Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:58:03 (2151824): wrapper (7.7.26015): starting
07:58:03 (2151824): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:58:03] Arguments: --nthreads 12
[2025-10-11 07:58:03] Threads: 12
[2025-10-11 07:58:03] Checking for CVMFS
[2025-10-11 07:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:58:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:58:03] 2.13.2.0 3843265 2993 57496 151584 2 188 3205015 6144001 3668 130560 0 17788577 99.998 222849 466 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:58:03] CVMFS is ok
[2025-10-11 07:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:58:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:58:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:58:03] Further information can be found at the LHC@home message board.
[2025-10-11 07:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:58:03] Checking for apptainer binary...
[2025-10-11 07:58:03] apptainer is not installed, using version from CVMFS
[2025-10-11 07:58:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:58:04] XeonFire
[2025-10-11 07:58:04] apptainer works
[2025-10-11 07:58:04] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:58:04] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:58:04] Starting ATLAS job with PandaID=6837874309
[2025-10-11 07:58:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:55:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:55:37]  status_code=0
[2025-10-11 08:55:37]  storage_token=
[2025-10-11 08:55:37]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837874309/log.46676269._046831.job.log.tgz.1
[2025-10-11 08:55:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/b8/log.46676269._046831.job.log.tgz.1
[2025-10-11 08:55:37]  workdir=None
[2025-10-11 08:55:37] ]
[2025-10-11 08:55:37] 2025-10-11 13:54:49,655 | INFO     | transferring file log.46676269._046831.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837874309/log.46676269._046831.job.log.tgz.1 to /var/lib/boinc
[2025-10-11 08:55:37] 2025-10-11 13:54:49,655 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837874309/log.46676269._046831.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-11 08:55:37] 2025-10-11 13:54:49,670 | INFO     | adding to output.list: log.46676269._046831.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/b8/log.46676269._046831.job.log.tg
[2025-10-11 08:55:37] 2025-10-11 13:54:49,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 08:55:37] 2025-10-11 13:54:49,671 | INFO     | summary of transferred files:
[2025-10-11 08:55:37] 2025-10-11 13:54:49,671 | INFO     |  -- lfn=log.46676269._046831.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 08:55:37] 2025-10-11 13:54:49,671 | INFO     | stage-out finished correctly
[2025-10-11 08:55:37] 2025-10-11 13:54:50,101 | INFO     | time since job start (3383s) is within the limit (172800.0s)
[2025-10-11 08:55:37] 2025-10-11 13:54:50,801 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 08:55:37] 2025-10-11 13:54:50,912 | INFO     | job 6837874309 has state=finished
[2025-10-11 08:55:37] 2025-10-11 13:54:50,913 | INFO     | preparing for final server update for job 6837874309 in state='finished'
[2025-10-11 08:55:37] 2025-10-11 13:54:50,913 | INFO     | this job has now completed (state=finished)
[2025-10-11 08:55:37] 2025-10-11 13:54:50,914 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 08:55:37] 2025-10-11 13:54:50,914 | INFO     | log transfer has been attempted: DONE
[2025-10-11 08:55:37] 2025-10-11 13:54:50,914 | INFO     | job 6837874309 has finished - writing final server update
[2025-10-11 08:55:37] 2025-10-11 13:54:50,914 | INFO     | total number of processed events: 400 (read)
[2025-10-11 08:55:37] 2025-10-11 13:54:50,916 | INFO     | executing command: lscpu
[2025-10-11 08:55:37] 2025-10-11 13:54:50,963 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 08:55:37] 2025-10-11 13:54:52,107 | INFO     | time since job start (3385s) is within the limit (172800.0s)
[2025-10-11 08:55:37] 2025-10-11 13:54:54,042 | WARNING  | process 2162952 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 08:55:37] 2025-10-11 13:54:54,043 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837874309/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:55:37] 2025-10-11 13:54:54,158 | INFO     | PID=2155901 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 08:55:37] 2025-10-11 13:54:54,159 | INFO     | .. there are 5 such processes running
[2025-10-11 08:55:37] 2025-10-11 13:54:54,454 | INFO     | number of running child processes to parent process 2162952: 1
[2025-10-11 08:55:37] 2025-10-11 13:54:54,454 | INFO     | maximum number of monitored processes: 6
[2025-10-11 08:55:37] 2025-10-11 13:54:55,159 | INFO     | time since job start (3388s) is within the limit (172800.0s)
[2025-10-11 08:55:37] 2025-10-11 13:54:56,957 | INFO     | monitor loop #248: job 0:6837874309 is in state 'finished'
[2025-10-11 08:55:37] 2025-10-11 13:54:56,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 08:55:37] 2025-10-11 13:54:57,165 | INFO     | time since job start (3390s) is within the limit (172800.0s)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,689 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 08:55:37] 2025-10-11 13:54:58,702 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2017.0976590909088
[2025-10-11 08:55:37] 2025-10-11 13:54:58,716 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837874309/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,717 | INFO     | extracted standard info from prmon json
[2025-10-11 08:55:37] 2025-10-11 13:54:58,717 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:55:37] 2025-10-11 13:54:58,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:55:37] 2025-10-11 13:54:58,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:55:37] 2025-10-11 13:54:58,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:55:37] 2025-10-11 13:54:58,719 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:55:37] 2025-10-11 13:54:58,719 | INFO     | sum of square deviations: 34277852.0
[2025-10-11 08:55:37] 2025-10-11 13:54:58,719 | INFO     | sum of deviations: -109193110.99999988
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | mean x: 1760189270.5
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | mean y: 2687710.9166666665
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | -- intersect: 5609822673.595055
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | intersect: 5609822673.595055
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | chi2: 0.0034209407905966016
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | -- intersect: 5609822673.595055
[2025-10-11 08:55:37] 2025-10-11 13:54:58,720 | INFO     | current memory leak: -3.19 B/s (using 48 data points, chi2=0.00)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | could have reported an average CPU frequency of 2154 MHz (5 samples)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | ..............................
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . Timing measurements:
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . get job = 0 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . initial setup = 13 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . payload setup = 5 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . stage-in = 0 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . payload execution = 3357 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . stage-out = 0 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,721 | INFO     | . log creation = 0 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,722 | INFO     | ..............................
[2025-10-11 08:55:37] 2025-10-11 13:54:58,823 | INFO     | 
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | job summary report
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | --------------------------------------------------
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | PanDA job id: 6837874309
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | task id: 46676269
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | errors: (none)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | pilot state: finished 
[2025-10-11 08:55:37] 2025-10-11 13:54:58,824 | INFO     | transexitcode: 0
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | exeerrorcode: 0
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | exeerrordiag: 
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | exitcode: 0
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | exitmsg: OK
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | cpuconsumptiontime: 35792 s
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | nevents: 400
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | neventsw: 0
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | pid: 2162952
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | pgrp: 2162952
[2025-10-11 08:55:37] 2025-10-11 13:54:58,825 | INFO     | corecount: 12
[2025-10-11 08:55:37] 2025-10-11 13:54:58,826 | INFO     | event service: False
[2025-10-11 08:55:37] 2025-10-11 13:54:58,826 | INFO     | sizes: {0: 2348692, 1: 2348891, 5: 2349153, 11: 2349209, 3366: 2374721, 3368: 2383733, 3369: 2383917, 3377: 2384143}
[2025-10-11 08:55:37] 2025-10-11 13:54:58,826 | INFO     | --------------------------------------------------
[2025-10-11 08:55:37] 2025-10-11 13:54:58,826 | INFO     | 
[2025-10-11 08:55:37] 2025-10-11 13:54:58,826 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-11 08:55:37] 2025-10-11 13:54:58,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:55:37] 2025-10-11 13:54:58,848 | INFO     | job 6837874309 has completed (purged errors)
[2025-10-11 08:55:37] 2025-10-11 13:54:58,849 | INFO     | overall cleanup function is called
[2025-10-11 08:55:37] 2025-10-11 13:54:59,856 | INFO     | --- collectZombieJob: --- 10, [2162952]
[2025-10-11 08:55:37] 2025-10-11 13:54:59,856 | INFO     | zombie collector waiting for pid 2162952
[2025-10-11 08:55:37] 2025-10-11 13:54:59,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:55:37] 2025-10-11 13:54:59,856 | INFO     | collected zombie processes
[2025-10-11 08:55:37] 2025-10-11 13:54:59,856 | INFO     | will attempt to kill all subprocesses of pid=2162952
[2025-10-11 08:55:37] 2025-10-11 13:55:00,139 | INFO     | process IDs to be killed: [2162952] (in reverse order)
[2025-10-11 08:55:37] 2025-10-11 13:55:00,245 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:55:37] 2025-10-11 13:55:00,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:55:37] 2025-10-11 13:55:00,254 | INFO     | did not find any defunct processes belonging to 2162952
[2025-10-11 08:55:37] 2025-10-11 13:55:00,261 | INFO     | did not find any defunct processes belonging to 2162952
[2025-10-11 08:55:37] 2025-10-11 13:55:00,262 | INFO     | ready for new job
[2025-10-11 08:55:37] 2025-10-11 13:55:00,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:55:37] 2025-10-11 13:55:00,263 | INFO     | ***************************************
[2025-10-11 08:55:37] 2025-10-11 13:55:00,263 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:55:37] 2025-10-11 13:55:00,264 | INFO     | ***************************************
[2025-10-11 08:55:37] 2025-10-11 13:55:00,264 | INFO     | 
[2025-10-11 08:55:37] 2025-10-11 13:55:00,268 | INFO     | architecture information:
[2025-10-11 08:55:37] 2025-10-11 13:55:00,268 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:55:37] 2025-10-11 13:55:00,284 | INFO     | cat /etc/os-release:
[2025-10-11 08:55:37] NAME="CentOS Linux"
[2025-10-11 08:55:37] VERSION="7 (Core)"
[2025-10-11 08:55:37] ID="centos"
[2025-10-11 08:55:37] ID_LIKE="rhel fedora"
[2025-10-11 08:55:37] VERSION_ID="7"
[2025-10-11 08:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:55:37] ANSI_COLOR="0;31"
[2025-10-11 08:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:55:37] HOME_URL="https://www.centos.org/"
[2025-10-11 08:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:55:37] 
[2025-10-11 08:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:55:37] 
[2025-10-11 08:55:37] 2025-10-11 13:55:00,285 | INFO     | ***************************************
[2025-10-11 08:55:37] 2025-10-11 13:55:00,788 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-11 08:55:37] 2025-10-11 13:55:00,804 | INFO     | sufficient remaining disk space (1817063718912 B)
[2025-10-11 08:55:37] 2025-10-11 13:55:00,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:55:37] 2025-10-11 13:55:00,805 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:55:37] 2025-10-11 13:55:00,805 | INFO     | update_server=False
[2025-10-11 08:55:37] 2025-10-11 13:55:00,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:55:37] 2025-10-11 13:55:00,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:55:37] 2025-10-11 13:55:00,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:55:37] 2025-10-11 13:55:00,806 | INFO     | aborting loop
[2025-10-11 08:55:37] 2025-10-11 13:55:00,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:55:37] 2025-10-11 13:55:01,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:55:37] 2025-10-11 13:55:01,427 | INFO     | all data control threads have been joined
[2025-10-11 08:55:37] 2025-10-11 13:55:01,610 | INFO     | all job control threads have been joined
[2025-10-11 08:55:37] 2025-10-11 13:55:01,810 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:01,811 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:01,811 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:01,901 | INFO     | all payload control threads have been joined
[2025-10-11 08:55:37] 2025-10-11 13:55:02,004 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,377 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,379 | INFO     | [job] validate thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,428 | INFO     | [data] control thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,593 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,601 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,615 | INFO     | [job] control thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,769 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,811 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:02,906 | INFO     | [payload] control thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:05,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:11,079 | INFO     | job.realtimelogging is not enabled
[2025-10-11 08:55:37] 2025-10-11 13:55:12,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:55:37] 2025-10-11 13:55:30,751 | INFO     | PID=2155901 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:55:37] 2025-10-11 13:55:30,751 | INFO     | .. there are 5 such processes running
[2025-10-11 08:55:37] 2025-10-11 13:55:30,752 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:55:37] 2025-10-11 13:55:30,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:55:37] 2025-10-11 13:55:30,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:55:37] 2025-10-11 13:55:31,410 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:55:37] 2025-10-11 13:55:32,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133806714804032)>', '<ExcThread(monitor, started 133806300305152)>']
[2025-10-11 08:55:37] 2025-10-11 13:55:32,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:55:37] 2025-10-11 13:55:32,763 | INFO     | [monitor] control thread has ended
[2025-10-11 08:55:37] 2025-10-11 13:55:37,714 | INFO     | all workflow threads have been joined
[2025-10-11 08:55:37] 2025-10-11 13:55:37,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:55:37] 2025-10-11 13:55:37,715 | INFO     | traces error code: 0
[2025-10-11 08:55:37] 2025-10-11 13:55:37,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:55:37] 2025-10-11 13:55:37,811 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:55:37] 2025-10-11 13:55:37,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:55:37] 2025-10-11 13:55:37,817 [wrapper] pilotpid: 2155901
[2025-10-11 08:55:37] 2025-10-11 13:55:37,819 [wrapper] Pilot exit status: 0
[2025-10-11 08:55:37] 2025-10-11 13:55:37,828 [wrapper] pandaids: 6837874309
[2025-10-11 08:55:37] 2025-10-11 13:55:37,875 [wrapper] cleanup supervisor_pilot 2257772 2155902
[2025-10-11 08:55:37] 2025-10-11 13:55:37,878 [wrapper] Test setup, not cleaning
[2025-10-11 08:55:37] 2025-10-11 13:55:37,881 [wrapper] apfmon messages muted
[2025-10-11 08:55:37] 2025-10-11 13:55:37,883 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:55:37] 2025-10-11 13:55:37,886 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:55:37]  *** Error codes and diagnostics ***
[2025-10-11 08:55:37]     "exeErrorCode": 0,
[2025-10-11 08:55:37]     "exeErrorDiag": "",
[2025-10-11 08:55:37]     "pilotErrorCode": 0,
[2025-10-11 08:55:37]     "pilotErrorDiag": "",
[2025-10-11 08:55:37]  *** Listing of results directory ***
[2025-10-11 08:55:37] total 418448
[2025-10-11 08:55:37] -rw-r--r-- 1 mark mark    557409 Oct 10 17:56 pilot3.tar.gz
[2025-10-11 08:55:37] -rwx------ 1 mark mark     36292 Oct 10 18:10 runpilot2-wrapper.sh
[2025-10-11 08:55:37] -rw-r--r-- 1 mark mark      5112 Oct 10 18:10 queuedata.json
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark       100 Oct 11 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:55:37] -rwxr-xr-x 1 mark mark      7986 Oct 11 07:58 run_atlas
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark       105 Oct 11 07:58 job.xml
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark 224140013 Oct 11 07:58 EVNT.46676267._001891.pool.root.1
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark     15120 Oct 11 07:58 start_atlas.sh
[2025-10-11 08:55:37] drwxrwx--x 2 mark mark      4096 Oct 11 07:58 shared
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark    569680 Oct 11 07:58 input.tar.gz
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark      9341 Oct 11 07:58 init_data.xml
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark         0 Oct 11 07:58 boinc_setup_complete
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark         0 Oct 11 07:58 boinc_lockfile
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark      2549 Oct 11 07:58 pandaJob.out
[2025-10-11 08:55:37] -rw------- 1 mark mark    975504 Oct 11 07:58 agis_schedconf.cvmfs.json
[2025-10-11 08:55:37] -rw------- 1 mark mark   1560580 Oct 11 07:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:55:37] drwx------ 5 mark mark      4096 Oct 11 07:58 pilot3
[2025-10-11 08:55:37] -rw------- 1 mark mark 198675590 Oct 11 08:54 HITS.46676269._046831.pool.root.1
[2025-10-11 08:55:37] -rw------- 1 mark mark        95 Oct 11 08:54 pilot_heartbeat.json
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark       529 Oct 11 08:54 boinc_task_state.xml
[2025-10-11 08:55:37] -rw------- 1 mark mark      1032 Oct 11 08:54 memory_monitor_summary.json
[2025-10-11 08:55:37] -rw------- 1 mark mark    375285 Oct 11 08:54 log.46676269._046831.job.log.tgz.1
[2025-10-11 08:55:37] -rw------- 1 mark mark      7779 Oct 11 08:54 heartbeat.json
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark      8192 Oct 11 08:55 boinc_mmap_file
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark        27 Oct 11 08:55 wrapper_checkpoint.txt
[2025-10-11 08:55:37] -rw------- 1 mark mark      4904 Oct 11 08:55 pilotlog.txt
[2025-10-11 08:55:37] -rw------- 1 mark mark    510748 Oct 11 08:55 log.46676269._046831.job.log.1
[2025-10-11 08:55:37] -rw------- 1 mark mark       357 Oct 11 08:55 output.list
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark       620 Oct 11 08:55 runtime_log
[2025-10-11 08:55:37] -rw------- 1 mark mark    901120 Oct 11 08:55 result.tar.gz
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark      8759 Oct 11 08:55 runtime_log.err
[2025-10-11 08:55:37] -rw------- 1 mark mark       644 Oct 11 08:55 4JJODmJRbR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUmQMDmfZ7Mkn.diag
[2025-10-11 08:55:37] -rw-rw-r-- 1 mark mark     22296 Oct 11 08:55 stderr.txt
[2025-10-11 08:55:37] HITS file was successfully produced:
[2025-10-11 08:55:37] -rw------- 1 mark mark 198675590 Oct 11 08:54 shared/HITS.pool.root.1
[2025-10-11 08:55:37]  *** Contents of shared directory: ***
[2025-10-11 08:55:37] total 414372
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark 224140013 Oct 11 07:58 ATLAS.root_0
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark     15120 Oct 11 07:58 start_atlas.sh
[2025-10-11 08:55:37] -rw-r--r-- 2 mark mark    569680 Oct 11 07:58 input.tar.gz
[2025-10-11 08:55:37] -rw------- 1 mark mark 198675590 Oct 11 08:54 HITS.pool.root.1
[2025-10-11 08:55:37] -rw------- 1 mark mark    901120 Oct 11 08:55 result.tar.gz
08:55:39 (2151824): run_atlas exited; CPU time 35939.526659
08:55:39 (2151824): called boinc_finish(0)

</stderr_txt>
]]>

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