Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:21 (1043267): wrapper (7.7.26015): starting
23:47:21 (1043267): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 23:47:21] Arguments: --nthreads 8
[2025-10-10 23:47:21] Threads: 8
[2025-10-10 23:47:21] Checking for CVMFS
[2025-10-10 23:47:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:47:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:47:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:47:21] 2.11.3.0 2143 29664 193376 151575 2 265 44366237 45568000 12026 130560 0 180214171 99.830 94636884 21421 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 23:47:21] CVMFS is ok
[2025-10-10 23:47:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:47:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:47:21] Further information can be found at the LHC@home message board.
[2025-10-10 23:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:47:21] Checking for apptainer binary...
[2025-10-10 23:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:47:21] Running /usr/bin/apptainer --version
[2025-10-10 23:47:21] apptainer version 1.4.1-1.el9
[2025-10-10 23:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:47:21] wns0003.triumf.lcg
[2025-10-10 23:47:21] apptainer works
[2025-10-10 23:47:22] Set ATHENA_PROC_NUMBER=8
[2025-10-10 23:47:22] Set ATHENA_CORE_NUMBER=8
[2025-10-10 23:47:22] Starting ATLAS job with PandaID=6838067395
[2025-10-10 23:47:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:51:08]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | . Timing measurements:
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . get job = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . initial setup = 3 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload setup = 9 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-in = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload execution = 26 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-out = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . log creation = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067395/pilotlog.txt
[2025-10-10 23:51:08] 2025-10-11 06:50:34,861 | INFO     | time since job start (177s) is within the limit (172800.0s)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,871 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 23:51:08] - Log from pilotlog.txt -
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | found no stored workdir sizes
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | will not add max space = 0 B to job metrics
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | WARNING  | wrong length of table data, x=[1760165292.0], y=[1414.0] (must be same and length>=4)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | . Timing measurements:
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . get job = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . initial setup = 3 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload setup = 9 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-in = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload execution = 26 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-out = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . log creation = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067395/pilotlog.txt
[2025-10-10 23:51:08] 2025-10-11 06:50:34,861 | INFO     | time since job start (177s) is within the limit (172800.0s)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,872 | WARNING  | 
[2025-10-10 23:51:08] [begin log extracts]
[2025-10-10 23:51:08] - Log from pilotlog.txt -
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:51:08] 2025-10-11 06:50:34,852 | WARNING  | found no stored workdir sizes
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | will not add max space = 0 B to job metrics
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | WARNING  | wrong length of table data, x=[1760165292.0], y=[1414.0] (must be same and length>=4)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,853 | INFO     | . Timing measurements:
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . get job = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . initial setup = 3 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload setup = 9 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-in = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . payload execution = 26 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . stage-out = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | . log creation = 0 s
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | ..............................
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 23:51:08] 2025-10-11 06:50:34,854 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067395/pilotlog.txt
[2025-10-10 23:51:08] 2025-10-11 06:50:34,861 | INFO     | time since job start (177s) is within the limit (172800.0s)
[2025-10-10 23:51:08] [end log extracts]
[2025-10-10 23:51:08] 2025-10-11 06:50:34,872 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 23:51:08] 2025-10-11 06:50:34,872 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 23:51:08] 2025-10-11 06:50:35,285 | INFO     | 
[2025-10-10 23:51:08] 2025-10-11 06:50:35,285 | INFO     | job summary report
[2025-10-10 23:51:08] 2025-10-11 06:50:35,285 | INFO     | --------------------------------------------------
[2025-10-10 23:51:08] 2025-10-11 06:50:35,285 | INFO     | PanDA job id: 6838067395
[2025-10-10 23:51:08] 2025-10-11 06:50:35,285 | INFO     | task id: 46676269
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 23:48:26,492 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | pilot state: failed 
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | transexitcode: 65
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | exeerrorcode: 65
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | exitcode: 65
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | cpuconsumptiontime: 18 s
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | nevents: 0
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | neventsw: 0
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | pid: 1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | pgrp: 1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:35,286 | INFO     | corecount: 8
[2025-10-10 23:51:08] 2025-10-11 06:50:35,287 | INFO     | event service: False
[2025-10-10 23:51:08] 2025-10-11 06:50:35,287 | INFO     | sizes: {0: 2348855, 7: 2349117, 11: 2349145, 39: 2376547, 160: 2376685}
[2025-10-10 23:51:08] 2025-10-11 06:50:35,287 | INFO     | --------------------------------------------------
[2025-10-10 23:51:08] 2025-10-11 06:50:35,287 | INFO     | 
[2025-10-10 23:51:08] 2025-10-11 06:50:35,287 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:51:08] 2025-10-11 06:50:35,313 | INFO     | job 6838067395 has completed (purged errors)
[2025-10-10 23:51:08] 2025-10-11 06:50:35,313 | INFO     | overall cleanup function is called
[2025-10-10 23:51:08] 2025-10-11 06:50:36,113 | INFO     | PID=1046932 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 23:51:08] 2025-10-11 06:50:36,113 | INFO     | .. there are 19 such processes running
[2025-10-10 23:51:08] 2025-10-11 06:50:36,319 | INFO     | --- collectZombieJob: --- 10, [1053473]
[2025-10-10 23:51:08] 2025-10-11 06:50:36,319 | INFO     | zombie collector waiting for pid 1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:36,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:51:08] 2025-10-11 06:50:36,320 | INFO     | collected zombie processes
[2025-10-10 23:51:08] 2025-10-11 06:50:36,320 | INFO     | will attempt to kill all subprocesses of pid=1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:36,503 | INFO     | process IDs to be killed: [1053473] (in reverse order)
[2025-10-10 23:51:08] 2025-10-11 06:50:36,572 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:51:08] 2025-10-11 06:50:36,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:51:08] 2025-10-11 06:50:36,580 | INFO     | did not find any defunct processes belonging to 1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:36,586 | INFO     | did not find any defunct processes belonging to 1053473
[2025-10-10 23:51:08] 2025-10-11 06:50:36,586 | INFO     | ready for new job
[2025-10-10 23:51:08] 2025-10-11 06:50:36,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:51:08] 2025-10-11 06:50:36,587 | INFO     | ***************************************
[2025-10-10 23:51:08] 2025-10-11 06:50:36,587 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:51:08] 2025-10-11 06:50:36,587 | INFO     | ***************************************
[2025-10-10 23:51:08] 2025-10-11 06:50:36,587 | INFO     | 
[2025-10-10 23:51:08] 2025-10-11 06:50:36,589 | INFO     | architecture information:
[2025-10-10 23:51:08] 2025-10-11 06:50:36,589 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:51:08] 2025-10-11 06:50:36,605 | INFO     | cat /etc/os-release:
[2025-10-10 23:51:08] NAME="CentOS Linux"
[2025-10-10 23:51:08] VERSION="7 (Core)"
[2025-10-10 23:51:08] ID="centos"
[2025-10-10 23:51:08] ID_LIKE="rhel fedora"
[2025-10-10 23:51:08] VERSION_ID="7"
[2025-10-10 23:51:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:51:08] ANSI_COLOR="0;31"
[2025-10-10 23:51:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:51:08] HOME_URL="https://www.centos.org/"
[2025-10-10 23:51:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:51:08] 
[2025-10-10 23:51:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:51:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:51:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:51:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:51:08] 
[2025-10-10 23:51:08] 2025-10-11 06:50:36,605 | INFO     | ***************************************
[2025-10-10 23:51:08] 2025-10-11 06:50:37,107 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 23:51:08] 2025-10-11 06:50:37,121 | INFO     | sufficient remaining disk space (1323540938752 B)
[2025-10-10 23:51:08] 2025-10-11 06:50:37,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:51:08] 2025-10-11 06:50:37,121 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:51:08] 2025-10-11 06:50:37,121 | INFO     | update_server=False
[2025-10-10 23:51:08] 2025-10-11 06:50:37,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:51:08] 2025-10-11 06:50:37,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 23:51:08] 2025-10-11 06:50:37,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 23:51:08] 2025-10-11 06:50:37,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:51:08] 2025-10-11 06:50:37,493 | INFO     | will abort loop
[2025-10-10 23:51:08] 2025-10-11 06:50:37,511 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:51:08] 2025-10-11 06:50:37,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:51:08] 2025-10-11 06:50:37,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:51:08] 2025-10-11 06:50:37,740 | INFO     | all data control threads have been joined
[2025-10-10 23:51:08] 2025-10-11 06:50:38,127 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,177 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,290 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,453 | INFO     | all payload control threads have been joined
[2025-10-10 23:51:08] 2025-10-11 06:50:38,490 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,497 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:38,664 | INFO     | all job control threads have been joined
[2025-10-10 23:51:08] 2025-10-11 06:50:38,746 | INFO     | [data] control thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,391 | INFO     | [job] validate thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,458 | INFO     | [payload] control thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,468 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,509 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,533 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,593 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,669 | INFO     | [job] control thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:39,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:51:08] 2025-10-11 06:50:40,965 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:41,596 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:51:08] 2025-10-11 06:50:41,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662957610816)>', '<ExcThread(monitor, started 139662186239744)>']
[2025-10-10 23:51:08] 2025-10-11 06:50:46,739 | INFO     | all workflow threads have been joined
[2025-10-10 23:51:08] 2025-10-11 06:50:46,739 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:51:08] 2025-10-11 06:50:46,739 | INFO     | traces error code: 0
[2025-10-10 23:51:08] 2025-10-11 06:50:46,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:51:08] 2025-10-11 06:51:08,382 | INFO     | PID=1046932 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 23:51:08] 2025-10-11 06:51:08,383 | INFO     | .. there are 19 such processes running
[2025-10-10 23:51:08] 2025-10-11 06:51:08,384 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:51:08] 2025-10-11 06:51:08,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:51:08] 2025-10-11 06:51:08,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:51:08] 2025-10-11 06:51:08,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:51:08] 2025-10-11 06:51:08,384 | INFO     | [monitor] control thread has ended
[2025-10-10 23:51:08] 2025-10-11 06:51:08,495 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:51:08] 2025-10-11 06:51:08,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:51:08] 2025-10-11 06:51:08,502 [wrapper] pilotpid: 1046932
[2025-10-10 23:51:08] 2025-10-11 06:51:08,504 [wrapper] Pilot exit status: 0
[2025-10-10 23:51:08] 2025-10-11 06:51:08,515 [wrapper] pandaids: 6838067395
[2025-10-10 23:51:08] 2025-10-11 06:51:08,568 [wrapper] cleanup supervisor_pilot 1046938 1046933
[2025-10-10 23:51:08] 2025-10-11 06:51:08,571 [wrapper] Test setup, not cleaning
[2025-10-10 23:51:08] 2025-10-11 06:51:08,574 [wrapper] apfmon messages muted
[2025-10-10 23:51:08] 2025-10-11 06:51:08,578 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:51:08] 2025-10-11 06:51:08,583 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:51:08]  *** Error codes and diagnostics ***
[2025-10-10 23:51:08]     "exeErrorCode": 65,
[2025-10-10 23:51:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 23:51:08]     "pilotErrorCode": 1305,
[2025-10-10 23:51:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 23:51:08]  *** Listing of results directory ***
[2025-10-10 23:51:08] total 218060
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc    557409 Oct 10 20:42 pilot3.tar.gz
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc      5112 Oct 10 21:13 queuedata.json
[2025-10-10 23:51:08] -rwx------. 1 boinc boinc     36292 Oct 10 21:13 runpilot2-wrapper.sh
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc       100 Oct 10 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:51:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 23:47 run_atlas
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc       105 Oct 10 23:47 job.xml
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc 219181494 Oct 10 23:47 EVNT.46676267._002055.pool.root.1
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc      6443 Oct 10 23:47 init_data.xml
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc     15120 Oct 10 23:47 start_atlas.sh
[2025-10-10 23:51:08] drwxrwx--x. 2 boinc boinc      4096 Oct 10 23:47 shared
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc    569685 Oct 10 23:47 input.tar.gz
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc         0 Oct 10 23:47 boinc_lockfile
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc      2551 Oct 10 23:47 pandaJob.out
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc    975525 Oct 10 23:47 agis_schedconf.cvmfs.json
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc   1560580 Oct 10 23:47 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:51:08] drwx------. 5 boinc boinc      4096 Oct 10 23:47 pilot3
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc       957 Oct 10 23:48 memory_monitor_summary.json
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc     20955 Oct 10 23:48 log.46676269._051083.job.log.tgz.1
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc       522 Oct 10 23:48 boinc_task_state.xml
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc      8353 Oct 10 23:50 heartbeat.json
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc        22 Oct 10 23:51 wrapper_checkpoint.txt
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc      8192 Oct 10 23:51 boinc_mmap_file
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc        95 Oct 10 23:51 pilot_heartbeat.json
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc       823 Oct 10 23:51 pilotlog.txt
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc     84113 Oct 10 23:51 log.46676269._051083.job.log.1
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc       188 Oct 10 23:51 output.list
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc       620 Oct 10 23:51 runtime_log
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc    122880 Oct 10 23:51 result.tar.gz
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc      8526 Oct 10 23:51 runtime_log.err
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc       645 Oct 10 23:51 HmONDmFAgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYCRMDma4cTRo.diag
[2025-10-10 23:51:08] -rw-r--r--. 1 boinc boinc     21727 Oct 10 23:51 stderr.txt
[2025-10-10 23:51:08] No HITS result produced
[2025-10-10 23:51:08]  *** Contents of shared directory: ***
[2025-10-10 23:51:08] total 214748
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc 219181494 Oct 10 23:47 ATLAS.root_0
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc     15120 Oct 10 23:47 start_atlas.sh
[2025-10-10 23:51:08] -rw-r--r--. 2 boinc boinc    569685 Oct 10 23:47 input.tar.gz
[2025-10-10 23:51:08] -rw-------. 1 boinc boinc    122880 Oct 10 23:51 result.tar.gz
23:51:10 (1043267): run_atlas exited; CPU time 24.733633
23:51:10 (1043267): called boinc_finish(0)

</stderr_txt>
]]>

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