Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:55:17 (1529688): wrapper (7.7.26015): starting
23:55:17 (1529688): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 23:55:17] Arguments: --nthreads 12
[2025-10-10 23:55:17] Threads: 12
[2025-10-10 23:55:17] Checking for CVMFS
[2025-10-10 23:55:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:55:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:55:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:55:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:55:18] 2.11.5.0 2129 30404 253660 151575 3 518 32302218 45568001 15084 130560 0 300753963 99.835 146143782 25167 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 23:55:18] CVMFS is ok
[2025-10-10 23:55:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:55:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:55:18] Further information can be found at the LHC@home message board.
[2025-10-10 23:55:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:55:18] Checking for apptainer binary...
[2025-10-10 23:55:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:55:18] Running /usr/bin/apptainer --version
[2025-10-10 23:55:18] apptainer version 1.4.1-1.el9
[2025-10-10 23:55:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:55:19] wns0037.triumf.lcg
[2025-10-10 23:55:19] apptainer works
[2025-10-10 23:55:19] Set ATHENA_PROC_NUMBER=12
[2025-10-10 23:55:19] Set ATHENA_CORE_NUMBER=12
[2025-10-10 23:55:19] Starting ATLAS job with PandaID=6838067411
[2025-10-10 23:55:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 00:00:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | WARNING  | wrong length of table data, x=[1760165804.0], y=[848.0] (must be same and length>=4)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | could have reported an average CPU frequency of 2577 MHz (4 samples)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . Timing measurements:
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . get job = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . initial setup = 3 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . payload setup = 17 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-in = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . payload execution = 44 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-out = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . log creation = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 00:00:07] 2025-10-11 06:59:34,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067411/pilotlog.txt
[2025-10-11 00:00:07] 2025-10-11 06:59:34,199 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 00:00:07] - Log from pilotlog.txt -
[2025-10-11 00:00:07] 2025-10-11 06:59:34,099 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838067411/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | INFO     | extracted standard info from prmon json
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | WARNING  | wrong length of table data, x=[1760165804.0], y=[848.0] (must be same and length>=4)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | could have reported an average CPU frequency of 2577 MHz (4 samples)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . Timing measurements:
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . get job = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . initial setup = 3 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . payload setup = 17 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-in = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . payload execution = 44 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-out = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . log creation = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 00:00:07] 2025-10-11 06:59:34,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067411/pilotlog.txt
[2025-10-11 00:00:07] 2025-10-11 06:59:34,200 | WARNING  | 
[2025-10-11 00:00:07] [begin log extracts]
[2025-10-11 00:00:07] - Log from pilotlog.txt -
[2025-10-11 00:00:07] 2025-10-11 06:59:34,099 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838067411/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | INFO     | extracted standard info from prmon json
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:00:07] 2025-10-11 06:59:34,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | WARNING  | wrong length of table data, x=[1760165804.0], y=[848.0] (must be same and length>=4)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | could have reported an average CPU frequency of 2577 MHz (4 samples)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . Timing measurements:
[2025-10-11 00:00:07] 2025-10-11 06:59:34,101 | INFO     | . get job = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . initial setup = 3 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,102 | INFO     | . payload setup = 17 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-in = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . payload execution = 44 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . stage-out = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | . log creation = 0 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | ..............................
[2025-10-11 00:00:07] 2025-10-11 06:59:34,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 00:00:07] 2025-10-11 06:59:34,129 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838067411/pilotlog.txt
[2025-10-11 00:00:07] [end log extracts]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,200 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,201 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | 
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | job summary report
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | --------------------------------------------------
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | PanDA job id: 6838067411
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | task id: 46676269
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 23:57:09,304 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | pilot state: failed 
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | transexitcode: 65
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | exeerrorcode: 65
[2025-10-11 00:00:07] 2025-10-11 06:59:34,415 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | exitcode: 65
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | nevents: 0
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | neventsw: 0
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | pid: 1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | pgrp: 1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | corecount: 12
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | event service: False
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | sizes: {0: 2348855, 11: 2348855, 14: 2349145, 22: 2349173, 64: 2372431, 65: 2372435, 66: 2376911, 201: 2377049}
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | --------------------------------------------------
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | 
[2025-10-11 00:00:07] 2025-10-11 06:59:34,416 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 00:00:07] 2025-10-11 06:59:34,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | job 6838067411 has completed (purged errors)
[2025-10-11 00:00:07] 2025-10-11 06:59:34,486 | INFO     | overall cleanup function is called
[2025-10-11 00:00:07] 2025-10-11 06:59:35,493 | INFO     | --- collectZombieJob: --- 10, [1561652]
[2025-10-11 00:00:07] 2025-10-11 06:59:35,493 | INFO     | zombie collector waiting for pid 1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:35,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 00:00:07] 2025-10-11 06:59:35,493 | INFO     | collected zombie processes
[2025-10-11 00:00:07] 2025-10-11 06:59:35,493 | INFO     | will attempt to kill all subprocesses of pid=1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:35,999 | INFO     | process IDs to be killed: [1561652] (in reverse order)
[2025-10-11 00:00:07] 2025-10-11 06:59:36,099 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 00:00:07] 2025-10-11 06:59:36,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 00:00:07] 2025-10-11 06:59:36,140 | INFO     | did not find any defunct processes belonging to 1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:36,158 | INFO     | did not find any defunct processes belonging to 1561652
[2025-10-11 00:00:07] 2025-10-11 06:59:36,158 | INFO     | ready for new job
[2025-10-11 00:00:07] 2025-10-11 06:59:36,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 00:00:07] 2025-10-11 06:59:36,160 | INFO     | ***************************************
[2025-10-11 00:00:07] 2025-10-11 06:59:36,165 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 00:00:07] 2025-10-11 06:59:36,165 | INFO     | ***************************************
[2025-10-11 00:00:07] 2025-10-11 06:59:36,165 | INFO     | 
[2025-10-11 00:00:07] 2025-10-11 06:59:36,167 | INFO     | architecture information:
[2025-10-11 00:00:07] 2025-10-11 06:59:36,176 | INFO     | executing command: cat /etc/os-release
[2025-10-11 00:00:07] 2025-10-11 06:59:36,290 | INFO     | cat /etc/os-release:
[2025-10-11 00:00:07] NAME="CentOS Linux"
[2025-10-11 00:00:07] VERSION="7 (Core)"
[2025-10-11 00:00:07] ID="centos"
[2025-10-11 00:00:07] ID_LIKE="rhel fedora"
[2025-10-11 00:00:07] VERSION_ID="7"
[2025-10-11 00:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 00:00:07] ANSI_COLOR="0;31"
[2025-10-11 00:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 00:00:07] HOME_URL="https://www.centos.org/"
[2025-10-11 00:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 00:00:07] 
[2025-10-11 00:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 00:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 00:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 00:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 00:00:07] 
[2025-10-11 00:00:07] 2025-10-11 06:59:36,290 | INFO     | ***************************************
[2025-10-11 00:00:07] 2025-10-11 06:59:36,794 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 00:00:07] 2025-10-11 06:59:37,001 | INFO     | sufficient remaining disk space (1934491648000 B)
[2025-10-11 00:00:07] 2025-10-11 06:59:37,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 00:00:07] 2025-10-11 06:59:37,002 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 00:00:07] 2025-10-11 06:59:37,002 | INFO     | update_server=False
[2025-10-11 00:00:07] 2025-10-11 06:59:37,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 00:00:07] 2025-10-11 06:59:37,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 00:00:07] 2025-10-11 06:59:37,310 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 00:00:07] 2025-10-11 06:59:37,310 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 00:00:07] 2025-10-11 06:59:37,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:00:07] 2025-10-11 06:59:37,310 | INFO     | will abort loop
[2025-10-11 00:00:07] 2025-10-11 06:59:37,344 | INFO     | [monitor] cgroup control has ended
[2025-10-11 00:00:07] 2025-10-11 06:59:37,426 | INFO     | all data control threads have been joined
[2025-10-11 00:00:07] 2025-10-11 06:59:37,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 00:00:07] 2025-10-11 06:59:37,809 | INFO     | all job control threads have been joined
[2025-10-11 00:00:07] 2025-10-11 06:59:38,008 | INFO     | [job] retrieve thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,191 | INFO     | [job] validate thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,317 | INFO     | [job] job monitor thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,413 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,436 | INFO     | [data] control thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,446 | INFO     | all payload control threads have been joined
[2025-10-11 00:00:07] 2025-10-11 06:59:38,536 | INFO     | [payload] failed_post thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,602 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,815 | INFO     | [job] control thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,854 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:38,860 | INFO     | [data] copytool_in thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:39,179 | INFO     | [payload] validate_post thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:39,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:00:07] 2025-10-11 06:59:39,452 | INFO     | [payload] control thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:39,517 | INFO     | [data] copytool_out thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:40,434 | INFO     | [job] queue monitor thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:41,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 00:00:07] 2025-10-11 06:59:42,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195403679552)>', '<ExcThread(monitor, started 140194552465152)>']
[2025-10-11 00:00:07] 2025-10-11 06:59:47,698 | INFO     | all workflow threads have been joined
[2025-10-11 00:00:07] 2025-10-11 06:59:47,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 00:00:07] 2025-10-11 06:59:47,698 | INFO     | traces error code: 0
[2025-10-11 00:00:07] 2025-10-11 06:59:47,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 00:00:07] 2025-10-11 07:00:06,408 | INFO     | PID=1533378 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 00:00:07] 2025-10-11 07:00:06,408 | INFO     | .. there are 27 such processes running
[2025-10-11 00:00:07] 2025-10-11 07:00:06,409 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 00:00:07] 2025-10-11 07:00:06,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 00:00:07] 2025-10-11 07:00:06,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 00:00:07] 2025-10-11 07:00:06,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 00:00:07] 2025-10-11 07:00:06,409 | INFO     | [monitor] control thread has ended
[2025-10-11 00:00:07] 2025-10-11 07:00:06,929 [wrapper] ==== pilot stdout END ====
[2025-10-11 00:00:07] 2025-10-11 07:00:06,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 00:00:07] 2025-10-11 07:00:06,934 [wrapper] pilotpid: 1533378
[2025-10-11 00:00:07] 2025-10-11 07:00:06,940 [wrapper] Pilot exit status: 0
[2025-10-11 00:00:07] 2025-10-11 07:00:07,028 [wrapper] pandaids: 6838067411
[2025-10-11 00:00:07] 2025-10-11 07:00:07,097 [wrapper] cleanup supervisor_pilot 1533384 1533379
[2025-10-11 00:00:07] 2025-10-11 07:00:07,101 [wrapper] Test setup, not cleaning
[2025-10-11 00:00:07] 2025-10-11 07:00:07,104 [wrapper] apfmon messages muted
[2025-10-11 00:00:07] 2025-10-11 07:00:07,107 [wrapper] ==== wrapper stdout END ====
[2025-10-11 00:00:07] 2025-10-11 07:00:07,113 [wrapper] ==== wrapper stderr END ====
[2025-10-11 00:00:07]  *** Error codes and diagnostics ***
[2025-10-11 00:00:07]     "exeErrorCode": 65,
[2025-10-11 00:00:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 00:00:07]     "pilotErrorCode": 1305,
[2025-10-11 00:00:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 00:00:07]  *** Listing of results directory ***
[2025-10-11 00:00:07] total 221676
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc    557409 Oct 10 20:42 pilot3.tar.gz
[2025-10-11 00:00:07] -rwx------. 1 boinc boinc     36292 Oct 10 21:10 runpilot2-wrapper.sh
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc      5112 Oct 10 21:10 queuedata.json
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc       100 Oct 10 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 00:00:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 23:55 run_atlas
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc       105 Oct 10 23:55 job.xml
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc 222865037 Oct 10 23:55 EVNT.46676267._002056.pool.root.1
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc      6594 Oct 10 23:55 init_data.xml
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc     15120 Oct 10 23:55 start_atlas.sh
[2025-10-11 00:00:07] drwxrwx--x. 2 boinc boinc      4096 Oct 10 23:55 shared
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc    569679 Oct 10 23:55 input.tar.gz
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc         0 Oct 10 23:55 boinc_lockfile
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc      2551 Oct 10 23:55 pandaJob.out
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc    975525 Oct 10 23:55 agis_schedconf.cvmfs.json
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc   1560580 Oct 10 23:55 agis_ddmendpoints.agis.ALL.json
[2025-10-11 00:00:07] drwx------. 5 boinc boinc      4096 Oct 10 23:55 pilot3
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc       523 Oct 10 23:57 boinc_task_state.xml
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc       987 Oct 10 23:57 memory_monitor_summary.json
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc     21846 Oct 10 23:57 log.46676269._051099.job.log.tgz.1
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc      8396 Oct 10 23:59 heartbeat.json
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc        22 Oct 11 00:00 wrapper_checkpoint.txt
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc      8192 Oct 11 00:00 boinc_mmap_file
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc       823 Oct 11 00:00 pilotlog.txt
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc        95 Oct 11 00:00 pilot_heartbeat.json
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc     91065 Oct 11 00:00 log.46676269._051099.job.log.1
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc       188 Oct 11 00:00 output.list
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc       620 Oct 11 00:00 runtime_log
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc    133120 Oct 11 00:00 result.tar.gz
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc       644 Oct 11 00:00 WqSMDmK7fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDme9QMDmrwjOYm.diag
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc      8528 Oct 11 00:00 runtime_log.err
[2025-10-11 00:00:07] -rw-r--r--. 1 boinc boinc     21818 Oct 11 00:00 stderr.txt
[2025-10-11 00:00:07] No HITS result produced
[2025-10-11 00:00:07]  *** Contents of shared directory: ***
[2025-10-11 00:00:07] total 218356
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc 222865037 Oct 10 23:55 ATLAS.root_0
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc     15120 Oct 10 23:55 start_atlas.sh
[2025-10-11 00:00:07] -rw-r--r--. 2 boinc boinc    569679 Oct 10 23:55 input.tar.gz
[2025-10-11 00:00:07] -rw-------. 1 boinc boinc    133120 Oct 11 00:00 result.tar.gz
00:00:09 (1529688): run_atlas exited; CPU time 25.834367
00:00:09 (1529688): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN