Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:08:36 (194986): wrapper (7.7.26015): starting
03:08:36 (194986): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 03:08:36] Arguments: --nthreads 4
[2025-10-12 03:08:36] Threads: 4
[2025-10-12 03:08:36] Checking for CVMFS
[2025-10-12 03:08:36] No cvmfs_config command found, will try listing directly
[2025-10-12 03:08:36] CVMFS is ok
[2025-10-12 03:08:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:08:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:08:36] Further information can be found at the LHC@home message board.
[2025-10-12 03:08:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:08:36] Checking for apptainer binary...
[2025-10-12 03:08:36] which: no apptainer in ((null))
[2025-10-12 03:08:36] apptainer is not installed, using version from CVMFS
[2025-10-12 03:08:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:08:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-10-12 03:08:36] apptainer works
[2025-10-12 03:08:36] Set ATHENA_PROC_NUMBER=4
[2025-10-12 03:08:36] Set ATHENA_CORE_NUMBER=4
[2025-10-12 03:08:36] Starting ATLAS job with PandaID=6838068007
[2025-10-12 03:08:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:25:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:25:49] 2025-10-12 03:57:10,484 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6838068007/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,485 | INFO     | extracted standard info from prmon json
[2025-10-12 06:25:49] 2025-10-12 03:57:10,486 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:25:49] 2025-10-12 03:57:10,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:25:49] 2025-10-12 03:57:10,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:25:49] 2025-10-12 03:57:10,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:25:49] 2025-10-12 03:57:10,489 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:25:49] 2025-10-12 03:57:10,490 | INFO     | sum of square deviations: 1392881930.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,491 | INFO     | sum of deviations: 12900556879.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,491 | INFO     | mean x: 1760236357.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,491 | INFO     | mean y: 2338312.327272727
[2025-10-12 06:25:49] 2025-10-12 03:57:10,491 | INFO     | -- intersect: -16300572045.596785
[2025-10-12 06:25:49] 2025-10-12 03:57:10,491 | INFO     | intersect: -16300572045.596785
[2025-10-12 06:25:49] 2025-10-12 03:57:10,492 | INFO     | chi2: 1.4162750150177104
[2025-10-12 06:25:49] 2025-10-12 03:57:10,492 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,493 | INFO     | sum of deviations: 12438878165.499998
[2025-10-12 06:25:49] 2025-10-12 03:57:10,493 | INFO     | mean x: 1760236204.5
[2025-10-12 06:25:49] 2025-10-12 03:57:10,493 | INFO     | mean y: 2337738.95625
[2025-10-12 06:25:49] 2025-10-12 03:57:10,493 | INFO     | -- intersect: -17237404033.35334
[2025-10-12 06:25:49] 2025-10-12 03:57:10,493 | INFO     | intersect: -17237404033.35334
[2025-10-12 06:25:49] 2025-10-12 03:57:10,494 | INFO     | chi2: 1.417494506724895
[2025-10-12 06:25:49] 2025-10-12 03:57:10,494 | INFO     | current chi2=1.417494506724895 (change=-0.08610557231141694 %)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,494 | INFO     | right removable region: 159
[2025-10-12 06:25:49] 2025-10-12 03:57:10,494 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,495 | INFO     | sum of deviations: -9533356208.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,495 | INFO     | mean x: 1760236509.5
[2025-10-12 06:25:49] 2025-10-12 03:57:10,495 | INFO     | mean y: 2365764.5125
[2025-10-12 06:25:49] 2025-10-12 03:57:10,495 | INFO     | -- intersect: 13215183314.486036
[2025-10-12 06:25:49] 2025-10-12 03:57:10,496 | INFO     | intersect: 13215183314.486036
[2025-10-12 06:25:49] 2025-10-12 03:57:10,496 | INFO     | chi2: 0.027900978070478408
[2025-10-12 06:25:49] 2025-10-12 03:57:10,496 | INFO     | current chi2=0.027900978070478408 (change=98.02997456181704 %)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,496 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,497 | INFO     | sum of deviations: -9829849209.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,497 | INFO     | mean x: 1760236662.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,497 | INFO     | mean y: 2366129.3483870965
[2025-10-12 06:25:49] 2025-10-12 03:57:10,497 | INFO     | -- intersect: 14987563816.606644
[2025-10-12 06:25:49] 2025-10-12 03:57:10,498 | INFO     | intersect: 14987563816.606644
[2025-10-12 06:25:49] 2025-10-12 03:57:10,498 | INFO     | chi2: 0.02259055185683001
[2025-10-12 06:25:49] 2025-10-12 03:57:10,498 | INFO     | current chi2=0.02259055185683001 (change=19.033118481488927 %)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,498 | INFO     | left removable region: 20
[2025-10-12 06:25:49] 2025-10-12 03:57:10,498 | INFO     | sum of square deviations: 832722590.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,499 | INFO     | sum of deviations: -7610831164.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,499 | INFO     | mean x: 1760236784.0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,499 | INFO     | mean y: 2363414.4820143883
[2025-10-12 06:25:49] 2025-10-12 03:57:10,499 | INFO     | -- intersect: 16090392168.074896
[2025-10-12 06:25:49] 2025-10-12 03:57:10,500 | INFO     | intersect: 16090392168.074896
[2025-10-12 06:25:49] 2025-10-12 03:57:10,500 | INFO     | chi2: 0.02144129144191235
[2025-10-12 06:25:49] 2025-10-12 03:57:10,500 | INFO     | -- intersect: 16090392168.074896
[2025-10-12 06:25:49] 2025-10-12 03:57:10,500 | INFO     | current memory leak: -9.14 B/s (using 139 data points, chi2=0.02)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | could have reported an average CPU frequency of 2653 MHz (9 samples)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | ..............................
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . Timing measurements:
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . get job = 0 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . initial setup = 1 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . payload setup = 6 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . stage-in = 0 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,501 | INFO     | . payload execution = 10068 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,502 | INFO     | . stage-out = 0 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,502 | INFO     | . log creation = 0 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,502 | INFO     | ..............................
[2025-10-12 06:25:49] 2025-10-12 03:57:10,570 | INFO     | time since job start (10103s) is within the limit (172800.0s)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,603 | INFO     | 
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | job summary report
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | --------------------------------------------------
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | PanDA job id: 6838068007
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | task id: 46676269
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | errors: (none)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:25:49] 2025-10-12 03:57:10,604 | INFO     | pilot state: finished 
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | transexitcode: 0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | exeerrorcode: 0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | exeerrordiag: 
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | exitcode: 0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | exitmsg: OK
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | cpuconsumptiontime: 38624 s
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | nevents: 400
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | neventsw: 0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | pid: 205687
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | pgrp: 205687
[2025-10-12 06:25:49] 2025-10-12 03:57:10,605 | INFO     | corecount: 4
[2025-10-12 06:25:49] 2025-10-12 03:57:10,606 | INFO     | event service: False
[2025-10-12 06:25:49] 2025-10-12 03:57:10,606 | INFO     | sizes: {0: 2348754, 1: 2348868, 5: 2349158, 11: 2349214, 10078: 2377879, 10080: 2387083, 10087: 2387313}
[2025-10-12 06:25:49] 2025-10-12 03:57:10,606 | INFO     | --------------------------------------------------
[2025-10-12 06:25:49] 2025-10-12 03:57:10,606 | INFO     | 
[2025-10-12 06:25:49] 2025-10-12 03:57:10,606 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 06:25:49] 2025-10-12 03:57:10,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:25:49] 2025-10-12 03:57:10,631 | INFO     | job 6838068007 has completed (purged errors)
[2025-10-12 06:25:49] 2025-10-12 03:57:10,631 | INFO     | overall cleanup function is called
[2025-10-12 06:25:49] 2025-10-12 03:57:10,981 | INFO     | number of running child processes to parent process 205687: 1
[2025-10-12 06:25:49] 2025-10-12 03:57:10,982 | INFO     | maximum number of monitored processes: 6
[2025-10-12 06:25:49] 2025-10-12 03:57:10,982 | INFO     | aborting job monitoring since job object (job id=6838068007) has expired
[2025-10-12 06:25:49] 2025-10-12 03:57:11,640 | INFO     | --- collectZombieJob: --- 10, [205687]
[2025-10-12 06:25:49] 2025-10-12 03:57:11,640 | INFO     | zombie collector waiting for pid 205687
[2025-10-12 06:25:49] 2025-10-12 03:57:11,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:25:49] 2025-10-12 03:57:11,641 | INFO     | collected zombie processes
[2025-10-12 06:25:49] 2025-10-12 03:57:11,641 | INFO     | will attempt to kill all subprocesses of pid=205687
[2025-10-12 06:25:49] 2025-10-12 03:57:11,988 | INFO     | process IDs to be killed: [205687] (in reverse order)
[2025-10-12 06:25:49] 2025-10-12 03:57:12,095 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:25:49] 2025-10-12 03:57:12,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:25:49] 2025-10-12 03:57:12,108 | INFO     | did not find any defunct processes belonging to 205687
[2025-10-12 06:25:49] 2025-10-12 03:57:12,120 | INFO     | did not find any defunct processes belonging to 205687
[2025-10-12 06:25:49] 2025-10-12 03:57:12,120 | INFO     | ready for new job
[2025-10-12 06:25:49] 2025-10-12 03:57:12,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:25:49] 2025-10-12 03:57:12,123 | INFO     | ***************************************
[2025-10-12 06:25:49] 2025-10-12 03:57:12,123 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:25:49] 2025-10-12 03:57:12,123 | INFO     | ***************************************
[2025-10-12 06:25:49] 2025-10-12 03:57:12,123 | INFO     | 
[2025-10-12 06:25:49] 2025-10-12 03:57:12,127 | INFO     | architecture information:
[2025-10-12 06:25:49] 2025-10-12 03:57:12,127 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:25:49] 2025-10-12 03:57:12,142 | INFO     | cat /etc/os-release:
[2025-10-12 06:25:49] NAME="CentOS Linux"
[2025-10-12 06:25:49] VERSION="7 (Core)"
[2025-10-12 06:25:49] ID="centos"
[2025-10-12 06:25:49] ID_LIKE="rhel fedora"
[2025-10-12 06:25:49] VERSION_ID="7"
[2025-10-12 06:25:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:25:49] ANSI_COLOR="0;31"
[2025-10-12 06:25:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:25:49] HOME_URL="https://www.centos.org/"
[2025-10-12 06:25:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:25:49] 
[2025-10-12 06:25:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:25:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:25:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:25:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:25:49] 
[2025-10-12 06:25:49] 2025-10-12 03:57:12,142 | INFO     | ***************************************
[2025-10-12 06:25:49] 2025-10-12 03:57:12,645 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 06:25:49] 2025-10-12 03:57:12,662 | INFO     | sufficient remaining disk space (691987808256 B)
[2025-10-12 06:25:49] 2025-10-12 03:57:12,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:25:49] 2025-10-12 03:57:12,662 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:25:49] 2025-10-12 03:57:12,663 | INFO     | update_server=False
[2025-10-12 06:25:49] 2025-10-12 03:57:12,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:25:49] 2025-10-12 03:57:12,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:25:49] 2025-10-12 03:57:12,663 | INFO     | aborting loop
[2025-10-12 06:25:49] 2025-10-12 03:57:13,647 | INFO     | all data control threads have been joined
[2025-10-12 06:25:49] 2025-10-12 03:57:13,658 | INFO     | all payload control threads have been joined
[2025-10-12 06:25:49] 2025-10-12 03:57:13,668 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:13,669 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:13,748 | INFO     | all job control threads have been joined
[2025-10-12 06:25:49] 2025-10-12 03:57:13,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:25:49] 2025-10-12 03:57:14,063 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,446 | INFO     | [job] validate thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:25:49] 2025-10-12 03:57:14,652 | INFO     | [data] control thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,664 | INFO     | [payload] control thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,752 | INFO     | [job] control thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,765 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,774 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,791 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:14,794 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:15,087 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:15,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:25:49] 2025-10-12 03:57:15,969 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:16,614 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:18,569 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:23,124 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:25:49] 2025-10-12 03:57:24,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:25:49] 2025-10-12 03:57:44,124 | INFO     | PID=198740 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:25:49] 2025-10-12 03:57:44,124 | INFO     | .. there are 4 such processes running
[2025-10-12 06:25:49] 2025-10-12 03:57:44,125 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:25:49] 2025-10-12 03:57:44,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:25:49] 2025-10-12 03:57:44,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:25:49] 2025-10-12 03:58:03,410 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:25:49] 2025-10-12 03:58:03,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23057144125248)>', '<ExcThread(monitor, started 23056902743808)>']
[2025-10-12 06:25:49] 2025-10-12 03:58:04,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:25:49] 2025-10-12 03:58:04,222 | INFO     | [monitor] control thread has ended
[2025-10-12 06:25:49] 2025-10-12 03:58:08,911 | INFO     | all workflow threads have been joined
[2025-10-12 06:25:49] 2025-10-12 03:58:08,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:25:49] 2025-10-12 03:58:08,912 | INFO     | traces error code: 0
[2025-10-12 06:25:49] 2025-10-12 03:58:08,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:25:49] 2025-10-12 03:58:09,054 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:25:49] 2025-10-12 03:58:09,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:25:49] 2025-10-12 03:58:09,060 [wrapper] pilotpid: 198740
[2025-10-12 06:25:49] 2025-10-12 03:58:09,063 [wrapper] Pilot exit status: 0
[2025-10-12 06:25:49] 2025-10-12 03:58:09,072 [wrapper] pandaids: 6838068007
[2025-10-12 06:25:49] 2025-10-12 03:58:09,145 [wrapper] cleanup supervisor_pilot  409909 198741
[2025-10-12 06:25:49] 2025-10-12 03:58:09,148 [wrapper] Test setup, not cleaning
[2025-10-12 06:25:49] 2025-10-12 03:58:09,151 [wrapper] apfmon messages muted
[2025-10-12 06:25:49] 2025-10-12 03:58:09,154 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:25:49] 2025-10-12 03:58:09,156 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:25:49]  *** Error codes and diagnostics ***
[2025-10-12 06:25:49]     "exeErrorCode": 0,
[2025-10-12 06:25:49]     "exeErrorDiag": "",
[2025-10-12 06:25:49]     "pilotErrorCode": 0,
[2025-10-12 06:25:49]     "pilotErrorDiag": "",
[2025-10-12 06:25:49]  *** Listing of results directory ***
[2025-10-12 06:25:49] total 409532
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:10 queuedata.json
[2025-10-12 06:25:49] -rwx------ 1 boinc boinc     36292 Oct 11 06:11 runpilot2-wrapper.sh
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc       100 Oct 12 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:25:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 03:08 run_atlas
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc       105 Oct 12 03:08 job.xml
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc 220875375 Oct 12 03:08 EVNT.46676267._002062.pool.root.1
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc      6633 Oct 12 03:08 init_data.xml
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:08 start_atlas.sh
[2025-10-12 06:25:49] drwxrwx--x 2 boinc boinc      4096 Oct 12 03:08 shared
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc    569679 Oct 12 03:08 input.tar.gz
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc         0 Oct 12 03:08 boinc_lockfile
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc      2550 Oct 12 03:08 pandaJob.out
[2025-10-12 06:25:49] -rw------- 1 boinc boinc    975496 Oct 12 03:08 agis_schedconf.cvmfs.json
[2025-10-12 06:25:49] -rw------- 1 boinc boinc   1560580 Oct 12 03:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:25:49] drwx------ 5 boinc boinc      4096 Oct 12 03:08 pilot3
[2025-10-12 06:25:49] -rw------- 1 boinc boinc 190990139 Oct 12 05:56 HITS.46676269._051258.pool.root.1
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc       528 Oct 12 05:56 boinc_task_state.xml
[2025-10-12 06:25:49] -rw------- 1 boinc boinc      1031 Oct 12 05:56 memory_monitor_summary.json
[2025-10-12 06:25:49] -rw------- 1 boinc boinc    352766 Oct 12 05:57 log.46676269._051258.job.log.tgz.1
[2025-10-12 06:25:49] -rw------- 1 boinc boinc      7830 Oct 12 05:57 heartbeat.json
[2025-10-12 06:25:49] -rw------- 1 boinc boinc        95 Oct 12 05:57 pilot_heartbeat.json
[2025-10-12 06:25:49] -rw------- 1 boinc boinc      4904 Oct 12 05:58 pilotlog.txt
[2025-10-12 06:25:49] -rw------- 1 boinc boinc   1437891 Oct 12 05:58 log.46676269._051258.job.log.1
[2025-10-12 06:25:49] -rw------- 1 boinc boinc       357 Oct 12 05:58 output.list
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:58 runtime_log
[2025-10-12 06:25:49] -rw------- 1 boinc boinc   1812480 Oct 12 05:58 result.tar.gz
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc      9070 Oct 12 05:58 runtime_log.err
[2025-10-12 06:25:49] -rw------- 1 boinc boinc       664 Oct 12 05:58 GcDMDmt7fR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLNfNDmVSlXqm.diag
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc      8192 Oct 12 06:25 boinc_mmap_file
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc        27 Oct 12 06:25 wrapper_checkpoint.txt
[2025-10-12 06:25:49] -rw-r--r-- 1 boinc boinc     20843 Oct 12 06:25 stderr.txt
[2025-10-12 06:25:49] HITS file was successfully produced:
[2025-10-12 06:25:49] -rw------- 1 boinc boinc 190990139 Oct 12 05:56 shared/HITS.pool.root.1
[2025-10-12 06:25:49]  *** Contents of shared directory: ***
[2025-10-12 06:25:49] total 404572
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc 220875375 Oct 12 03:08 ATLAS.root_0
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:08 start_atlas.sh
[2025-10-12 06:25:49] -rw-r--r-- 2 boinc boinc    569679 Oct 12 03:08 input.tar.gz
[2025-10-12 06:25:49] -rw------- 1 boinc boinc 190990139 Oct 12 05:56 HITS.pool.root.1
[2025-10-12 06:25:49] -rw------- 1 boinc boinc   1812480 Oct 12 05:58 result.tar.gz
06:25:51 (194986): run_atlas exited; CPU time 39034.695504
06:25:51 (194986): called boinc_finish(0)

</stderr_txt>
]]>

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