Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:54:45 (6023): wrapper (7.7.26015): starting
03:54:45 (6023): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 03:54:45] Arguments: --nthreads 8
[2025-10-11 03:54:45] Threads: 8
[2025-10-11 03:54:45] Checking for CVMFS
[2025-10-11 03:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:54:46] 2.11.2.0 2857 1122 68536 151576 3 57 12844519 20275201 1 130560 0 769405 99.990 39926 34992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 03:54:46] CVMFS is ok
[2025-10-11 03:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:54:46] Further information can be found at the LHC@home message board.
[2025-10-11 03:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:54:46] Checking for apptainer binary...
[2025-10-11 03:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:54:46] Running /usr/bin/apptainer --version
[2025-10-11 03:54:46] apptainer version 1.3.2-1.el7
[2025-10-11 03:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:54:48] c-204-10.aglt2.org
[2025-10-11 03:54:48] apptainer works
[2025-10-11 03:54:48] Set ATHENA_PROC_NUMBER=8
[2025-10-11 03:54:48] Set ATHENA_CORE_NUMBER=8
[2025-10-11 03:54:48] Starting ATLAS job with PandaID=6837960858
[2025-10-11 03:54:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:31:40 (11968): wrapper (7.7.26015): starting
04:31:40 (11968): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 04:31:40] Arguments: --nthreads 8
[2025-10-11 04:31:40] Threads: 8
[2025-10-11 04:31:40] This job has been restarted, cleaning up previous attempt
[2025-10-11 04:31:40] Checking for CVMFS
[2025-10-11 04:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:31:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:31:40] 2.11.2.0 2857 1159 72372 151577 2 11 12886140 20275201 1 130560 0 830122 99.990 41223 35143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 04:31:40] CVMFS is ok
[2025-10-11 04:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:31:40] Further information can be found at the LHC@home message board.
[2025-10-11 04:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:31:40] Checking for apptainer binary...
[2025-10-11 04:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:31:40] Running /usr/bin/apptainer --version
[2025-10-11 04:31:40] apptainer version 1.3.2-1.el7
[2025-10-11 04:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:31:42] c-204-10.aglt2.org
[2025-10-11 04:31:42] apptainer works
[2025-10-11 04:31:42] Set ATHENA_PROC_NUMBER=8
[2025-10-11 04:31:42] Set ATHENA_CORE_NUMBER=8
[2025-10-11 04:31:42] Starting ATLAS job with PandaID=6837960858
[2025-10-11 04:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 06:36:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 06:36:21] 2025-10-11 10:36:05,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 06:36:21] 2025-10-11 10:36:05,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 06:36:21] 2025-10-11 10:36:05,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 06:36:21] 2025-10-11 10:36:05,190 | INFO     | fitting pss+swap vs Time
[2025-10-11 06:36:21] 2025-10-11 10:36:05,190 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | sum of deviations: -10280059190.500006
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | mean x: 1760175241.5
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | mean y: 2547102.073770492
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | -- intersect: 32140838692.578663
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | intersect: 32140838692.578663
[2025-10-11 06:36:21] 2025-10-11 10:36:05,191 | INFO     | chi2: 2.38074853371952
[2025-10-11 06:36:21] 2025-10-11 10:36:05,192 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,192 | INFO     | sum of deviations: -1378227960.9999976
[2025-10-11 06:36:21] 2025-10-11 10:36:05,192 | INFO     | mean x: 1760175089.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,192 | INFO     | mean y: 2566922.735042735
[2025-10-11 06:36:21] 2025-10-11 10:36:05,193 | INFO     | -- intersect: 4887657768.965798
[2025-10-11 06:36:21] 2025-10-11 10:36:05,193 | INFO     | intersect: 4887657768.965798
[2025-10-11 06:36:21] 2025-10-11 10:36:05,193 | INFO     | chi2: 1.6203017292594408
[2025-10-11 06:36:21] 2025-10-11 10:36:05,193 | INFO     | current chi2=1.6203017292594408 (change=31.94150048564805 %)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,193 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,194 | INFO     | sum of deviations: -720868689.4999986
[2025-10-11 06:36:21] 2025-10-11 10:36:05,194 | INFO     | mean x: 1760174936.5
[2025-10-11 06:36:21] 2025-10-11 10:36:05,194 | INFO     | mean y: 2568567.4910714286
[2025-10-11 06:36:21] 2025-10-11 10:36:05,194 | INFO     | -- intersect: 2915391776.79859
[2025-10-11 06:36:21] 2025-10-11 10:36:05,194 | INFO     | intersect: 2915391776.79859
[2025-10-11 06:36:21] 2025-10-11 10:36:05,195 | INFO     | chi2: 1.6224528382659338
[2025-10-11 06:36:21] 2025-10-11 10:36:05,195 | INFO     | current chi2=1.6224528382659338 (change=-0.1327597797156041 %)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,195 | INFO     | right removable region: 111
[2025-10-11 06:36:21] 2025-10-11 10:36:05,195 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | sum of deviations: -28655813840.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | mean x: 1760175394.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | mean y: 2588485.982905983
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | -- intersect: 101572344795.4366
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | intersect: 101572344795.4366
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | chi2: 0.9171168000473531
[2025-10-11 06:36:21] 2025-10-11 10:36:05,196 | INFO     | current chi2=0.9171168000473531 (change=61.47779628726634 %)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,197 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,197 | INFO     | sum of deviations: -28088493099.999996
[2025-10-11 06:36:21] 2025-10-11 10:36:05,197 | INFO     | mean x: 1760175546.5
[2025-10-11 06:36:21] 2025-10-11 10:36:05,197 | INFO     | mean y: 2586921.6428571427
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | -- intersect: 113500154733.95677
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | intersect: 113500154733.95677
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | chi2: 0.8915932065270016
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | current chi2=0.8915932065270016 (change=2.783025402983965 %)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | left removable region: 20
[2025-10-11 06:36:21] 2025-10-11 10:36:05,198 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,199 | INFO     | sum of deviations: -12596263381.000002
[2025-10-11 06:36:21] 2025-10-11 10:36:05,199 | INFO     | mean x: 1760175516.0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,199 | INFO     | mean y: 2597196.6263736263
[2025-10-11 06:36:21] 2025-10-11 10:36:05,199 | INFO     | -- intersect: 94898520462.35823
[2025-10-11 06:36:21] 2025-10-11 10:36:05,199 | INFO     | intersect: 94898520462.35823
[2025-10-11 06:36:21] 2025-10-11 10:36:05,200 | INFO     | chi2: 0.0810744553664204
[2025-10-11 06:36:21] 2025-10-11 10:36:05,200 | INFO     | -- intersect: 94898520462.35823
[2025-10-11 06:36:21] 2025-10-11 10:36:05,200 | INFO     | current memory leak: -53.91 B/s (using 91 data points, chi2=0.08)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,200 | INFO     | could have reported an average CPU frequency of 1924 MHz (8 samples)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,200 | INFO     | ..............................
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . Timing measurements:
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . get job = 0 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . initial setup = 1 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . payload setup = 8 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . stage-in = 0 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . payload execution = 7406 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . stage-out = 0 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | . log creation = 0 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,201 | INFO     | ..............................
[2025-10-11 06:36:21] 2025-10-11 10:36:05,235 | INFO     | time since job start (7446s) is within the limit (172800.0s)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,293 | INFO     | 
[2025-10-11 06:36:21] 2025-10-11 10:36:05,293 | INFO     | job summary report
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | --------------------------------------------------
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | PanDA job id: 6837960858
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | task id: 46676269
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | errors: (none)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 06:36:21] 2025-10-11 10:36:05,294 | INFO     | pilot state: finished 
[2025-10-11 06:36:21] 2025-10-11 10:36:05,295 | INFO     | transexitcode: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,295 | INFO     | exeerrorcode: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,295 | INFO     | exeerrordiag: 
[2025-10-11 06:36:21] 2025-10-11 10:36:05,295 | INFO     | exitcode: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,295 | INFO     | exitmsg: OK
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | cpuconsumptiontime: 54678 s
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | nevents: 400
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | neventsw: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | pid: 22153
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | pgrp: 22153
[2025-10-11 06:36:21] 2025-10-11 10:36:05,296 | INFO     | corecount: 8
[2025-10-11 06:36:21] 2025-10-11 10:36:05,297 | INFO     | event service: False
[2025-10-11 06:36:21] 2025-10-11 10:36:05,297 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 7418: 2376537, 7420: 2385535, 7423: 2385719, 7428: 2385913}
[2025-10-11 06:36:21] 2025-10-11 10:36:05,297 | INFO     | --------------------------------------------------
[2025-10-11 06:36:21] 2025-10-11 10:36:05,297 | INFO     | 
[2025-10-11 06:36:21] 2025-10-11 10:36:05,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 06:36:21] 2025-10-11 10:36:05,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 06:36:21] 2025-10-11 10:36:05,331 | INFO     | job 6837960858 has completed (purged errors)
[2025-10-11 06:36:21] 2025-10-11 10:36:05,331 | INFO     | overall cleanup function is called
[2025-10-11 06:36:21] 2025-10-11 10:36:06,339 | INFO     | --- collectZombieJob: --- 10, [22153]
[2025-10-11 06:36:21] 2025-10-11 10:36:06,340 | INFO     | zombie collector waiting for pid 22153
[2025-10-11 06:36:21] 2025-10-11 10:36:06,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 06:36:21] 2025-10-11 10:36:06,340 | INFO     | collected zombie processes
[2025-10-11 06:36:21] 2025-10-11 10:36:06,340 | INFO     | will attempt to kill all subprocesses of pid=22153
[2025-10-11 06:36:21] 2025-10-11 10:36:06,432 | INFO     | process IDs to be killed: [22153] (in reverse order)
[2025-10-11 06:36:21] 2025-10-11 10:36:06,492 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 06:36:21] 2025-10-11 10:36:06,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 06:36:21] 2025-10-11 10:36:06,497 | INFO     | did not find any defunct processes belonging to 22153
[2025-10-11 06:36:21] 2025-10-11 10:36:06,500 | INFO     | did not find any defunct processes belonging to 22153
[2025-10-11 06:36:21] 2025-10-11 10:36:06,501 | INFO     | ready for new job
[2025-10-11 06:36:21] 2025-10-11 10:36:06,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 06:36:21] 2025-10-11 10:36:06,503 | INFO     | ***************************************
[2025-10-11 06:36:21] 2025-10-11 10:36:06,503 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 06:36:21] 2025-10-11 10:36:06,503 | INFO     | ***************************************
[2025-10-11 06:36:21] 2025-10-11 10:36:06,503 | INFO     | 
[2025-10-11 06:36:21] 2025-10-11 10:36:06,504 | INFO     | architecture information:
[2025-10-11 06:36:21] 2025-10-11 10:36:06,504 | INFO     | executing command: cat /etc/os-release
[2025-10-11 06:36:21] 2025-10-11 10:36:06,523 | INFO     | cat /etc/os-release:
[2025-10-11 06:36:21] NAME="CentOS Linux"
[2025-10-11 06:36:21] VERSION="7 (Core)"
[2025-10-11 06:36:21] ID="centos"
[2025-10-11 06:36:21] ID_LIKE="rhel fedora"
[2025-10-11 06:36:21] VERSION_ID="7"
[2025-10-11 06:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 06:36:21] ANSI_COLOR="0;31"
[2025-10-11 06:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 06:36:21] HOME_URL="https://www.centos.org/"
[2025-10-11 06:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 06:36:21] 
[2025-10-11 06:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 06:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 06:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 06:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 06:36:21] 
[2025-10-11 06:36:21] 2025-10-11 10:36:06,524 | INFO     | ***************************************
[2025-10-11 06:36:21] 2025-10-11 10:36:07,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 06:36:21] 2025-10-11 10:36:07,045 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-11 06:36:21] 2025-10-11 10:36:07,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 06:36:21] 2025-10-11 10:36:07,046 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 06:36:21] 2025-10-11 10:36:07,046 | INFO     | update_server=False
[2025-10-11 06:36:21] 2025-10-11 10:36:07,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 06:36:21] 2025-10-11 10:36:07,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 06:36:21] 2025-10-11 10:36:07,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 06:36:21] 2025-10-11 10:36:07,048 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 06:36:21] 2025-10-11 10:36:07,048 | INFO     | aborting loop
[2025-10-11 06:36:21] 2025-10-11 10:36:07,048 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 06:36:21] 2025-10-11 10:36:07,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 06:36:21] 2025-10-11 10:36:07,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 06:36:21] 2025-10-11 10:36:07,692 | INFO     | all payload control threads have been joined
[2025-10-11 06:36:21] 2025-10-11 10:36:07,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 06:36:21] 2025-10-11 10:36:07,901 | INFO     | all job control threads have been joined
[2025-10-11 06:36:21] 2025-10-11 10:36:08,049 | INFO     | [job] queue monitor thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,052 | INFO     | [job] retrieve thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,053 | INFO     | [job] job monitor thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,070 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,097 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,099 | INFO     | all data control threads have been joined
[2025-10-11 06:36:21] 2025-10-11 10:36:08,144 | INFO     | [data] copytool_in thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,693 | INFO     | [payload] control thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,809 | INFO     | [job] validate thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:08,906 | INFO     | [job] control thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:09,105 | INFO     | [data] control thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:09,117 | INFO     | [payload] validate_post thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:09,145 | INFO     | [payload] failed_post thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:09,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:09,795 | INFO     | [data] copytool_out thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:10,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 06:36:21] 2025-10-11 10:36:11,019 | INFO     | [monitor] cgroup control has ended
[2025-10-11 06:36:21] 2025-10-11 10:36:14,063 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 06:36:21] 2025-10-11 10:36:16,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372520281920)>', '<ExcThread(monitor, started 140371921192704)>']
[2025-10-11 06:36:21] 2025-10-11 10:36:17,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 06:36:21] 2025-10-11 10:36:17,093 | INFO     | [monitor] control thread has ended
[2025-10-11 06:36:21] 2025-10-11 10:36:21,152 | INFO     | all workflow threads have been joined
[2025-10-11 06:36:21] 2025-10-11 10:36:21,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 06:36:21] 2025-10-11 10:36:21,153 | INFO     | traces error code: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:21,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 06:36:21] 2025-10-11 10:36:21,260 [wrapper] ==== pilot stdout END ====
[2025-10-11 06:36:21] 2025-10-11 10:36:21,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 06:36:21] 2025-10-11 10:36:21,269 [wrapper] pilotpid: 15675
[2025-10-11 06:36:21] 2025-10-11 10:36:21,274 [wrapper] Pilot exit status: 0
[2025-10-11 06:36:21] 2025-10-11 10:36:21,293 [wrapper] pandaids: 6837960858 6837960858
[2025-10-11 06:36:21] 2025-10-11 10:36:21,338 [wrapper] cleanup supervisor_pilot 20650 15676
[2025-10-11 06:36:21] 2025-10-11 10:36:21,343 [wrapper] Test setup, not cleaning
[2025-10-11 06:36:21] 2025-10-11 10:36:21,349 [wrapper] apfmon messages muted
[2025-10-11 06:36:21] 2025-10-11 10:36:21,353 [wrapper] ==== wrapper stdout END ====
[2025-10-11 06:36:21] 2025-10-11 10:36:21,359 [wrapper] ==== wrapper stderr END ====
[2025-10-11 06:36:21]  *** Error codes and diagnostics ***
[2025-10-11 06:36:21]     "exeErrorCode": 0,
[2025-10-11 06:36:21]     "exeErrorDiag": "",
[2025-10-11 06:36:21]     "pilotErrorCode": 0,
[2025-10-11 06:36:21]     "pilotErrorDiag": "",
[2025-10-11 06:36:21]  *** Listing of results directory ***
[2025-10-11 06:36:21] total 621984
[2025-10-11 06:36:21] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 22:25 pilot3.tar.gz
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 22:39 queuedata.json
[2025-10-11 06:36:21] -rwx------ 1 boincer umatlas     36292 Oct 10 22:40 runpilot2-wrapper.sh
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas       100 Oct 11 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 06:36:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 03:54 run_atlas
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas       105 Oct 11 03:54 job.xml
[2025-10-11 06:36:21] -rw-r--r-- 3 boincer umatlas 219386449 Oct 11 03:54 EVNT.46676267._001990.pool.root.1
[2025-10-11 06:36:21] -rw-r--r-- 3 boincer umatlas 219386449 Oct 11 03:54 ATLAS.root_0
[2025-10-11 06:36:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 03:54 start_atlas.sh
[2025-10-11 06:36:21] drwxrwx--x 2 boincer umatlas      4096 Oct 11 03:54 shared
[2025-10-11 06:36:21] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 03:54 input.tar.gz
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas         0 Oct 11 03:54 boinc_lockfile
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas   1560580 Oct 11 03:55 agis_ddmendpoints.agis.ALL.json
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 04:31 pandaJob.out
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas    975509 Oct 11 04:31 agis_schedconf.cvmfs.json
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 06:27 init_data.xml
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas 191374174 Oct 11 06:35 HITS.46676269._049387.pool.root.1
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas        96 Oct 11 06:35 pilot_heartbeat.json
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas       530 Oct 11 06:35 boinc_task_state.xml
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas      1048 Oct 11 06:35 memory_monitor_summary.json
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas    379267 Oct 11 06:35 log.46676269._049387.job.log.tgz.1
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas      7851 Oct 11 06:36 heartbeat.json
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas        27 Oct 11 06:36 wrapper_checkpoint.txt
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 06:36 boinc_mmap_file
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas      4552 Oct 11 06:36 pilotlog.txt
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas   1050089 Oct 11 06:36 log.46676269._049387.job.log.1
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas       357 Oct 11 06:36 output.list
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas       620 Oct 11 06:36 runtime_log
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas   1443840 Oct 11 06:36 result.tar.gz
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas       784 Oct 11 06:36 wX4MDmpheR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme9eNDmeFTppn.diag
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas      8788 Oct 11 06:36 runtime_log.err
[2025-10-11 06:36:21] -rw-r--r-- 1 boincer umatlas     22942 Oct 11 06:36 stderr.txt
[2025-10-11 06:36:21] HITS file was successfully produced:
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas 191374174 Oct 11 06:35 shared/HITS.pool.root.1
[2025-10-11 06:36:21]  *** Contents of shared directory: ***
[2025-10-11 06:36:21] total 403132
[2025-10-11 06:36:21] -rw-r--r-- 3 boincer umatlas 219386449 Oct 11 03:54 ATLAS.root_0
[2025-10-11 06:36:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 03:54 start_atlas.sh
[2025-10-11 06:36:21] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 03:54 input.tar.gz
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas 191374174 Oct 11 06:35 HITS.pool.root.1
[2025-10-11 06:36:21] -rw------- 1 boincer umatlas   1443840 Oct 11 06:36 result.tar.gz
06:36:23 (11968): run_atlas exited; CPU time 54691.650255
06:36:23 (11968): called boinc_finish(0)

</stderr_txt>
]]>

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