Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:18:47 (2295249): wrapper (7.7.26015): starting
08:18:47 (2295249): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 08:18:47] Arguments: --nthreads 4
[2025-10-12 08:18:47] Threads: 4
[2025-10-12 08:18:47] Checking for CVMFS
[2025-10-12 08:18:47] No cvmfs_config command found, will try listing directly
[2025-10-12 08:18:47] CVMFS is ok
[2025-10-12 08:18:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:18:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:18:47] Further information can be found at the LHC@home message board.
[2025-10-12 08:18:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:18:47] Checking for apptainer binary...
[2025-10-12 08:18:47] which: no apptainer in ((null))
[2025-10-12 08:18:47] apptainer is not installed, using version from CVMFS
[2025-10-12 08:18:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:18:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-10-12 08:18:47] apptainer works
[2025-10-12 08:18:47] Set ATHENA_PROC_NUMBER=4
[2025-10-12 08:18:47] Set ATHENA_CORE_NUMBER=4
[2025-10-12 08:18:47] Starting ATLAS job with PandaID=6838068436
[2025-10-12 08:18:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:01:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:01:36] 2025-10-12 08:59:25,867 | INFO     | time since job start (9623s) is within the limit (172800.0s)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,110 | INFO     | monitor loop #663: job 0:6838068436 is in state 'finished'
[2025-10-12 11:01:36] 2025-10-12 08:59:27,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,148 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:01:36] 2025-10-12 08:59:27,169 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2704.9565937499997
[2025-10-12 11:01:36] 2025-10-12 08:59:27,195 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6838068436/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,195 | INFO     | extracted standard info from prmon json
[2025-10-12 11:01:36] 2025-10-12 08:59:27,196 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:01:36] 2025-10-12 08:59:27,196 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:01:36] 2025-10-12 08:59:27,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:01:36] 2025-10-12 08:59:27,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:01:36] 2025-10-12 08:59:27,200 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:01:36] 2025-10-12 08:59:27,200 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,201 | INFO     | sum of deviations: 8525641698.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,201 | INFO     | mean x: 1760254735.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,201 | INFO     | mean y: 2334739.668789809
[2025-10-12 11:01:36] 2025-10-12 08:59:27,201 | INFO     | -- intersect: -12504368252.598682
[2025-10-12 11:01:36] 2025-10-12 08:59:27,201 | INFO     | intersect: -12504368252.598682
[2025-10-12 11:01:36] 2025-10-12 08:59:27,202 | INFO     | chi2: 1.2688646327610347
[2025-10-12 11:01:36] 2025-10-12 08:59:27,202 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | sum of deviations: 8484060102.5
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | mean x: 1760254582.5
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | mean y: 2334682.5197368423
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | -- intersect: -13712444831.102747
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | intersect: -13712444831.102747
[2025-10-12 11:01:36] 2025-10-12 08:59:27,203 | INFO     | chi2: 1.2700335469055808
[2025-10-12 11:01:36] 2025-10-12 08:59:27,204 | INFO     | current chi2=1.2700335469055808 (change=-0.0921228407164738 %)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,204 | INFO     | right removable region: 151
[2025-10-12 11:01:36] 2025-10-12 08:59:27,204 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,205 | INFO     | sum of deviations: -9839645077.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,205 | INFO     | mean x: 1760254887.5
[2025-10-12 11:01:36] 2025-10-12 08:59:27,205 | INFO     | mean y: 2359504.486842105
[2025-10-12 11:01:36] 2025-10-12 08:59:27,205 | INFO     | -- intersect: 15908492237.584858
[2025-10-12 11:01:36] 2025-10-12 08:59:27,205 | INFO     | intersect: 15908492237.584858
[2025-10-12 11:01:36] 2025-10-12 08:59:27,206 | INFO     | chi2: 0.011306683985393971
[2025-10-12 11:01:36] 2025-10-12 08:59:27,206 | INFO     | current chi2=0.011306683985393971 (change=99.10891329985368 %)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,206 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | sum of deviations: -9250762972.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | mean x: 1760255040.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | mean y: 2358635.231292517
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | -- intersect: 16535021891.082413
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | intersect: 16535021891.082413
[2025-10-12 11:01:36] 2025-10-12 08:59:27,207 | INFO     | chi2: 0.011012103085137497
[2025-10-12 11:01:36] 2025-10-12 08:59:27,208 | INFO     | current chi2=0.011012103085137497 (change=2.6053695374967183 %)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,208 | INFO     | left removable region: 20
[2025-10-12 11:01:36] 2025-10-12 08:59:27,208 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | sum of deviations: -7193374858.000001
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | mean x: 1760255162.0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | mean y: 2356963.3664122135
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | -- intersect: 18167604321.98637
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | intersect: 18167604321.98637
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | chi2: 0.01041685330768847
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | -- intersect: 18167604321.98637
[2025-10-12 11:01:36] 2025-10-12 08:59:27,209 | INFO     | current memory leak: -10.32 B/s (using 131 data points, chi2=0.01)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | could have reported an average CPU frequency of 2719 MHz (9 samples)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | ..............................
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | . Timing measurements:
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | . get job = 0 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | . initial setup = 1 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | . payload setup = 8 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,210 | INFO     | . stage-in = 0 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,211 | INFO     | . payload execution = 9583 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,211 | INFO     | . stage-out = 0 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,211 | INFO     | . log creation = 0 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,211 | INFO     | ..............................
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | 
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | job summary report
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | --------------------------------------------------
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | PanDA job id: 6838068436
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | task id: 46676269
[2025-10-12 11:01:36] 2025-10-12 08:59:27,317 | INFO     | errors: (none)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | pilot state: finished 
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | transexitcode: 0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | exeerrorcode: 0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | exeerrordiag: 
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | exitcode: 0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | exitmsg: OK
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | cpuconsumptiontime: 36846 s
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | nevents: 400
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | neventsw: 0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | pid: 2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:27,318 | INFO     | pgrp: 2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | corecount: 4
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | event service: False
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | sizes: {0: 2348867, 7: 2349129, 11: 2349157, 9596: 2378096, 9597: 2387118, 9598: 2387174, 9607: 2387560}
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | --------------------------------------------------
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | 
[2025-10-12 11:01:36] 2025-10-12 08:59:27,319 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-12 11:01:36] 2025-10-12 08:59:27,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | job 6838068436 has completed (purged errors)
[2025-10-12 11:01:36] 2025-10-12 08:59:27,352 | INFO     | overall cleanup function is called
[2025-10-12 11:01:36] 2025-10-12 08:59:28,361 | INFO     | --- collectZombieJob: --- 10, [2339372]
[2025-10-12 11:01:36] 2025-10-12 08:59:28,362 | INFO     | zombie collector waiting for pid 2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:28,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:01:36] 2025-10-12 08:59:28,362 | INFO     | collected zombie processes
[2025-10-12 11:01:36] 2025-10-12 08:59:28,362 | INFO     | will attempt to kill all subprocesses of pid=2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:29,070 | INFO     | process IDs to be killed: [2339372] (in reverse order)
[2025-10-12 11:01:36] 2025-10-12 08:59:29,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:01:36] 2025-10-12 08:59:29,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:01:36] 2025-10-12 08:59:29,340 | INFO     | did not find any defunct processes belonging to 2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:29,369 | INFO     | did not find any defunct processes belonging to 2339372
[2025-10-12 11:01:36] 2025-10-12 08:59:29,369 | INFO     | ready for new job
[2025-10-12 11:01:36] 2025-10-12 08:59:29,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:01:36] 2025-10-12 08:59:29,372 | INFO     | ***************************************
[2025-10-12 11:01:36] 2025-10-12 08:59:29,372 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:01:36] 2025-10-12 08:59:29,372 | INFO     | ***************************************
[2025-10-12 11:01:36] 2025-10-12 08:59:29,372 | INFO     | 
[2025-10-12 11:01:36] 2025-10-12 08:59:29,380 | INFO     | architecture information:
[2025-10-12 11:01:36] 2025-10-12 08:59:29,380 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:01:36] 2025-10-12 08:59:29,401 | INFO     | cat /etc/os-release:
[2025-10-12 11:01:36] NAME="CentOS Linux"
[2025-10-12 11:01:36] VERSION="7 (Core)"
[2025-10-12 11:01:36] ID="centos"
[2025-10-12 11:01:36] ID_LIKE="rhel fedora"
[2025-10-12 11:01:36] VERSION_ID="7"
[2025-10-12 11:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:01:36] ANSI_COLOR="0;31"
[2025-10-12 11:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:01:36] HOME_URL="https://www.centos.org/"
[2025-10-12 11:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:01:36] 
[2025-10-12 11:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:01:36] 
[2025-10-12 11:01:36] 2025-10-12 08:59:29,401 | INFO     | ***************************************
[2025-10-12 11:01:36] 2025-10-12 08:59:29,904 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-12 11:01:36] 2025-10-12 08:59:29,926 | INFO     | sufficient remaining disk space (3334933053440 B)
[2025-10-12 11:01:36] 2025-10-12 08:59:29,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:01:36] 2025-10-12 08:59:29,926 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:01:36] 2025-10-12 08:59:29,926 | INFO     | update_server=False
[2025-10-12 11:01:36] 2025-10-12 08:59:29,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:01:36] 2025-10-12 08:59:29,965 | INFO     | all job control threads have been joined
[2025-10-12 11:01:36] 2025-10-12 08:59:30,070 | INFO     | all data control threads have been joined
[2025-10-12 11:01:36] 2025-10-12 08:59:30,348 | INFO     | all payload control threads have been joined
[2025-10-12 11:01:36] 2025-10-12 08:59:30,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:01:36] 2025-10-12 08:59:30,621 | INFO     | aborting loop
[2025-10-12 11:01:36] 2025-10-12 08:59:30,932 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:30,971 | INFO     | [job] control thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,035 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,076 | INFO     | [data] control thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:01:36] 2025-10-12 08:59:31,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,354 | INFO     | [payload] control thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,625 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:31,993 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:32,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:32,161 | INFO     | [job] validate thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:32,172 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:32,184 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:32,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:01:36] 2025-10-12 08:59:32,344 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:33,293 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:33,329 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:33,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:01:36] 2025-10-12 08:59:37,388 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:01:36] 2025-10-12 08:59:59,811 | INFO     | PID=2309634 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:01:36] 2025-10-12 08:59:59,811 | INFO     | .. there are 11 such processes running
[2025-10-12 11:01:36] 2025-10-12 08:59:59,811 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:01:36] 2025-10-12 08:59:59,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:01:36] 2025-10-12 08:59:59,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:01:36] 2025-10-12 09:00:17,481 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:01:36] 2025-10-12 09:00:17,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22979820996416)>', '<ExcThread(monitor, started 22979580753664)>']
[2025-10-12 11:01:36] 2025-10-12 09:00:17,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:01:36] 2025-10-12 09:00:17,902 | INFO     | [monitor] control thread has ended
[2025-10-12 11:01:36] 2025-10-12 09:00:22,618 | INFO     | all workflow threads have been joined
[2025-10-12 11:01:36] 2025-10-12 09:00:22,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:01:36] 2025-10-12 09:00:22,619 | INFO     | traces error code: 0
[2025-10-12 11:01:36] 2025-10-12 09:00:22,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:01:36] 2025-10-12 09:00:22,762 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:01:36] 2025-10-12 09:00:22,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:01:36] 2025-10-12 09:00:22,770 [wrapper] pilotpid: 2309634
[2025-10-12 11:01:36] 2025-10-12 09:00:22,773 [wrapper] Pilot exit status: 0
[2025-10-12 11:01:36] 2025-10-12 09:00:22,788 [wrapper] pandaids: 6838068436
[2025-10-12 11:01:36] 2025-10-12 09:00:22,960 [wrapper] cleanup supervisor_pilot 2694348 2309635
[2025-10-12 11:01:36] 2025-10-12 09:00:22,964 [wrapper] Test setup, not cleaning
[2025-10-12 11:01:36] 2025-10-12 09:00:22,968 [wrapper] apfmon messages muted
[2025-10-12 11:01:36] 2025-10-12 09:00:22,972 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:01:36] 2025-10-12 09:00:22,976 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:01:36]  *** Error codes and diagnostics ***
[2025-10-12 11:01:36]     "exeErrorCode": 0,
[2025-10-12 11:01:36]     "exeErrorDiag": "",
[2025-10-12 11:01:36]     "pilotErrorCode": 0,
[2025-10-12 11:01:36]     "pilotErrorDiag": "",
[2025-10-12 11:01:36]  *** Listing of results directory ***
[2025-10-12 11:01:36] total 413832
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:13 queuedata.json
[2025-10-12 11:01:36] -rwx------ 1 boinc boinc     36292 Oct 11 06:15 runpilot2-wrapper.sh
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc       100 Oct 12 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:01:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:18 run_atlas
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc       105 Oct 12 08:18 job.xml
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc      6688 Oct 12 08:18 init_data.xml
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc 220822638 Oct 12 08:18 EVNT.46676267._002065.pool.root.1
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:18 start_atlas.sh
[2025-10-12 11:01:36] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:18 shared
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc    569682 Oct 12 08:18 input.tar.gz
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:18 boinc_lockfile
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc      2549 Oct 12 08:18 pandaJob.out
[2025-10-12 11:01:36] -rw------- 1 boinc boinc    975528 Oct 12 08:19 agis_schedconf.cvmfs.json
[2025-10-12 11:01:36] -rw------- 1 boinc boinc   1560580 Oct 12 08:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:01:36] drwx------ 5 boinc boinc      4096 Oct 12 08:19 pilot3
[2025-10-12 11:01:36] -rw------- 1 boinc boinc 195690180 Oct 12 10:58 HITS.46676269._051315.pool.root.1
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc       527 Oct 12 10:59 boinc_task_state.xml
[2025-10-12 11:01:36] -rw------- 1 boinc boinc      1024 Oct 12 10:59 memory_monitor_summary.json
[2025-10-12 11:01:36] -rw------- 1 boinc boinc    322258 Oct 12 10:59 log.46676269._051315.job.log.tgz.1
[2025-10-12 11:01:36] -rw------- 1 boinc boinc        95 Oct 12 10:59 pilot_heartbeat.json
[2025-10-12 11:01:36] -rw------- 1 boinc boinc      7782 Oct 12 10:59 heartbeat.json
[2025-10-12 11:01:36] -rw------- 1 boinc boinc      4836 Oct 12 11:00 pilotlog.txt
[2025-10-12 11:01:36] -rw------- 1 boinc boinc   1351696 Oct 12 11:00 log.46676269._051315.job.log.1
[2025-10-12 11:01:36] -rw------- 1 boinc boinc       357 Oct 12 11:00 output.list
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:00 runtime_log
[2025-10-12 11:01:36] -rw------- 1 boinc boinc   1689600 Oct 12 11:00 result.tar.gz
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc      9084 Oct 12 11:00 runtime_log.err
[2025-10-12 11:01:36] -rw------- 1 boinc boinc       662 Oct 12 11:00 VMONDmxBgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7ERMDmh2Vwkm.diag
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc        25 Oct 12 11:01 wrapper_checkpoint.txt
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:01 boinc_mmap_file
[2025-10-12 11:01:36] -rw-r--r-- 1 boinc boinc     20913 Oct 12 11:01 stderr.txt
[2025-10-12 11:01:36] HITS file was successfully produced:
[2025-10-12 11:01:36] -rw------- 1 boinc boinc 195690180 Oct 12 10:58 shared/HITS.pool.root.1
[2025-10-12 11:01:36]  *** Contents of shared directory: ***
[2025-10-12 11:01:36] total 408988
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc 220822638 Oct 12 08:18 ATLAS.root_0
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:18 start_atlas.sh
[2025-10-12 11:01:36] -rw-r--r-- 2 boinc boinc    569682 Oct 12 08:18 input.tar.gz
[2025-10-12 11:01:36] -rw------- 1 boinc boinc 195690180 Oct 12 10:58 HITS.pool.root.1
[2025-10-12 11:01:36] -rw------- 1 boinc boinc   1689600 Oct 12 11:00 result.tar.gz
11:01:37 (2295249): run_atlas exited; CPU time 37455.134494
11:01:37 (2295249): called boinc_finish(0)

</stderr_txt>
]]>

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