Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:07:46 (521942): wrapper (7.7.26015): starting
05:07:46 (521942): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 05:07:46] Arguments: --nthreads 8
[2025-10-11 05:07:46] Threads: 8
[2025-10-11 05:07:46] Checking for CVMFS
[2025-10-11 05:07:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:07:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:07:49] 2.13.2.0 6179 4039 129908 151577 3 326 34335623 40960001 20118 16776704 0 11091812 99.925 1537595 31240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 05:07:49] CVMFS is ok
[2025-10-11 05:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:07:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:07:49] Further information can be found at the LHC@home message board.
[2025-10-11 05:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:07:49] Checking for apptainer binary...
[2025-10-11 05:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:07:49] Running /usr/bin/apptainer --version
[2025-10-11 05:07:49] apptainer version 1.4.3-1.el9
[2025-10-11 05:07:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:07:50] c-211-33-2.aglt2.org
[2025-10-11 05:07:50] apptainer works
[2025-10-11 05:07:50] Set ATHENA_PROC_NUMBER=8
[2025-10-11 05:07:50] Set ATHENA_CORE_NUMBER=8
[2025-10-11 05:07:50] Starting ATLAS job with PandaID=6837874299
[2025-10-11 05:07:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:47:44]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:47:44] 2025-10-11 13:46:52,635 | INFO     | monitor loop #984: job 0:6837874299 is in state 'finished'
[2025-10-11 09:47:44] 2025-10-11 13:46:52,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:47:44] 2025-10-11 13:46:53,006 | INFO     | time since job start (16667s) is within the limit (172800.0s)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,228 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 09:47:44] 2025-10-11 13:46:54,266 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2566.470593750001
[2025-10-11 09:47:44] 2025-10-11 13:46:54,332 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837874299/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,333 | INFO     | extracted standard info from prmon json
[2025-10-11 09:47:44] 2025-10-11 13:46:54,333 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:47:44] 2025-10-11 13:46:54,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:47:44] 2025-10-11 13:46:54,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:47:44] 2025-10-11 13:46:54,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:47:44] 2025-10-11 13:46:54,349 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:47:44] 2025-10-11 13:46:54,358 | INFO     | sum of square deviations: 6171209864.19926
[2025-10-11 09:47:44] 2025-10-11 13:46:54,361 | INFO     | sum of deviations: 30119110248.46498
[2025-10-11 09:47:44] 2025-10-11 13:46:54,361 | INFO     | mean x: 1760182136.5756457
[2025-10-11 09:47:44] 2025-10-11 13:46:54,361 | INFO     | mean y: 2495034.3431734317
[2025-10-11 09:47:44] 2025-10-11 13:46:54,361 | INFO     | -- intersect: -8588222344.505755
[2025-10-11 09:47:44] 2025-10-11 13:46:54,361 | INFO     | intersect: -8588222344.505755
[2025-10-11 09:47:44] 2025-10-11 13:46:54,370 | INFO     | chi2: 2.929501253662259
[2025-10-11 09:47:44] 2025-10-11 13:46:54,371 | INFO     | sum of square deviations: 5835897163.342116
[2025-10-11 09:47:44] 2025-10-11 13:46:54,373 | INFO     | sum of deviations: 46719169176.28949
[2025-10-11 09:47:44] 2025-10-11 13:46:54,373 | INFO     | mean x: 1760181984.0789473
[2025-10-11 09:47:44] 2025-10-11 13:46:54,373 | INFO     | mean y: 2502468.462406015
[2025-10-11 09:47:44] 2025-10-11 13:46:54,373 | INFO     | -- intersect: -14088602565.360212
[2025-10-11 09:47:44] 2025-10-11 13:46:54,374 | INFO     | intersect: -14088602565.360212
[2025-10-11 09:47:44] 2025-10-11 13:46:54,382 | INFO     | chi2: 2.2479717711227947
[2025-10-11 09:47:44] 2025-10-11 13:46:54,382 | INFO     | current chi2=2.2479717711227947 (change=23.264351967334488 %)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,383 | INFO     | right removable region: 265
[2025-10-11 09:47:44] 2025-10-11 13:46:54,383 | INFO     | sum of square deviations: 5835851474.180427
[2025-10-11 09:47:44] 2025-10-11 13:46:54,385 | INFO     | sum of deviations: -26739142890.16542
[2025-10-11 09:47:44] 2025-10-11 13:46:54,386 | INFO     | mean x: 1760182289.0827067
[2025-10-11 09:47:44] 2025-10-11 13:46:54,386 | INFO     | mean y: 2520756.007518797
[2025-10-11 09:47:44] 2025-10-11 13:46:54,394 | INFO     | -- intersect: 8067456258.350946
[2025-10-11 09:47:44] 2025-10-11 13:46:54,394 | INFO     | intersect: 8067456258.350946
[2025-10-11 09:47:44] 2025-10-11 13:46:54,395 | INFO     | chi2: 0.902072548515789
[2025-10-11 09:47:44] 2025-10-11 13:46:54,395 | INFO     | current chi2=0.902072548515789 (change=69.20729945453749 %)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,395 | INFO     | sum of square deviations: 5512881879.310323
[2025-10-11 09:47:44] 2025-10-11 13:46:54,397 | INFO     | sum of deviations: -41651643278.86204
[2025-10-11 09:47:44] 2025-10-11 13:46:54,398 | INFO     | mean x: 1760182441.586207
[2025-10-11 09:47:44] 2025-10-11 13:46:54,398 | INFO     | mean y: 2527770.704980843
[2025-10-11 09:47:44] 2025-10-11 13:46:54,406 | INFO     | -- intersect: 13301287433.561562
[2025-10-11 09:47:44] 2025-10-11 13:46:54,406 | INFO     | intersect: 13301287433.561562
[2025-10-11 09:47:44] 2025-10-11 13:46:54,407 | INFO     | chi2: 0.7582391039529397
[2025-10-11 09:47:44] 2025-10-11 13:46:54,407 | INFO     | current chi2=0.7582391039529397 (change=15.944775705624057 %)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,407 | INFO     | left removable region: 20
[2025-10-11 09:47:44] 2025-10-11 13:46:54,408 | INFO     | sum of square deviations: 4559962805.999975
[2025-10-11 09:47:44] 2025-10-11 13:46:54,409 | INFO     | sum of deviations: -23469250959.42856
[2025-10-11 09:47:44] 2025-10-11 13:46:54,410 | INFO     | mean x: 1760182563.5714285
[2025-10-11 09:47:44] 2025-10-11 13:46:54,418 | INFO     | mean y: 2535743.4244897957
[2025-10-11 09:47:44] 2025-10-11 13:46:54,418 | INFO     | -- intersect: 9061856636.242401
[2025-10-11 09:47:44] 2025-10-11 13:46:54,418 | INFO     | intersect: 9061856636.242401
[2025-10-11 09:47:44] 2025-10-11 13:46:54,419 | INFO     | chi2: 0.043134530522636355
[2025-10-11 09:47:44] 2025-10-11 13:46:54,419 | INFO     | -- intersect: 9061856636.242401
[2025-10-11 09:47:44] 2025-10-11 13:46:54,419 | INFO     | current memory leak: -5.15 B/s (using 245 data points, chi2=0.04)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | could have reported an average CPU frequency of 2551 MHz (13 samples)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | ..............................
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | . Timing measurements:
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | . get job = 0 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | . initial setup = 5 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | . payload setup = 45 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,420 | INFO     | . stage-in = 0 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,421 | INFO     | . payload execution = 16503 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,421 | INFO     | . stage-out = 4 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,421 | INFO     | . log creation = 1 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,421 | INFO     | ..............................
[2025-10-11 09:47:44] 2025-10-11 13:46:54,734 | INFO     | 
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | job summary report
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | --------------------------------------------------
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | PanDA job id: 6837874299
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | task id: 46676269
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | errors: (none)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | pilot state: finished 
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | transexitcode: 0
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | exeerrorcode: 0
[2025-10-11 09:47:44] 2025-10-11 13:46:54,735 | INFO     | exeerrordiag: 
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | exitcode: 0
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | exitmsg: OK
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | cpuconsumptiontime: 50296 s
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | nevents: 400
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | neventsw: 0
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | pid: 537570
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | pgrp: 537570
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | corecount: 8
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | event service: False
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | sizes: {0: 2348686, 1: 2348885, 13: 2348885, 24: 2348941, 35: 2348969, 37: 2349259, 46: 2349415, 16553: 2380732, 16558: 2389730, 16559: 2389786, 16589: 2389980}
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | --------------------------------------------------
[2025-10-11 09:47:44] 2025-10-11 13:46:54,736 | INFO     | 
[2025-10-11 09:47:44] 2025-10-11 13:46:54,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 09:47:44] 2025-10-11 13:46:54,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:47:44] 2025-10-11 13:46:54,888 | INFO     | job 6837874299 has completed (purged errors)
[2025-10-11 09:47:44] 2025-10-11 13:46:54,888 | INFO     | overall cleanup function is called
[2025-10-11 09:47:44] 2025-10-11 13:46:55,911 | INFO     | --- collectZombieJob: --- 10, [537570]
[2025-10-11 09:47:44] 2025-10-11 13:46:55,911 | INFO     | zombie collector waiting for pid 537570
[2025-10-11 09:47:44] 2025-10-11 13:46:55,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:47:44] 2025-10-11 13:46:55,911 | INFO     | collected zombie processes
[2025-10-11 09:47:44] 2025-10-11 13:46:55,911 | INFO     | will attempt to kill all subprocesses of pid=537570
[2025-10-11 09:47:44] 2025-10-11 13:46:58,203 | INFO     | process IDs to be killed: [537570] (in reverse order)
[2025-10-11 09:47:44] 2025-10-11 13:46:58,421 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:47:44] 2025-10-11 13:46:58,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:47:44] 2025-10-11 13:46:58,480 | INFO     | did not find any defunct processes belonging to 537570
[2025-10-11 09:47:44] 2025-10-11 13:46:58,639 | INFO     | did not find any defunct processes belonging to 537570
[2025-10-11 09:47:44] 2025-10-11 13:46:58,640 | INFO     | ready for new job
[2025-10-11 09:47:44] 2025-10-11 13:46:58,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:47:44] 2025-10-11 13:46:58,665 | INFO     | ***************************************
[2025-10-11 09:47:44] 2025-10-11 13:46:58,666 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:47:44] 2025-10-11 13:46:58,666 | INFO     | ***************************************
[2025-10-11 09:47:44] 2025-10-11 13:46:58,666 | INFO     | 
[2025-10-11 09:47:44] 2025-10-11 13:46:58,693 | INFO     | architecture information:
[2025-10-11 09:47:44] 2025-10-11 13:46:58,718 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:47:44] 2025-10-11 13:46:58,780 | INFO     | cat /etc/os-release:
[2025-10-11 09:47:44] NAME="CentOS Linux"
[2025-10-11 09:47:44] VERSION="7 (Core)"
[2025-10-11 09:47:44] ID="centos"
[2025-10-11 09:47:44] ID_LIKE="rhel fedora"
[2025-10-11 09:47:44] VERSION_ID="7"
[2025-10-11 09:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:47:44] ANSI_COLOR="0;31"
[2025-10-11 09:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:47:44] HOME_URL="https://www.centos.org/"
[2025-10-11 09:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:47:44] 
[2025-10-11 09:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:47:44] 
[2025-10-11 09:47:44] 2025-10-11 13:46:58,781 | INFO     | ***************************************
[2025-10-11 09:47:44] 2025-10-11 13:46:59,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 09:47:44] 2025-10-11 13:46:59,344 | INFO     | sufficient remaining disk space (126955290624 B)
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | INFO     | update_server=False
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:47:44] 2025-10-11 13:46:59,345 | INFO     | aborting loop
[2025-10-11 09:47:44] 2025-10-11 13:46:59,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:47:44] 2025-10-11 13:46:59,469 | INFO     | all data control threads have been joined
[2025-10-11 09:47:44] 2025-10-11 13:46:59,672 | INFO     | all job control threads have been joined
[2025-10-11 09:47:44] 2025-10-11 13:46:59,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:47:44] 2025-10-11 13:47:00,179 | INFO     | all payload control threads have been joined
[2025-10-11 09:47:44] 2025-10-11 13:47:00,351 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,352 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,475 | INFO     | [data] control thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,645 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,678 | INFO     | [job] control thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,708 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:00,775 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,015 | INFO     | [job] validate thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,148 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,185 | INFO     | [payload] control thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,371 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,410 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:47:44] 2025-10-11 13:47:01,555 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,573 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:01,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:05,518 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:47:44] 2025-10-11 13:47:29,992 | INFO     | PID=527168 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 09:47:44] 2025-10-11 13:47:29,992 | INFO     | .. there are 18 such processes running
[2025-10-11 09:47:44] 2025-10-11 13:47:29,993 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:47:44] 2025-10-11 13:47:29,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:47:44] 2025-10-11 13:47:29,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:47:44] 2025-10-11 13:47:36,325 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:47:44] 2025-10-11 13:47:36,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574471071552)>', '<ExcThread(monitor, started 140574103414528)>']
[2025-10-11 09:47:44] 2025-10-11 13:47:37,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:47:44] 2025-10-11 13:47:37,041 | INFO     | [monitor] control thread has ended
[2025-10-11 09:47:44] 2025-10-11 13:47:41,934 | INFO     | all workflow threads have been joined
[2025-10-11 09:47:44] 2025-10-11 13:47:41,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:47:44] 2025-10-11 13:47:41,935 | INFO     | traces error code: 0
[2025-10-11 09:47:44] 2025-10-11 13:47:41,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:47:44] 2025-10-11 13:47:43,048 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:47:44] 2025-10-11 13:47:43,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:47:44] 2025-10-11 13:47:43,089 [wrapper] pilotpid: 527168
[2025-10-11 09:47:44] 2025-10-11 13:47:43,254 [wrapper] Pilot exit status: 0
[2025-10-11 09:47:44] 2025-10-11 13:47:43,481 [wrapper] pandaids: 6837874299
[2025-10-11 09:47:44] 2025-10-11 13:47:43,698 [wrapper] cleanup supervisor_pilot 1056017 527169
[2025-10-11 09:47:44] 2025-10-11 13:47:43,702 [wrapper] Test setup, not cleaning
[2025-10-11 09:47:44] 2025-10-11 13:47:43,705 [wrapper] apfmon messages muted
[2025-10-11 09:47:44] 2025-10-11 13:47:43,724 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:47:44] 2025-10-11 13:47:43,773 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:47:44]  *** Error codes and diagnostics ***
[2025-10-11 09:47:44]     "exeErrorCode": 0,
[2025-10-11 09:47:44]     "exeErrorDiag": "",
[2025-10-11 09:47:44]     "pilotErrorCode": 0,
[2025-10-11 09:47:44]     "pilotErrorDiag": "",
[2025-10-11 09:47:44]  *** Listing of results directory ***
[2025-10-11 09:47:44] total 417388
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 19:13 queuedata.json
[2025-10-11 09:47:44] -rwx------. 1 boincer umatlas     36292 Oct 10 19:13 runpilot2-wrapper.sh
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas       100 Oct 11 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:47:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 05:07 run_atlas
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas       105 Oct 11 05:07 job.xml
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas 224140013 Oct 11 05:07 EVNT.46676267._001891.pool.root.1
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:07 start_atlas.sh
[2025-10-11 09:47:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 05:07 shared
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 05:07 input.tar.gz
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas         0 Oct 11 05:07 boinc_lockfile
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 05:07 pandaJob.out
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas    975509 Oct 11 05:09 agis_schedconf.cvmfs.json
[2025-10-11 09:47:44] drwx------. 5 boincer umatlas      4096 Oct 11 05:09 pilot3
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 09:40 init_data.xml
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas 194332672 Oct 11 09:45 HITS.46676269._046821.pool.root.1
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas       530 Oct 11 09:45 boinc_task_state.xml
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas      1045 Oct 11 09:46 memory_monitor_summary.json
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas   1560580 Oct 11 09:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas    480691 Oct 11 09:46 log.46676269._046821.job.log.tgz.1
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas      7835 Oct 11 09:46 heartbeat.json
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas        95 Oct 11 09:47 pilot_heartbeat.json
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas      4824 Oct 11 09:47 pilotlog.txt
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:47 boinc_mmap_file
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas   2033121 Oct 11 09:47 log.46676269._046821.job.log.1
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas        28 Oct 11 09:47 wrapper_checkpoint.txt
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas       357 Oct 11 09:47 output.list
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:47 runtime_log
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas   2529280 Oct 11 09:47 result.tar.gz
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 09:47 runtime_log.err
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas       658 Oct 11 09:47 54NODmDUbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsgeNDmBLyOIm.diag
[2025-10-11 09:47:44] -rw-r--r--. 1 boincer umatlas     21230 Oct 11 09:47 stderr.txt
[2025-10-11 09:47:44] HITS file was successfully produced:
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas 194332672 Oct 11 09:45 shared/HITS.pool.root.1
[2025-10-11 09:47:44]  *** Contents of shared directory: ***
[2025-10-11 09:47:44] total 411724
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas 224140013 Oct 11 05:07 ATLAS.root_0
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 05:07 start_atlas.sh
[2025-10-11 09:47:44] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 05:07 input.tar.gz
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas 194332672 Oct 11 09:45 HITS.pool.root.1
[2025-10-11 09:47:44] -rw-------. 1 boincer umatlas   2529280 Oct 11 09:47 result.tar.gz
09:47:46 (521942): run_atlas exited; CPU time 50970.146855
09:47:46 (521942): called boinc_finish(0)

</stderr_txt>
]]>

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