:54:11,138 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:54:11] 2025-10-12 18:54:11,140 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:54:11]  *** Error codes and diagnostics ***
[2025-10-13 03:54:11]     "exeErrorCode": 0,
[2025-10-13 03:54:11]     "exeErrorDiag": "",
[2025-10-13 03:54:11]     "pilotErrorCode": 0,
[2025-10-13 03:54:11]     "pilotErrorDiag": "",
[2025-10-13 03:54:11]  *** Listing of results directory ***
[2025-10-13 03:54:11] total 418524
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc      5112 Oct 11 11:51 queuedata.json
[2025-10-13 03:54:11] -rwx------. 1 boinc boinc     36292 Oct 11 11:52 runpilot2-wrapper.sh
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:54:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:50 run_atlas
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:50 job.xml
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:50 start_atlas.sh
[2025-10-13 03:54:11] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:50 shared
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc    569684 Oct 13 01:50 input.tar.gz
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc      9291 Oct 13 01:50 init_data.xml
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc 219408741 Oct 13 01:50 EVNT.46676267._001999.pool.root.1
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:50 boinc_lockfile
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc      2550 Oct 13 01:51 pandaJob.out
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc    975528 Oct 13 01:52 agis_schedconf.cvmfs.json
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc   1560580 Oct 13 01:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:54:11] drwx------. 5 boinc boinc      4096 Oct 13 01:52 pilot3
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc       529 Oct 13 03:51 boinc_task_state.xml
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc 202682972 Oct 13 03:51 HITS.46676269._049594.pool.root.1
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc      1011 Oct 13 03:51 memory_monitor_summary.json
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc    269941 Oct 13 03:51 log.46676269._049594.job.log.tgz.1
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc      7758 Oct 13 03:53 heartbeat.json
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc        95 Oct 13 03:53 pilot_heartbeat.json
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc      8192 Oct 13 03:53 boinc_mmap_file
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc        27 Oct 13 03:53 wrapper_checkpoint.txt
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc      4819 Oct 13 03:54 pilotlog.txt
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc   1018591 Oct 13 03:54 log.46676269._049594.job.log.1
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc       357 Oct 13 03:54 output.list
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc       620 Oct 13 03:54 runtime_log
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc   1310720 Oct 13 03:54 result.tar.gz
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc       643 Oct 13 03:54 S16KDmiteR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHCfNDmqVitWo.diag
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc      8661 Oct 13 03:54 runtime_log.err
[2025-10-13 03:54:11] -rw-r--r--. 1 boinc boinc     20761 Oct 13 03:54 stderr.txt
[2025-10-13 03:54:11] HITS file was successfully produced:
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc 202682972 Oct 13 03:51 shared/HITS.pool.root.1
[2025-10-13 03:54:11]  *** Contents of shared directory: ***
[2025-10-13 03:54:11] total 414064
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:50 start_atlas.sh
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc    569684 Oct 13 01:50 input.tar.gz
[2025-10-13 03:54:11] -rw-r--r--. 2 boinc boinc 219408741 Oct 13 01:50 ATLAS.root_0
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc 202682972 Oct 13 03:51 HITS.pool.root.1
[2025-10-13 03:54:11] -rw-------. 1 boinc boinc   1310720 Oct 13 03:54 result.tar.gz
03:54:12 (504893): run_atlas exited; CPU time 20218.631582
03:54:12 (504893): called boinc_finish(0)

</stderr_txt>
]]>

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