Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:54 (3378478): wrapper (7.7.26015): starting
06:02:54 (3378478): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 06:02:54] Arguments: --nthreads 9
[2025-10-11 06:02:54] Threads: 9
[2025-10-11 06:02:54] Checking for CVMFS
[2025-10-11 06:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:02:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:02:55] 2.13.2.0 953388 84723 372524 151579 2 520 21073470 32935936 38659 16776704 0 448723386 99.716 317829398 16688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 06:02:55] CVMFS is ok
[2025-10-11 06:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:02:55] Further information can be found at the LHC@home message board.
[2025-10-11 06:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:02:55] Checking for apptainer binary...
[2025-10-11 06:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:02:55] Running /usr/bin/apptainer --version
[2025-10-11 06:02:55] apptainer version 1.4.3-1.el9
[2025-10-11 06:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:02:55] c7-2-10.aglt2.org
[2025-10-11 06:02:55] apptainer works
[2025-10-11 06:02:55] Set ATHENA_PROC_NUMBER=9
[2025-10-11 06:02:55] Set ATHENA_CORE_NUMBER=9
[2025-10-11 06:02:55] Starting ATLAS job with PandaID=6837732225
[2025-10-11 06:02:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:41:39]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:41:39] 2025-10-11 12:40:36,231 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:41:39] 2025-10-11 12:40:36,231 | INFO     | sum of square deviations: 1132558706.6233716
[2025-10-11 08:41:39] 2025-10-11 12:40:36,251 | INFO     | sum of deviations: 10062097289.01299
[2025-10-11 08:41:39] 2025-10-11 12:40:36,251 | INFO     | mean x: 1760181696.7532468
[2025-10-11 08:41:39] 2025-10-11 12:40:36,258 | INFO     | mean y: 2335265.474025974
[2025-10-11 08:41:39] 2025-10-11 12:40:36,258 | INFO     | -- intersect: -15635811680.45811
[2025-10-11 08:41:39] 2025-10-11 12:40:36,258 | INFO     | intersect: -15635811680.45811
[2025-10-11 08:41:39] 2025-10-11 12:40:36,259 | INFO     | chi2: 2.0803515151383207
[2025-10-11 08:41:39] 2025-10-11 12:40:36,259 | INFO     | sum of square deviations: 1025796414.3087271
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | sum of deviations: 19237408652.75838
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | mean x: 1760181544.2550335
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | mean y: 2348006.322147651
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | -- intersect: -33007449257.10089
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | intersect: -33007449257.10089
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | chi2: 1.2828785227423511
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | current chi2=1.2828785227423511 (change=38.333569427710216 %)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,260 | INFO     | sum of square deviations: 925964728.4930569
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | sum of deviations: 18335938381.680565
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | mean x: 1760181391.7569444
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | mean y: 2346625.8194444445
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | -- intersect: -34852736453.166405
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | intersect: -34852736453.166405
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | chi2: 1.2840002608750678
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | current chi2=1.2840002608750678 (change=-0.08743915443519668 %)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,261 | INFO     | right removable region: 143
[2025-10-11 08:41:39] 2025-10-11 12:40:36,262 | INFO     | sum of square deviations: 1025782018.7919439
[2025-10-11 08:41:39] 2025-10-11 12:40:36,279 | INFO     | sum of deviations: -10541136999.879196
[2025-10-11 08:41:39] 2025-10-11 12:40:36,279 | INFO     | mean x: 1760181849.261745
[2025-10-11 08:41:39] 2025-10-11 12:40:36,279 | INFO     | mean y: 2364304.0738255032
[2025-10-11 08:41:39] 2025-10-11 12:40:36,279 | INFO     | -- intersect: 18090337848.024277
[2025-10-11 08:41:39] 2025-10-11 12:40:36,279 | INFO     | intersect: 18090337848.024277
[2025-10-11 08:41:39] 2025-10-11 12:40:36,280 | INFO     | chi2: 0.8332008573552824
[2025-10-11 08:41:39] 2025-10-11 12:40:36,280 | INFO     | current chi2=0.8332008573552824 (change=59.949034992776994 %)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,280 | INFO     | sum of square deviations: 925935693.4375019
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | sum of deviations: -9650456703.562494
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | mean x: 1760182001.7708333
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | mean y: 2362940.4375
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | -- intersect: 18347654431.92047
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | intersect: 18347654431.92047
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | chi2: 0.833246109705527
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | current chi2=0.833246109705527 (change=-0.005431145424921992 %)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | left removable region: 20
[2025-10-11 08:41:39] 2025-10-11 12:40:36,281 | INFO     | sum of square deviations: 577048325.8699185
[2025-10-11 08:41:39] 2025-10-11 12:40:36,282 | INFO     | sum of deviations: 564387972.0569108
[2025-10-11 08:41:39] 2025-10-11 12:40:36,282 | INFO     | mean x: 1760181971.300813
[2025-10-11 08:41:39] 2025-10-11 12:40:36,282 | INFO     | mean y: 2375081.4308943087
[2025-10-11 08:41:39] 2025-10-11 12:40:36,282 | INFO     | -- intersect: -1719188761.139797
[2025-10-11 08:41:39] 2025-10-11 12:40:36,282 | INFO     | intersect: -1719188761.139797
[2025-10-11 08:41:39] 2025-10-11 12:40:36,284 | INFO     | chi2: 0.004410884800345107
[2025-10-11 08:41:39] 2025-10-11 12:40:36,284 | INFO     | -- intersect: -1719188761.139797
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | current memory leak: 0.98 B/s (using 123 data points, chi2=0.00)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | could have reported an average CPU frequency of 3123 MHz (9 samples)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | ..............................
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | . Timing measurements:
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | . get job = 0 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | . initial setup = 3 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | . payload setup = 10 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,285 | INFO     | . stage-in = 0 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,286 | INFO     | . payload execution = 9392 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,286 | INFO     | . stage-out = 1 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,286 | INFO     | . log creation = 0 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,286 | INFO     | ..............................
[2025-10-11 08:41:39] 2025-10-11 12:40:36,333 | INFO     | time since job start (9442s) is within the limit (172800.0s)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,517 | INFO     | 
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | job summary report
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | --------------------------------------------------
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | PanDA job id: 6837732225
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | task id: 46676269
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | errors: (none)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | pilot state: finished 
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | transexitcode: 0
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | exeerrorcode: 0
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | exeerrordiag: 
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | exitcode: 0
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | exitmsg: OK
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | cpuconsumptiontime: 34590 s
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | nevents: 400
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | neventsw: 0
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | pid: 3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:36,519 | INFO     | pgrp: 3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | corecount: 9
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | event service: False
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 9406: 2377467, 9407: 2377466, 9409: 2386520, 9411: 2386704, 9423: 2386962}
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | --------------------------------------------------
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | 
[2025-10-11 08:41:39] 2025-10-11 12:40:36,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 08:41:39] 2025-10-11 12:40:36,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:41:39] 2025-10-11 12:40:36,563 | INFO     | job 6837732225 has completed (purged errors)
[2025-10-11 08:41:39] 2025-10-11 12:40:36,563 | INFO     | overall cleanup function is called
[2025-10-11 08:41:39] 2025-10-11 12:40:37,600 | INFO     | --- collectZombieJob: --- 10, [3389551]
[2025-10-11 08:41:39] 2025-10-11 12:40:37,675 | INFO     | zombie collector waiting for pid 3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:37,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:41:39] 2025-10-11 12:40:37,676 | INFO     | collected zombie processes
[2025-10-11 08:41:39] 2025-10-11 12:40:37,676 | INFO     | will attempt to kill all subprocesses of pid=3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:41,025 | INFO     | PID=3382245 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 08:41:39] 2025-10-11 12:40:41,025 | INFO     | .. there are 44 such processes running
[2025-10-11 08:41:39] 2025-10-11 12:40:41,135 | INFO     | process IDs to be killed: [3389551] (in reverse order)
[2025-10-11 08:41:39] 2025-10-11 12:40:41,395 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:41:39] 2025-10-11 12:40:41,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:41:39] 2025-10-11 12:40:41,419 | INFO     | did not find any defunct processes belonging to 3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:41,441 | INFO     | did not find any defunct processes belonging to 3389551
[2025-10-11 08:41:39] 2025-10-11 12:40:41,441 | INFO     | ready for new job
[2025-10-11 08:41:39] 2025-10-11 12:40:41,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:41:39] 2025-10-11 12:40:41,442 | INFO     | ***************************************
[2025-10-11 08:41:39] 2025-10-11 12:40:41,443 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:41:39] 2025-10-11 12:40:41,443 | INFO     | ***************************************
[2025-10-11 08:41:39] 2025-10-11 12:40:41,443 | INFO     | 
[2025-10-11 08:41:39] 2025-10-11 12:40:41,465 | INFO     | architecture information:
[2025-10-11 08:41:39] 2025-10-11 12:40:41,469 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:41:39] 2025-10-11 12:40:41,546 | INFO     | cat /etc/os-release:
[2025-10-11 08:41:39] NAME="CentOS Linux"
[2025-10-11 08:41:39] VERSION="7 (Core)"
[2025-10-11 08:41:39] ID="centos"
[2025-10-11 08:41:39] ID_LIKE="rhel fedora"
[2025-10-11 08:41:39] VERSION_ID="7"
[2025-10-11 08:41:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:41:39] ANSI_COLOR="0;31"
[2025-10-11 08:41:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:41:39] HOME_URL="https://www.centos.org/"
[2025-10-11 08:41:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:41:39] 
[2025-10-11 08:41:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:41:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:41:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:41:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:41:39] 
[2025-10-11 08:41:39] 2025-10-11 12:40:41,547 | INFO     | ***************************************
[2025-10-11 08:41:39] 2025-10-11 12:40:42,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 08:41:39] 2025-10-11 12:40:42,172 | INFO     | sufficient remaining disk space (74336698368 B)
[2025-10-11 08:41:39] 2025-10-11 12:40:42,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:41:39] 2025-10-11 12:40:42,172 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:41:39] 2025-10-11 12:40:42,173 | INFO     | update_server=False
[2025-10-11 08:41:39] 2025-10-11 12:40:42,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:41:39] 2025-10-11 12:40:42,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:41:39] 2025-10-11 12:40:42,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:41:39] 2025-10-11 12:40:42,174 | INFO     | aborting loop
[2025-10-11 08:41:39] 2025-10-11 12:40:42,609 | INFO     | all data control threads have been joined
[2025-10-11 08:41:39] 2025-10-11 12:40:42,849 | INFO     | all payload control threads have been joined
[2025-10-11 08:41:39] 2025-10-11 12:40:43,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:41:39] 2025-10-11 12:40:43,179 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,193 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,214 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,376 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,528 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,606 | INFO     | all job control threads have been joined
[2025-10-11 08:41:39] 2025-10-11 12:40:43,615 | INFO     | [data] control thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,627 | INFO     | [job] validate thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,767 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,855 | INFO     | [payload] control thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:43,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:41:39] 2025-10-11 12:40:44,106 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:44,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:44,263 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:44,614 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:44,615 | INFO     | [job] control thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:45,148 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:40:47,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:41:39] 2025-10-11 12:41:14,668 | INFO     | PID=3382245 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:41:39] 2025-10-11 12:41:14,668 | INFO     | .. there are 44 such processes running
[2025-10-11 08:41:39] 2025-10-11 12:41:14,669 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:41:39] 2025-10-11 12:41:14,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:41:39] 2025-10-11 12:41:14,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:41:39] 2025-10-11 12:41:30,814 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:41:39] 2025-10-11 12:41:32,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771677398848)>', '<ExcThread(monitor, started 139771045209856)>']
[2025-10-11 08:41:39] 2025-10-11 12:41:32,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:41:39] 2025-10-11 12:41:32,778 | INFO     | [monitor] control thread has ended
[2025-10-11 08:41:39] 2025-10-11 12:41:37,727 | INFO     | all workflow threads have been joined
[2025-10-11 08:41:39] 2025-10-11 12:41:37,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:41:39] 2025-10-11 12:41:37,728 | INFO     | traces error code: 0
[2025-10-11 08:41:39] 2025-10-11 12:41:37,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:41:39] 2025-10-11 12:41:38,667 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:41:39] 2025-10-11 12:41:38,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:41:39] 2025-10-11 12:41:38,673 [wrapper] pilotpid: 3382245
[2025-10-11 08:41:39] 2025-10-11 12:41:38,675 [wrapper] Pilot exit status: 0
[2025-10-11 08:41:39] 2025-10-11 12:41:38,738 [wrapper] pandaids: 6837732225
[2025-10-11 08:41:39] 2025-10-11 12:41:38,926 [wrapper] cleanup supervisor_pilot 4126814 3382246
[2025-10-11 08:41:39] 2025-10-11 12:41:38,931 [wrapper] Test setup, not cleaning
[2025-10-11 08:41:39] 2025-10-11 12:41:38,934 [wrapper] apfmon messages muted
[2025-10-11 08:41:39] 2025-10-11 12:41:38,937 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:41:39] 2025-10-11 12:41:38,939 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:41:39]  *** Error codes and diagnostics ***
[2025-10-11 08:41:39]     "exeErrorCode": 0,
[2025-10-11 08:41:39]     "exeErrorDiag": "",
[2025-10-11 08:41:39]     "pilotErrorCode": 0,
[2025-10-11 08:41:39]     "pilotErrorDiag": "",
[2025-10-11 08:41:39]  *** Listing of results directory ***
[2025-10-11 08:41:39] total 421664
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:08 pilot3.tar.gz
[2025-10-11 08:41:39] -rwx------. 1 boincer umatlas     36292 Oct 10 16:13 runpilot2-wrapper.sh
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:13 queuedata.json
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas       100 Oct 11 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:41:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 06:02 run_atlas
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas       105 Oct 11 06:02 job.xml
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas 221150120 Oct 11 06:02 EVNT.46676267._001800.pool.root.1
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:02 start_atlas.sh
[2025-10-11 08:41:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 06:02 shared
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:02 input.tar.gz
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas         0 Oct 11 06:02 boinc_lockfile
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 06:02 pandaJob.out
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas    975525 Oct 11 06:03 agis_schedconf.cvmfs.json
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas   1560580 Oct 11 06:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:41:39] drwx------. 5 boincer umatlas      4096 Oct 11 06:03 pilot3
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas 203576260 Oct 11 08:39 HITS.46676269._044477.pool.root.1
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas      6934 Oct 11 08:39 init_data.xml
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas       529 Oct 11 08:39 boinc_task_state.xml
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas      1055 Oct 11 08:40 memory_monitor_summary.json
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas    399746 Oct 11 08:40 log.46676269._044477.job.log.tgz.1
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas        95 Oct 11 08:40 pilot_heartbeat.json
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas      7794 Oct 11 08:40 heartbeat.json
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 08:41 boinc_mmap_file
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas        27 Oct 11 08:41 wrapper_checkpoint.txt
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas      4824 Oct 11 08:41 pilotlog.txt
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas   1178355 Oct 11 08:41 log.46676269._044477.job.log.1
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas       357 Oct 11 08:41 output.list
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas       620 Oct 11 08:41 runtime_log
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas   1597440 Oct 11 08:41 result.tar.gz
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 08:41 runtime_log.err
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas       657 Oct 11 08:41 2f7MDmTfYR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4VQMDmE5EX4m.diag
[2025-10-11 08:41:39] -rw-r--r--. 1 boincer umatlas     21126 Oct 11 08:41 stderr.txt
[2025-10-11 08:41:39] HITS file was successfully produced:
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas 203576260 Oct 11 08:39 shared/HITS.pool.root.1
[2025-10-11 08:41:39]  *** Contents of shared directory: ***
[2025-10-11 08:41:39] total 416916
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas 221150120 Oct 11 06:02 ATLAS.root_0
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:02 start_atlas.sh
[2025-10-11 08:41:39] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:02 input.tar.gz
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas 203576260 Oct 11 08:39 HITS.pool.root.1
[2025-10-11 08:41:39] -rw-------. 1 boincer umatlas   1597440 Oct 11 08:41 result.tar.gz
08:41:42 (3378478): run_atlas exited; CPU time 34955.486379
08:41:42 (3378478): called boinc_finish(0)

</stderr_txt>
]]>

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