Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:15:12 (1283): wrapper (7.7.26015): starting
03:15:12 (1283): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 03:15:12] Arguments: --nthreads 12
[2025-10-11 03:15:12] Threads: 12
[2025-10-11 03:15:12] Checking for CVMFS
[2025-10-11 03:15:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:15:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:15:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:15:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:15:12] 2.11.2.0 2991 221082 98532 151576 3 1 12690393 20275201 1 130560 1 107416332 99.983 13396939 12434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 03:15:12] CVMFS is ok
[2025-10-11 03:15:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:15:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:15:12] Further information can be found at the LHC@home message board.
[2025-10-11 03:15:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:15:12] Checking for apptainer binary...
[2025-10-11 03:15:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:15:12] Running /usr/bin/apptainer --version
[2025-10-11 03:15:12] apptainer version 1.3.2-1.el7
[2025-10-11 03:15:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:15:14] c-205-32.aglt2.org
[2025-10-11 03:15:14] apptainer works
[2025-10-11 03:15:14] Set ATHENA_PROC_NUMBER=12
[2025-10-11 03:15:14] Set ATHENA_CORE_NUMBER=12
[2025-10-11 03:15:14] Starting ATLAS job with PandaID=6837828516
[2025-10-11 03:15:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 04:24:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 04:24:48]  protocol_id=None
[2025-10-11 04:24:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 04:24:48]  replicas=None
[2025-10-11 04:24:48]  scope=mc23_13p6TeV
[2025-10-11 04:24:48]  status=None
[2025-10-11 04:24:48]  status_code=0
[2025-10-11 04:24:48]  storage_token=
[2025-10-11 04:24:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837828516/log.46676269._045977.job.log.tgz.1
[2025-10-11 04:24:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/cb/log.46676269._045977.job.log.tgz.1
[2025-10-11 04:24:48]  workdir=None
[2025-10-11 04:24:48] ]
[2025-10-11 04:24:48] 2025-10-11 08:24:09,542 | INFO     | transferring file log.46676269._045977.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837828516/log.46676269._045977.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 04:24:48] 2025-10-11 08:24:09,542 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837828516/log.46676269._045977.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._045977.job
[2025-10-11 04:24:48] 2025-10-11 08:24:09,564 | INFO     | adding to output.list: log.46676269._045977.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/cb/log.46676269._045977.job.log.tg
[2025-10-11 04:24:48] 2025-10-11 08:24:09,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 04:24:48] 2025-10-11 08:24:09,565 | INFO     | summary of transferred files:
[2025-10-11 04:24:48] 2025-10-11 08:24:09,565 | INFO     |  -- lfn=log.46676269._045977.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 04:24:48] 2025-10-11 08:24:09,565 | INFO     | stage-out finished correctly
[2025-10-11 04:24:48] 2025-10-11 08:24:09,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 04:24:48] 2025-10-11 08:24:10,439 | INFO     | monitor loop #306: job 0:6837828516 is in state 'finished'
[2025-10-11 04:24:48] 2025-10-11 08:24:10,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 04:24:48] 2025-10-11 08:24:10,787 | INFO     | time since job start (4121s) is within the limit (172800.0s)
[2025-10-11 04:24:48] 2025-10-11 08:24:10,823 | INFO     | job 6837828516 has state=finished
[2025-10-11 04:24:48] 2025-10-11 08:24:10,823 | INFO     | preparing for final server update for job 6837828516 in state='finished'
[2025-10-11 04:24:48] 2025-10-11 08:24:10,824 | INFO     | this job has now completed (state=finished)
[2025-10-11 04:24:48] 2025-10-11 08:24:10,824 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 04:24:48] 2025-10-11 08:24:10,824 | INFO     | log transfer has been attempted: DONE
[2025-10-11 04:24:48] 2025-10-11 08:24:10,824 | INFO     | job 6837828516 has finished - writing final server update
[2025-10-11 04:24:48] 2025-10-11 08:24:10,825 | INFO     | total number of processed events: 400 (read)
[2025-10-11 04:24:48] 2025-10-11 08:24:10,826 | INFO     | executing command: lscpu
[2025-10-11 04:24:48] 2025-10-11 08:24:10,851 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 04:24:48] 2025-10-11 08:24:12,792 | INFO     | time since job start (4123s) is within the limit (172800.0s)
[2025-10-11 04:24:48] 2025-10-11 08:24:12,942 | INFO     | monitor loop #307: job 0:6837828516 is in state 'finished'
[2025-10-11 04:24:48] 2025-10-11 08:24:12,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 04:24:48] 2025-10-11 08:24:14,794 | INFO     | time since job start (4125s) is within the limit (172800.0s)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,365 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 04:24:48] 2025-10-11 08:24:15,369 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-11 04:24:48] 2025-10-11 08:24:15,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837828516/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,371 | INFO     | extracted standard info from prmon json
[2025-10-11 04:24:48] 2025-10-11 08:24:15,371 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 04:24:48] 2025-10-11 08:24:15,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 04:24:48] 2025-10-11 08:24:15,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 04:24:48] 2025-10-11 08:24:15,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 04:24:48] 2025-10-11 08:24:15,373 | INFO     | fitting pss+swap vs Time
[2025-10-11 04:24:48] 2025-10-11 08:24:15,373 | INFO     | sum of square deviations: 66959395.0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,373 | INFO     | sum of deviations: -1855757066.9999998
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | mean x: 1760169061.5
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | mean y: 2932095.7666666666
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | -- intersect: 48785424455.40317
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | intersect: 48785424455.40317
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | chi2: 0.05000731690576465
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | -- intersect: 48785424455.40317
[2025-10-11 04:24:48] 2025-10-11 08:24:15,374 | INFO     | current memory leak: -27.71 B/s (using 60 data points, chi2=0.05)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | ..............................
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . Timing measurements:
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . get job = 0 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . initial setup = 2 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . payload setup = 6 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . stage-in = 0 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,375 | INFO     | . payload execution = 4091 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,376 | INFO     | . stage-out = 0 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,376 | INFO     | . log creation = 0 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,376 | INFO     | ..............................
[2025-10-11 04:24:48] 2025-10-11 08:24:15,459 | INFO     | 
[2025-10-11 04:24:48] 2025-10-11 08:24:15,459 | INFO     | job summary report
[2025-10-11 04:24:48] 2025-10-11 08:24:15,459 | INFO     | --------------------------------------------------
[2025-10-11 04:24:48] 2025-10-11 08:24:15,459 | INFO     | PanDA job id: 6837828516
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | task id: 46676269
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | errors: (none)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | pilot state: finished 
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | transexitcode: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,460 | INFO     | exeerrorcode: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | exeerrordiag: 
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | exitcode: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | exitmsg: OK
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | cpuconsumptiontime: 44505 s
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | nevents: 400
[2025-10-11 04:24:48] 2025-10-11 08:24:15,461 | INFO     | neventsw: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | pid: 11557
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | pgrp: 11557
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | corecount: 12
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | event service: False
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 4102: 2375045, 4103: 2375044, 4105: 2384282, 4111: 2384420}
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | --------------------------------------------------
[2025-10-11 04:24:48] 2025-10-11 08:24:15,462 | INFO     | 
[2025-10-11 04:24:48] 2025-10-11 08:24:15,463 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 04:24:48] 2025-10-11 08:24:15,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 04:24:48] 2025-10-11 08:24:15,489 | INFO     | job 6837828516 has completed (purged errors)
[2025-10-11 04:24:48] 2025-10-11 08:24:15,490 | INFO     | overall cleanup function is called
[2025-10-11 04:24:48] 2025-10-11 08:24:15,917 | INFO     | PID=5140 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 04:24:48] 2025-10-11 08:24:16,498 | INFO     | --- collectZombieJob: --- 10, [11557]
[2025-10-11 04:24:48] 2025-10-11 08:24:16,498 | INFO     | zombie collector waiting for pid 11557
[2025-10-11 04:24:48] 2025-10-11 08:24:16,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 04:24:48] 2025-10-11 08:24:16,498 | INFO     | collected zombie processes
[2025-10-11 04:24:48] 2025-10-11 08:24:16,498 | INFO     | will attempt to kill all subprocesses of pid=11557
[2025-10-11 04:24:48] 2025-10-11 08:24:16,589 | INFO     | process IDs to be killed: [11557] (in reverse order)
[2025-10-11 04:24:48] 2025-10-11 08:24:16,639 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 04:24:48] 2025-10-11 08:24:16,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 04:24:48] 2025-10-11 08:24:16,643 | INFO     | did not find any defunct processes belonging to 11557
[2025-10-11 04:24:48] 2025-10-11 08:24:16,647 | INFO     | did not find any defunct processes belonging to 11557
[2025-10-11 04:24:48] 2025-10-11 08:24:16,647 | INFO     | ready for new job
[2025-10-11 04:24:48] 2025-10-11 08:24:16,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 04:24:48] 2025-10-11 08:24:16,649 | INFO     | ***************************************
[2025-10-11 04:24:48] 2025-10-11 08:24:16,649 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 04:24:48] 2025-10-11 08:24:16,649 | INFO     | ***************************************
[2025-10-11 04:24:48] 2025-10-11 08:24:16,649 | INFO     | 
[2025-10-11 04:24:48] 2025-10-11 08:24:16,649 | INFO     | architecture information:
[2025-10-11 04:24:48] 2025-10-11 08:24:16,650 | INFO     | executing command: cat /etc/os-release
[2025-10-11 04:24:48] 2025-10-11 08:24:16,664 | INFO     | cat /etc/os-release:
[2025-10-11 04:24:48] NAME="CentOS Linux"
[2025-10-11 04:24:48] VERSION="7 (Core)"
[2025-10-11 04:24:48] ID="centos"
[2025-10-11 04:24:48] ID_LIKE="rhel fedora"
[2025-10-11 04:24:48] VERSION_ID="7"
[2025-10-11 04:24:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 04:24:48] ANSI_COLOR="0;31"
[2025-10-11 04:24:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 04:24:48] HOME_URL="https://www.centos.org/"
[2025-10-11 04:24:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 04:24:48] 
[2025-10-11 04:24:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 04:24:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 04:24:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 04:24:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 04:24:48] 
[2025-10-11 04:24:48] 2025-10-11 08:24:16,664 | INFO     | ***************************************
[2025-10-11 04:24:48] 2025-10-11 08:24:17,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 04:24:48] 2025-10-11 08:24:17,183 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-10-11 04:24:48] 2025-10-11 08:24:17,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 04:24:48] 2025-10-11 08:24:17,184 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 04:24:48] 2025-10-11 08:24:17,184 | INFO     | update_server=False
[2025-10-11 04:24:48] 2025-10-11 08:24:17,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 04:24:48] 2025-10-11 08:24:17,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:24:48] 2025-10-11 08:24:17,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:24:48] 2025-10-11 08:24:17,185 | INFO     | aborting loop
[2025-10-11 04:24:48] 2025-10-11 08:24:17,323 | INFO     | all payload control threads have been joined
[2025-10-11 04:24:48] 2025-10-11 08:24:17,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 04:24:48] 2025-10-11 08:24:18,076 | INFO     | all data control threads have been joined
[2025-10-11 04:24:48] 2025-10-11 08:24:18,189 | INFO     | [job] retrieve thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,190 | INFO     | [job] queue monitor thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,191 | INFO     | [job] job monitor thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,313 | INFO     | [payload] validate_post thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,329 | INFO     | [payload] control thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,606 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:18,682 | INFO     | all job control threads have been joined
[2025-10-11 04:24:48] 2025-10-11 08:24:18,966 | INFO     | [job] validate thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,082 | INFO     | [data] control thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,211 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,299 | INFO     | [payload] failed_post thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,563 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,639 | INFO     | [data] copytool_in thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,663 | INFO     | [data] copytool_out thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:19,687 | INFO     | [job] control thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:20,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 04:24:48] 2025-10-11 08:24:24,245 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:27,570 | INFO     | job.realtimelogging is not enabled
[2025-10-11 04:24:48] 2025-10-11 08:24:28,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 04:24:48] 2025-10-11 08:24:35,245 | INFO     | [monitor] cgroup control has ended
[2025-10-11 04:24:48] 2025-10-11 08:24:35,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876838647616)>', '<ExcThread(monitor, started 139876263515904)>']
[2025-10-11 04:24:48] 2025-10-11 08:24:40,631 | INFO     | all workflow threads have been joined
[2025-10-11 04:24:48] 2025-10-11 08:24:40,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 04:24:48] 2025-10-11 08:24:40,632 | INFO     | traces error code: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:40,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 04:24:48] 2025-10-11 08:24:48,112 | INFO     | PID=5140 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 04:24:48] 2025-10-11 08:24:48,112 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 04:24:48] 2025-10-11 08:24:48,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 04:24:48] 2025-10-11 08:24:48,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 04:24:48] 2025-10-11 08:24:48,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 04:24:48] 2025-10-11 08:24:48,113 | INFO     | [monitor] control thread has ended
[2025-10-11 04:24:48] 2025-10-11 08:24:48,194 [wrapper] ==== pilot stdout END ====
[2025-10-11 04:24:48] 2025-10-11 08:24:48,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 04:24:48] 2025-10-11 08:24:48,201 [wrapper] pilotpid: 5140
[2025-10-11 04:24:48] 2025-10-11 08:24:48,205 [wrapper] Pilot exit status: 0
[2025-10-11 04:24:48] 2025-10-11 08:24:48,219 [wrapper] pandaids: 6837828516
[2025-10-11 04:24:48] 2025-10-11 08:24:48,261 [wrapper] cleanup supervisor_pilot 22463 5141
[2025-10-11 04:24:48] 2025-10-11 08:24:48,264 [wrapper] Test setup, not cleaning
[2025-10-11 04:24:48] 2025-10-11 08:24:48,268 [wrapper] apfmon messages muted
[2025-10-11 04:24:48] 2025-10-11 08:24:48,272 [wrapper] ==== wrapper stdout END ====
[2025-10-11 04:24:48] 2025-10-11 08:24:48,275 [wrapper] ==== wrapper stderr END ====
[2025-10-11 04:24:48]  *** Error codes and diagnostics ***
[2025-10-11 04:24:48]     "exeErrorCode": 0,
[2025-10-11 04:24:48]     "exeErrorDiag": "",
[2025-10-11 04:24:48]     "pilotErrorCode": 0,
[2025-10-11 04:24:48]     "pilotErrorDiag": "",
[2025-10-11 04:24:48]  *** Listing of results directory ***
[2025-10-11 04:24:48] total 405980
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 04:24:48] -rwx------ 1 boincer umatlas     36292 Oct 10 17:58 runpilot2-wrapper.sh
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 17:58 queuedata.json
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas       100 Oct 11 03:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 04:24:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 03:15 run_atlas
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas       105 Oct 11 03:15 job.xml
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas 219491643 Oct 11 03:15 EVNT.46676267._001858.pool.root.1
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 03:15 start_atlas.sh
[2025-10-11 04:24:48] drwxrwx--x 2 boincer umatlas      4096 Oct 11 03:15 shared
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 03:15 input.tar.gz
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas         0 Oct 11 03:15 boinc_lockfile
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 03:15 pandaJob.out
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas    975525 Oct 11 03:15 agis_schedconf.cvmfs.json
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas   1560580 Oct 11 03:15 agis_ddmendpoints.agis.ALL.json
[2025-10-11 04:24:48] drwx------ 5 boincer umatlas      4096 Oct 11 03:15 pilot3
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas      5953 Oct 11 04:21 init_data.xml
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas 190348801 Oct 11 04:23 HITS.46676269._045977.pool.root.1
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas       529 Oct 11 04:23 boinc_task_state.xml
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas      1050 Oct 11 04:24 memory_monitor_summary.json
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas    388831 Oct 11 04:24 log.46676269._045977.job.log.tgz.1
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas      7856 Oct 11 04:24 heartbeat.json
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 04:24 boinc_mmap_file
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas        27 Oct 11 04:24 wrapper_checkpoint.txt
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas        95 Oct 11 04:24 pilot_heartbeat.json
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas       744 Oct 11 04:24 pilotlog.txt
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas    603366 Oct 11 04:24 log.46676269._045977.job.log.1
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas       357 Oct 11 04:24 output.list
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas       620 Oct 11 04:24 runtime_log
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas   1013760 Oct 11 04:24 result.tar.gz
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 04:24 runtime_log.err
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas       659 Oct 11 04:24 DM3MDmgJaR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtgQMDmodvhEm.diag
[2025-10-11 04:24:48] -rw-r--r-- 1 boincer umatlas     21864 Oct 11 04:24 stderr.txt
[2025-10-11 04:24:48] HITS file was successfully produced:
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas 190348801 Oct 11 04:23 shared/HITS.pool.root.1
[2025-10-11 04:24:48]  *** Contents of shared directory: ***
[2025-10-11 04:24:48] total 401808
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas 219491643 Oct 11 03:15 ATLAS.root_0
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 03:15 start_atlas.sh
[2025-10-11 04:24:48] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 03:15 input.tar.gz
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas 190348801 Oct 11 04:23 HITS.pool.root.1
[2025-10-11 04:24:48] -rw------- 1 boincer umatlas   1013760 Oct 11 04:24 result.tar.gz
04:24:50 (1283): run_atlas exited; CPU time 44473.557145
04:24:50 (1283): called boinc_finish(0)

</stderr_txt>
]]>

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