Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:00:38 (647363): wrapper (7.7.26015): starting
01:00:38 (647363): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 01:00:38] Arguments: --nthreads 12
[2025-10-11 01:00:38] Threads: 12
[2025-10-11 01:00:38] Checking for CVMFS
[2025-10-11 01:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 01:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 01:00:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 01:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 01:00:39] 2.11.5.0 80137 28186 264728 151576 0 707 45273224 45568001 16253 130560 0 241180311 99.852 104238830 22544 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 01:00:39] CVMFS is ok
[2025-10-11 01:00:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 01:00:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 01:00:39] Further information can be found at the LHC@home message board.
[2025-10-11 01:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 01:00:39] Checking for apptainer binary...
[2025-10-11 01:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 01:00:39] Running /usr/bin/apptainer --version
[2025-10-11 01:00:39] apptainer version 1.4.1-1.el9
[2025-10-11 01:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 01:00:39] wns0059.triumf.lcg
[2025-10-11 01:00:39] apptainer works
[2025-10-11 01:00:39] Set ATHENA_PROC_NUMBER=12
[2025-10-11 01:00:39] Set ATHENA_CORE_NUMBER=12
[2025-10-11 01:00:39] Starting ATLAS job with PandaID=6838117129
[2025-10-11 01:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 01:05:12]  *** The last 200 lines of the pilot log: ***
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | WARNING  | wrong length of table data, x=[1760169705.0], y=[1503.0] (must be same and length>=4)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . Timing measurements:
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . get job = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . initial setup = 3 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload setup = 12 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-in = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload execution = 42 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-out = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . log creation = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838117129/pilotlog.txt
[2025-10-11 01:05:12] 2025-10-11 08:04:38,587 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 01:05:12] - Log from pilotlog.txt -
[2025-10-11 01:05:12] 2025-10-11 08:04:38,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838117129/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | INFO     | extracted standard info from prmon json
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | WARNING  | wrong length of table data, x=[1760169705.0], y=[1503.0] (must be same and length>=4)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . Timing measurements:
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . get job = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . initial setup = 3 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload setup = 12 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-in = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload execution = 42 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-out = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . log creation = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838117129/pilotlog.txt
[2025-10-11 01:05:12] 2025-10-11 08:04:38,588 | WARNING  | 
[2025-10-11 01:05:12] [begin log extracts]
[2025-10-11 01:05:12] - Log from pilotlog.txt -
[2025-10-11 01:05:12] 2025-10-11 08:04:38,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838117129/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | INFO     | extracted standard info from prmon json
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:05:12] 2025-10-11 08:04:38,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | WARNING  | wrong length of table data, x=[1760169705.0], y=[1503.0] (must be same and length>=4)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . Timing measurements:
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . get job = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,572 | INFO     | . initial setup = 3 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload setup = 12 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-in = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . payload execution = 42 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . stage-out = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | . log creation = 0 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | ..............................
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 01:05:12] 2025-10-11 08:04:38,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838117129/pilotlog.txt
[2025-10-11 01:05:12] [end log extracts]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,588 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,589 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 01:05:12] 2025-10-11 08:04:38,697 | INFO     | 
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | job summary report
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | --------------------------------------------------
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | PanDA job id: 6838117129
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | task id: 46676269
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 01:02:11,214 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | pilot state: failed 
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | transexitcode: 65
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | exeerrorcode: 65
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | exitcode: 65
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,698 | INFO     | cpuconsumptiontime: 22 s
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | nevents: 0
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | neventsw: 0
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | pid: 657817
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | pgrp: 657817
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | corecount: 12
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | event service: False
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | sizes: {0: 2348028, 1: 2348881, 2: 2348881, 12: 2349171, 13: 2349199, 58: 2372462, 59: 2372566, 60: 2376886, 61: 2376914, 197: 2377080}
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | --------------------------------------------------
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | 
[2025-10-11 01:05:12] 2025-10-11 08:04:38,699 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 01:05:12] 2025-10-11 08:04:38,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 01:05:12] 2025-10-11 08:04:38,847 | INFO     | job 6838117129 has completed (purged errors)
[2025-10-11 01:05:12] 2025-10-11 08:04:38,847 | INFO     | overall cleanup function is called
[2025-10-11 01:05:12] 2025-10-11 08:04:39,853 | INFO     | --- collectZombieJob: --- 10, [657817]
[2025-10-11 01:05:12] 2025-10-11 08:04:39,854 | INFO     | zombie collector waiting for pid 657817
[2025-10-11 01:05:12] 2025-10-11 08:04:39,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 01:05:12] 2025-10-11 08:04:39,854 | INFO     | collected zombie processes
[2025-10-11 01:05:12] 2025-10-11 08:04:39,854 | INFO     | will attempt to kill all subprocesses of pid=657817
[2025-10-11 01:05:12] 2025-10-11 08:04:41,289 | INFO     | process IDs to be killed: [657817] (in reverse order)
[2025-10-11 01:05:12] 2025-10-11 08:04:41,644 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 01:05:12] 2025-10-11 08:04:41,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 01:05:12] 2025-10-11 08:04:41,725 | INFO     | did not find any defunct processes belonging to 657817
[2025-10-11 01:05:12] 2025-10-11 08:04:41,806 | INFO     | did not find any defunct processes belonging to 657817
[2025-10-11 01:05:12] 2025-10-11 08:04:41,850 | INFO     | ready for new job
[2025-10-11 01:05:12] 2025-10-11 08:04:41,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 01:05:12] 2025-10-11 08:04:41,866 | INFO     | ***************************************
[2025-10-11 01:05:12] 2025-10-11 08:04:41,867 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 01:05:12] 2025-10-11 08:04:41,867 | INFO     | ***************************************
[2025-10-11 01:05:12] 2025-10-11 08:04:41,867 | INFO     | 
[2025-10-11 01:05:12] 2025-10-11 08:04:41,869 | INFO     | architecture information:
[2025-10-11 01:05:12] 2025-10-11 08:04:41,882 | INFO     | executing command: cat /etc/os-release
[2025-10-11 01:05:12] 2025-10-11 08:04:41,961 | INFO     | cat /etc/os-release:
[2025-10-11 01:05:12] NAME="CentOS Linux"
[2025-10-11 01:05:12] VERSION="7 (Core)"
[2025-10-11 01:05:12] ID="centos"
[2025-10-11 01:05:12] ID_LIKE="rhel fedora"
[2025-10-11 01:05:12] VERSION_ID="7"
[2025-10-11 01:05:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 01:05:12] ANSI_COLOR="0;31"
[2025-10-11 01:05:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 01:05:12] HOME_URL="https://www.centos.org/"
[2025-10-11 01:05:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 01:05:12] 
[2025-10-11 01:05:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 01:05:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 01:05:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 01:05:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 01:05:12] 
[2025-10-11 01:05:12] 2025-10-11 08:04:41,961 | INFO     | ***************************************
[2025-10-11 01:05:12] 2025-10-11 08:04:42,466 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 01:05:12] 2025-10-11 08:04:42,516 | INFO     | sufficient remaining disk space (1964126502912 B)
[2025-10-11 01:05:12] 2025-10-11 08:04:42,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 01:05:12] 2025-10-11 08:04:42,517 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 01:05:12] 2025-10-11 08:04:42,517 | INFO     | update_server=False
[2025-10-11 01:05:12] 2025-10-11 08:04:42,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 01:05:12] 2025-10-11 08:04:42,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:05:12] 2025-10-11 08:04:42,555 | INFO     | aborting loop
[2025-10-11 01:05:12] 2025-10-11 08:04:42,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 01:05:12] 2025-10-11 08:04:43,355 | INFO     | all data control threads have been joined
[2025-10-11 01:05:12] 2025-10-11 08:04:43,482 | INFO     | all payload control threads have been joined
[2025-10-11 01:05:12] 2025-10-11 08:04:43,522 | INFO     | [job] retrieve thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:43,560 | INFO     | [job] job monitor thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:43,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:43,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:05:12] 2025-10-11 08:04:43,884 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:43,970 | INFO     | all job control threads have been joined
[2025-10-11 01:05:12] 2025-10-11 08:04:44,056 | INFO     | [payload] validate_post thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,244 | INFO     | [data] copytool_in thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,261 | INFO     | [job] validate thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,362 | INFO     | [data] control thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,458 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,477 | INFO     | [payload] failed_post thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 01:05:12] 2025-10-11 08:04:44,497 | INFO     | [payload] control thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,750 | INFO     | [job] queue monitor thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,856 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,880 | INFO     | [data] copytool_out thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:44,976 | INFO     | [job] control thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:48,505 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 01:05:12] 2025-10-11 08:04:59,746 | INFO     | [monitor] cgroup control has ended
[2025-10-11 01:05:12] 2025-10-11 08:05:00,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163764127552)>', '<ExcThread(monitor, started 140163237803776)>']
[2025-10-11 01:05:12] 2025-10-11 08:05:06,024 | INFO     | all workflow threads have been joined
[2025-10-11 01:05:12] 2025-10-11 08:05:06,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 01:05:12] 2025-10-11 08:05:06,025 | INFO     | traces error code: 0
[2025-10-11 01:05:12] 2025-10-11 08:05:06,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 01:05:12] 2025-10-11 08:05:11,982 | INFO     | PID=651132 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 01:05:12] 2025-10-11 08:05:11,982 | INFO     | .. there are 32 such processes running
[2025-10-11 01:05:12] 2025-10-11 08:05:11,983 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 01:05:12] 2025-10-11 08:05:11,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 01:05:12] 2025-10-11 08:05:11,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 01:05:12] 2025-10-11 08:05:11,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 01:05:12] 2025-10-11 08:05:11,983 | INFO     | [monitor] control thread has ended
[2025-10-11 01:05:12] 2025-10-11 08:05:12,131 [wrapper] ==== pilot stdout END ====
[2025-10-11 01:05:12] 2025-10-11 08:05:12,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 01:05:12] 2025-10-11 08:05:12,241 [wrapper] pilotpid: 651132
[2025-10-11 01:05:12] 2025-10-11 08:05:12,245 [wrapper] Pilot exit status: 0
[2025-10-11 01:05:12] 2025-10-11 08:05:12,330 [wrapper] pandaids: 6838117129
[2025-10-11 01:05:12] 2025-10-11 08:05:12,539 [wrapper] cleanup supervisor_pilot  651138 651133
[2025-10-11 01:05:12] 2025-10-11 08:05:12,551 [wrapper] Test setup, not cleaning
[2025-10-11 01:05:12] 2025-10-11 08:05:12,556 [wrapper] apfmon messages muted
[2025-10-11 01:05:12] 2025-10-11 08:05:12,567 [wrapper] ==== wrapper stdout END ====
[2025-10-11 01:05:12] 2025-10-11 08:05:12,585 [wrapper] ==== wrapper stderr END ====
[2025-10-11 01:05:12]  *** Error codes and diagnostics ***
[2025-10-11 01:05:12]     "exeErrorCode": 65,
[2025-10-11 01:05:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 01:05:12]     "pilotErrorCode": 1305,
[2025-10-11 01:05:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 01:05:12]  *** Listing of results directory ***
[2025-10-11 01:05:12] total 219008
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc    557409 Oct 10 22:13 pilot3.tar.gz
[2025-10-11 01:05:12] -rwx------. 1 boinc boinc     36292 Oct 10 22:18 runpilot2-wrapper.sh
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc      5112 Oct 10 22:18 queuedata.json
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc       100 Oct 11 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 01:05:12] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 01:00 run_atlas
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc       105 Oct 11 01:00 job.xml
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc 220140276 Oct 11 01:00 EVNT.46676267._002084.pool.root.1
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc      6590 Oct 11 01:00 init_data.xml
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:00 start_atlas.sh
[2025-10-11 01:05:12] drwxrwx--x. 2 boinc boinc      4096 Oct 11 01:00 shared
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc    569675 Oct 11 01:00 input.tar.gz
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc         0 Oct 11 01:00 boinc_lockfile
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc      2549 Oct 11 01:00 pandaJob.out
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc    975525 Oct 11 01:00 agis_schedconf.cvmfs.json
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc   1560580 Oct 11 01:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 01:05:12] drwx------. 5 boinc boinc      4096 Oct 11 01:01 pilot3
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc       523 Oct 11 01:02 boinc_task_state.xml
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc       945 Oct 11 01:02 memory_monitor_summary.json
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc     21973 Oct 11 01:02 log.46676269._051859.job.log.tgz.1
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc      8409 Oct 11 01:04 heartbeat.json
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc        23 Oct 11 01:05 wrapper_checkpoint.txt
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc      8192 Oct 11 01:05 boinc_mmap_file
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc        95 Oct 11 01:05 pilot_heartbeat.json
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc       822 Oct 11 01:05 pilotlog.txt
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc     89168 Oct 11 01:05 log.46676269._051859.job.log.1
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc       188 Oct 11 01:05 output.list
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc       620 Oct 11 01:05 runtime_log
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc    133120 Oct 11 01:05 result.tar.gz
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc      8528 Oct 11 01:05 runtime_log.err
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc       645 Oct 11 01:05 oe9KDm1AhR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVUfNDmkd97Bn.diag
[2025-10-11 01:05:12] -rw-r--r--. 1 boinc boinc     21804 Oct 11 01:05 stderr.txt
[2025-10-11 01:05:12] No HITS result produced
[2025-10-11 01:05:12]  *** Contents of shared directory: ***
[2025-10-11 01:05:12] total 215692
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc 220140276 Oct 11 01:00 ATLAS.root_0
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:00 start_atlas.sh
[2025-10-11 01:05:12] -rw-r--r--. 2 boinc boinc    569675 Oct 11 01:00 input.tar.gz
[2025-10-11 01:05:12] -rw-------. 1 boinc boinc    133120 Oct 11 01:05 result.tar.gz
01:05:14 (647363): run_atlas exited; CPU time 29.978221
01:05:14 (647363): called boinc_finish(0)

</stderr_txt>
]]>

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