Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:23:34 (3820923): wrapper (7.7.26015): starting
03:23:34 (3820923): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 03:23:34] Arguments: --nthreads 8
[2025-10-11 03:23:34] Threads: 8
[2025-10-11 03:23:34] Checking for CVMFS
[2025-10-11 03:23:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:23:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:23:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:23:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:23:34] 2.13.2.0 4298 22605 223708 151576 0 65 22308678 32935936 4331 16776704 0 64439985 99.702 51522217 29853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 03:23:34] CVMFS is ok
[2025-10-11 03:23:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:23:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:23:34] Further information can be found at the LHC@home message board.
[2025-10-11 03:23:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:23:34] Checking for apptainer binary...
[2025-10-11 03:23:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:23:34] Running /usr/bin/apptainer --version
[2025-10-11 03:23:35] apptainer version 1.4.3-1.el9
[2025-10-11 03:23:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:23:35] c-8-24.aglt2.org
[2025-10-11 03:23:35] apptainer works
[2025-10-11 03:23:35] Set ATHENA_PROC_NUMBER=8
[2025-10-11 03:23:35] Set ATHENA_CORE_NUMBER=8
[2025-10-11 03:23:35] Starting ATLAS job with PandaID=6837828526
[2025-10-11 03:23:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:01:25]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:01:25]  mtime=0
[2025-10-11 05:01:25]  protocol_id=None
[2025-10-11 05:01:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 05:01:25]  replicas=None
[2025-10-11 05:01:25]  scope=mc23_13p6TeV
[2025-10-11 05:01:25]  status=None
[2025-10-11 05:01:25]  status_code=0
[2025-10-11 05:01:25]  storage_token=
[2025-10-11 05:01:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837828526/log.46676269._045987.job.log.tgz.1
[2025-10-11 05:01:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/9f/log.46676269._045987.job.log.tgz.1
[2025-10-11 05:01:25]  workdir=None
[2025-10-11 05:01:25] ]
[2025-10-11 05:01:25] 2025-10-11 09:00:45,474 | INFO     | transferring file log.46676269._045987.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837828526/log.46676269._045987.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 05:01:25] 2025-10-11 09:00:45,474 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837828526/log.46676269._045987.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._045987.job
[2025-10-11 05:01:25] 2025-10-11 09:00:45,490 | INFO     | adding to output.list: log.46676269._045987.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/9f/log.46676269._045987.job.log.tg
[2025-10-11 05:01:25] 2025-10-11 09:00:45,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 05:01:25] 2025-10-11 09:00:45,491 | INFO     | summary of transferred files:
[2025-10-11 05:01:25] 2025-10-11 09:00:45,491 | INFO     |  -- lfn=log.46676269._045987.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 05:01:25] 2025-10-11 09:00:45,492 | INFO     | stage-out finished correctly
[2025-10-11 05:01:25] 2025-10-11 09:00:45,597 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 05:01:25] 2025-10-11 09:00:47,244 | INFO     | monitor loop #431: job 0:6837828526 is in state 'finished'
[2025-10-11 05:01:25] 2025-10-11 09:00:47,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 05:01:25] 2025-10-11 09:00:47,401 | INFO     | time since job start (5822s) is within the limit (172800.0s)
[2025-10-11 05:01:25] 2025-10-11 09:00:48,254 | INFO     | job 6837828526 has state=finished
[2025-10-11 05:01:25] 2025-10-11 09:00:48,254 | INFO     | preparing for final server update for job 6837828526 in state='finished'
[2025-10-11 05:01:25] 2025-10-11 09:00:48,255 | INFO     | this job has now completed (state=finished)
[2025-10-11 05:01:25] 2025-10-11 09:00:48,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 05:01:25] 2025-10-11 09:00:48,255 | INFO     | log transfer has been attempted: DONE
[2025-10-11 05:01:25] 2025-10-11 09:00:48,255 | INFO     | job 6837828526 has finished - writing final server update
[2025-10-11 05:01:25] 2025-10-11 09:00:48,256 | INFO     | total number of processed events: 400 (read)
[2025-10-11 05:01:25] 2025-10-11 09:00:48,256 | INFO     | executing command: lscpu
[2025-10-11 05:01:25] 2025-10-11 09:00:48,305 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 05:01:25] 2025-10-11 09:00:49,406 | INFO     | time since job start (5824s) is within the limit (172800.0s)
[2025-10-11 05:01:25] 2025-10-11 09:00:49,747 | INFO     | monitor loop #432: job 0:6837828526 is in state 'finished'
[2025-10-11 05:01:25] 2025-10-11 09:00:49,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,412 | INFO     | time since job start (5826s) is within the limit (172800.0s)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,774 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 05:01:25] 2025-10-11 09:00:51,781 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2660.153724999999
[2025-10-11 05:01:25] 2025-10-11 09:00:51,788 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837828526/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,788 | INFO     | extracted standard info from prmon json
[2025-10-11 05:01:25] 2025-10-11 09:00:51,789 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:01:25] 2025-10-11 09:00:51,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:01:25] 2025-10-11 09:00:51,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:01:25] 2025-10-11 09:00:51,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:01:25] 2025-10-11 09:00:51,792 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:01:25] 2025-10-11 09:00:51,792 | INFO     | sum of square deviations: 211285822.0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | sum of deviations: -9856156770.500002
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | mean x: 1760170408.5
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | mean y: 2237644.1931818184
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | -- intersect: 82111464495.06549
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | intersect: 82111464495.06549
[2025-10-11 05:01:25] 2025-10-11 09:00:51,793 | INFO     | chi2: 0.04637593669588892
[2025-10-11 05:01:25] 2025-10-11 09:00:51,794 | INFO     | -- intersect: 82111464495.06549
[2025-10-11 05:01:25] 2025-10-11 09:00:51,794 | INFO     | current memory leak: -46.65 B/s (using 88 data points, chi2=0.05)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,794 | INFO     | could have reported an average CPU frequency of 2657 MHz (7 samples)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,794 | INFO     | ..............................
[2025-10-11 05:01:25] 2025-10-11 09:00:51,794 | INFO     | . Timing measurements:
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . get job = 0 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . initial setup = 2 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . payload setup = 5 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . stage-in = 0 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . payload execution = 5794 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . stage-out = 1 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | . log creation = 0 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,795 | INFO     | ..............................
[2025-10-11 05:01:25] 2025-10-11 09:00:51,905 | INFO     | 
[2025-10-11 05:01:25] 2025-10-11 09:00:51,905 | INFO     | job summary report
[2025-10-11 05:01:25] 2025-10-11 09:00:51,905 | INFO     | --------------------------------------------------
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | PanDA job id: 6837828526
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | task id: 46676269
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | errors: (none)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | pilot state: finished 
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | transexitcode: 0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | exeerrorcode: 0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | exeerrordiag: 
[2025-10-11 05:01:25] 2025-10-11 09:00:51,906 | INFO     | exitcode: 0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | exitmsg: OK
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | cpuconsumptiontime: 43008 s
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | nevents: 400
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | neventsw: 0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | pid: 3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | pgrp: 3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | corecount: 8
[2025-10-11 05:01:25] 2025-10-11 09:00:51,907 | INFO     | event service: False
[2025-10-11 05:01:25] 2025-10-11 09:00:51,908 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5803: 2375905, 5804: 2384959, 5811: 2385097}
[2025-10-11 05:01:25] 2025-10-11 09:00:51,908 | INFO     | --------------------------------------------------
[2025-10-11 05:01:25] 2025-10-11 09:00:51,908 | INFO     | 
[2025-10-11 05:01:25] 2025-10-11 09:00:51,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | job 6837828526 has completed (purged errors)
[2025-10-11 05:01:25] 2025-10-11 09:00:51,926 | INFO     | overall cleanup function is called
[2025-10-11 05:01:25] 2025-10-11 09:00:52,934 | INFO     | --- collectZombieJob: --- 10, [3831360]
[2025-10-11 05:01:25] 2025-10-11 09:00:52,935 | INFO     | zombie collector waiting for pid 3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:52,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:01:25] 2025-10-11 09:00:52,935 | INFO     | collected zombie processes
[2025-10-11 05:01:25] 2025-10-11 09:00:52,935 | INFO     | will attempt to kill all subprocesses of pid=3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:53,196 | INFO     | process IDs to be killed: [3831360] (in reverse order)
[2025-10-11 05:01:25] 2025-10-11 09:00:53,266 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:01:25] 2025-10-11 09:00:53,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:01:25] 2025-10-11 09:00:53,275 | INFO     | did not find any defunct processes belonging to 3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:53,283 | INFO     | did not find any defunct processes belonging to 3831360
[2025-10-11 05:01:25] 2025-10-11 09:00:53,283 | INFO     | ready for new job
[2025-10-11 05:01:25] 2025-10-11 09:00:53,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:01:25] 2025-10-11 09:00:53,285 | INFO     | ***************************************
[2025-10-11 05:01:25] 2025-10-11 09:00:53,285 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:01:25] 2025-10-11 09:00:53,285 | INFO     | ***************************************
[2025-10-11 05:01:25] 2025-10-11 09:00:53,285 | INFO     | 
[2025-10-11 05:01:25] 2025-10-11 09:00:53,298 | INFO     | architecture information:
[2025-10-11 05:01:25] 2025-10-11 09:00:53,299 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:01:25] 2025-10-11 09:00:53,310 | INFO     | cat /etc/os-release:
[2025-10-11 05:01:25] NAME="CentOS Linux"
[2025-10-11 05:01:25] VERSION="7 (Core)"
[2025-10-11 05:01:25] ID="centos"
[2025-10-11 05:01:25] ID_LIKE="rhel fedora"
[2025-10-11 05:01:25] VERSION_ID="7"
[2025-10-11 05:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:01:25] ANSI_COLOR="0;31"
[2025-10-11 05:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:01:25] HOME_URL="https://www.centos.org/"
[2025-10-11 05:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:01:25] 
[2025-10-11 05:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:01:25] 
[2025-10-11 05:01:25] 2025-10-11 09:00:53,311 | INFO     | ***************************************
[2025-10-11 05:01:25] 2025-10-11 09:00:53,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 05:01:25] 2025-10-11 09:00:53,832 | INFO     | sufficient remaining disk space (74283220992 B)
[2025-10-11 05:01:25] 2025-10-11 09:00:53,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | INFO     | update_server=False
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:01:25] 2025-10-11 09:00:53,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:01:25] 2025-10-11 09:00:53,834 | INFO     | aborting loop
[2025-10-11 05:01:25] 2025-10-11 09:00:53,914 | INFO     | all data control threads have been joined
[2025-10-11 05:01:25] 2025-10-11 09:00:54,285 | INFO     | all job control threads have been joined
[2025-10-11 05:01:25] 2025-10-11 09:00:54,686 | INFO     | all payload control threads have been joined
[2025-10-11 05:01:25] 2025-10-11 09:00:54,838 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:54,838 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:01:25] 2025-10-11 09:00:54,839 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:54,839 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:54,919 | INFO     | [data] control thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:54,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,229 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,239 | INFO     | [job] validate thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,289 | INFO     | [job] control thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,550 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,664 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,691 | INFO     | [payload] control thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:55,839 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:56,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:01:25] 2025-10-11 09:00:56,217 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:56,285 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:00:56,355 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:01:00,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:01:25] 2025-10-11 09:01:00,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829047953216)>', '<ExcThread(monitor, started 139828414895872)>']
[2025-10-11 05:01:25] 2025-10-11 09:01:05,334 | INFO     | all workflow threads have been joined
[2025-10-11 05:01:25] 2025-10-11 09:01:05,334 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:01:25] 2025-10-11 09:01:05,334 | INFO     | traces error code: 0
[2025-10-11 05:01:25] 2025-10-11 09:01:05,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:01:25] 2025-10-11 09:01:24,854 | INFO     | PID=3824577 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:01:25] 2025-10-11 09:01:24,855 | INFO     | .. there are 6 such processes running
[2025-10-11 05:01:25] 2025-10-11 09:01:24,855 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:01:25] 2025-10-11 09:01:24,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:01:25] 2025-10-11 09:01:24,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:01:25] 2025-10-11 09:01:24,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:01:25] 2025-10-11 09:01:24,856 | INFO     | [monitor] control thread has ended
[2025-10-11 05:01:25] 2025-10-11 09:01:24,957 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:01:25] 2025-10-11 09:01:24,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:01:25] 2025-10-11 09:01:24,962 [wrapper] pilotpid: 3824577
[2025-10-11 05:01:25] 2025-10-11 09:01:24,964 [wrapper] Pilot exit status: 0
[2025-10-11 05:01:25] 2025-10-11 09:01:24,974 [wrapper] pandaids: 6837828526
[2025-10-11 05:01:25] 2025-10-11 09:01:25,022 [wrapper] cleanup supervisor_pilot 4048305 3824578
[2025-10-11 05:01:25] 2025-10-11 09:01:25,024 [wrapper] Test setup, not cleaning
[2025-10-11 05:01:25] 2025-10-11 09:01:25,027 [wrapper] apfmon messages muted
[2025-10-11 05:01:25] 2025-10-11 09:01:25,030 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:01:25] 2025-10-11 09:01:25,032 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:01:25]  *** Error codes and diagnostics ***
[2025-10-11 05:01:25]     "exeErrorCode": 0,
[2025-10-11 05:01:25]     "exeErrorDiag": "",
[2025-10-11 05:01:25]     "pilotErrorCode": 0,
[2025-10-11 05:01:25]     "pilotErrorDiag": "",
[2025-10-11 05:01:25]  *** Listing of results directory ***
[2025-10-11 05:01:25] total 412008
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 17:48 queuedata.json
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 05:01:25] -rwx------. 1 boincer umatlas     36292 Oct 10 17:56 runpilot2-wrapper.sh
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas       100 Oct 11 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:01:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 03:23 run_atlas
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas       105 Oct 11 03:23 job.xml
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas 223337170 Oct 11 03:23 EVNT.46676267._001859.pool.root.1
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 03:23 start_atlas.sh
[2025-10-11 05:01:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 03:23 shared
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 03:23 input.tar.gz
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas         0 Oct 11 03:23 boinc_lockfile
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 03:23 pandaJob.out
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas    975525 Oct 11 03:23 agis_schedconf.cvmfs.json
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas   1560580 Oct 11 03:23 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:01:25] drwx------. 5 boincer umatlas      4096 Oct 11 03:23 pilot3
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 04:55 init_data.xml
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas 192286464 Oct 11 05:00 HITS.46676269._045987.pool.root.1
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas       529 Oct 11 05:00 boinc_task_state.xml
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas        95 Oct 11 05:00 pilot_heartbeat.json
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas      1034 Oct 11 05:00 memory_monitor_summary.json
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas    339458 Oct 11 05:00 log.46676269._045987.job.log.tgz.1
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas      7810 Oct 11 05:00 heartbeat.json
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas        27 Oct 11 05:01 wrapper_checkpoint.txt
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 05:01 boinc_mmap_file
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas       822 Oct 11 05:01 pilotlog.txt
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas    849798 Oct 11 05:01 log.46676269._045987.job.log.1
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas       357 Oct 11 05:01 output.list
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas       620 Oct 11 05:01 runtime_log
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas   1208320 Oct 11 05:01 result.tar.gz
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 05:01 runtime_log.err
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas       649 Oct 11 05:01 KHAMDmjHaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqYeNDmOfZPjm.diag
[2025-10-11 05:01:25] -rw-r--r--. 1 boincer umatlas     21677 Oct 11 05:01 stderr.txt
[2025-10-11 05:01:25] HITS file was successfully produced:
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas 192286464 Oct 11 05:00 shared/HITS.pool.root.1
[2025-10-11 05:01:25]  *** Contents of shared directory: ***
[2025-10-11 05:01:25] total 407644
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas 223337170 Oct 11 03:23 ATLAS.root_0
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 03:23 start_atlas.sh
[2025-10-11 05:01:25] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 03:23 input.tar.gz
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas 192286464 Oct 11 05:00 HITS.pool.root.1
[2025-10-11 05:01:25] -rw-------. 1 boincer umatlas   1208320 Oct 11 05:01 result.tar.gz
05:01:26 (3820923): run_atlas exited; CPU time 43152.245195
05:01:26 (3820923): called boinc_finish(0)

</stderr_txt>
]]>

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