Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:24:57 (2603249): wrapper (7.7.26015): starting
07:24:57 (2603249): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 07:24:57] Arguments: --nthreads 4
[2025-10-12 07:24:57] Threads: 4
[2025-10-12 07:24:57] Checking for CVMFS
[2025-10-12 07:24:57] No cvmfs_config command found, will try listing directly
[2025-10-12 07:24:57] CVMFS is ok
[2025-10-12 07:24:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:24:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:24:57] Further information can be found at the LHC@home message board.
[2025-10-12 07:24:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:24:57] Checking for apptainer binary...
[2025-10-12 07:24:57] which: no apptainer in ((null))
[2025-10-12 07:24:57] apptainer is not installed, using version from CVMFS
[2025-10-12 07:24:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:24:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-12 07:24:57] apptainer works
[2025-10-12 07:24:57] Set ATHENA_PROC_NUMBER=4
[2025-10-12 07:24:57] Set ATHENA_CORE_NUMBER=4
[2025-10-12 07:24:57] Starting ATLAS job with PandaID=6838066327
[2025-10-12 07:24:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:18:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:18:12] 2025-10-12 08:15:54,285 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:18:12] 2025-10-12 08:15:54,285 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,286 | INFO     | sum of deviations: -19825195932.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | mean x: 1760251830.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | mean y: 2360332.214285714
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | -- intersect: 23738025740.780754
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | intersect: 23738025740.780754
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | chi2: 2.0036318911400404
[2025-10-12 10:18:12] 2025-10-12 08:15:54,287 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,288 | INFO     | sum of deviations: -9818262564.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,288 | INFO     | mean x: 1760251678.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | mean y: 2372030.417177914
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | -- intersect: 12872548981.390846
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | intersect: 12872548981.390846
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | chi2: 1.3480743728931703
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | current chi2=1.3480743728931703 (change=32.71846096809062 %)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,289 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,290 | INFO     | sum of deviations: -9683102332.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,290 | INFO     | mean x: 1760251525.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | mean y: 2372202.4873417723
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | -- intersect: 13938976307.380745
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | intersect: 13938976307.380745
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | chi2: 1.3450907543343462
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | current chi2=1.3450907543343462 (change=0.22132447725571885 %)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | right removable region: 157
[2025-10-12 10:18:12] 2025-10-12 08:15:54,291 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,292 | INFO     | sum of deviations: -36468371455.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,292 | INFO     | mean x: 1760251983.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | mean y: 2379808.09202454
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | -- intersect: 47806609121.12679
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | intersect: 47806609121.12679
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | chi2: 0.7978319581057296
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | current chi2=0.7978319581057296 (change=60.18071175480374 %)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,293 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,294 | INFO     | sum of deviations: -29189142787.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,294 | INFO     | mean x: 1760252135.5
[2025-10-12 10:18:12] 2025-10-12 08:15:54,294 | INFO     | mean y: 2370566.753164557
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | -- intersect: 42013458975.62084
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | intersect: 42013458975.62084
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | chi2: 0.7638430551036333
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | current chi2=0.7638430551036333 (change=4.260158126881161 %)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | left removable region: 20
[2025-10-12 10:18:12] 2025-10-12 08:15:54,295 | INFO     | sum of square deviations: 797291228.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,296 | INFO     | sum of deviations: -12830482092.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,296 | INFO     | mean x: 1760252105.0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,296 | INFO     | mean y: 2373911.802919708
[2025-10-12 10:18:12] 2025-10-12 08:15:54,296 | INFO     | -- intersect: 28329392092.17578
[2025-10-12 10:18:12] 2025-10-12 08:15:54,296 | INFO     | intersect: 28329392092.17578
[2025-10-12 10:18:12] 2025-10-12 08:15:54,297 | INFO     | chi2: 0.07403315387256289
[2025-10-12 10:18:12] 2025-10-12 08:15:54,297 | INFO     | -- intersect: 28329392092.17578
[2025-10-12 10:18:12] 2025-10-12 08:15:54,297 | INFO     | current memory leak: -16.09 B/s (using 137 data points, chi2=0.07)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,297 | INFO     | could have reported an average CPU frequency of 2715 MHz (9 samples)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | ..............................
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . Timing measurements:
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . get job = 0 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . initial setup = 1 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . payload setup = 6 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . stage-in = 0 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . payload execution = 10209 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . stage-out = 0 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | . log creation = 0 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,298 | INFO     | ..............................
[2025-10-12 10:18:12] 2025-10-12 08:15:54,432 | INFO     | 
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | job summary report
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | --------------------------------------------------
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | PanDA job id: 6838066327
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | task id: 46676269
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | errors: (none)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | pilot state: finished 
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | transexitcode: 0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | exeerrorcode: 0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | exeerrordiag: 
[2025-10-12 10:18:12] 2025-10-12 08:15:54,433 | INFO     | exitcode: 0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | exitmsg: OK
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | cpuconsumptiontime: 39548 s
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | nevents: 400
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | neventsw: 0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | pid: 2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | pgrp: 2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | corecount: 4
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | event service: False
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | sizes: {0: 2348863, 4: 2349125, 11: 2349153, 10219: 2377900, 10220: 2386920, 10222: 2386976, 10229: 2387362}
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | --------------------------------------------------
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | 
[2025-10-12 10:18:12] 2025-10-12 08:15:54,434 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-12 10:18:12] 2025-10-12 08:15:54,455 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | job 6838066327 has completed (purged errors)
[2025-10-12 10:18:12] 2025-10-12 08:15:54,457 | INFO     | overall cleanup function is called
[2025-10-12 10:18:12] 2025-10-12 08:15:55,400 | INFO     | PID=2607603 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 10:18:12] 2025-10-12 08:15:55,400 | INFO     | .. there are 2 such processes running
[2025-10-12 10:18:12] 2025-10-12 08:15:55,465 | INFO     | --- collectZombieJob: --- 10, [2614492]
[2025-10-12 10:18:12] 2025-10-12 08:15:55,465 | INFO     | zombie collector waiting for pid 2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:55,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:18:12] 2025-10-12 08:15:55,465 | INFO     | collected zombie processes
[2025-10-12 10:18:12] 2025-10-12 08:15:55,465 | INFO     | will attempt to kill all subprocesses of pid=2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:55,823 | INFO     | process IDs to be killed: [2614492] (in reverse order)
[2025-10-12 10:18:12] 2025-10-12 08:15:55,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:18:12] 2025-10-12 08:15:55,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:18:12] 2025-10-12 08:15:55,940 | INFO     | did not find any defunct processes belonging to 2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:55,952 | INFO     | did not find any defunct processes belonging to 2614492
[2025-10-12 10:18:12] 2025-10-12 08:15:55,952 | INFO     | ready for new job
[2025-10-12 10:18:12] 2025-10-12 08:15:55,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:18:12] 2025-10-12 08:15:55,954 | INFO     | ***************************************
[2025-10-12 10:18:12] 2025-10-12 08:15:55,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:18:12] 2025-10-12 08:15:55,955 | INFO     | ***************************************
[2025-10-12 10:18:12] 2025-10-12 08:15:55,955 | INFO     | 
[2025-10-12 10:18:12] 2025-10-12 08:15:55,959 | INFO     | architecture information:
[2025-10-12 10:18:12] 2025-10-12 08:15:55,959 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:18:12] 2025-10-12 08:15:55,974 | INFO     | cat /etc/os-release:
[2025-10-12 10:18:12] NAME="CentOS Linux"
[2025-10-12 10:18:12] VERSION="7 (Core)"
[2025-10-12 10:18:12] ID="centos"
[2025-10-12 10:18:12] ID_LIKE="rhel fedora"
[2025-10-12 10:18:12] VERSION_ID="7"
[2025-10-12 10:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:18:12] ANSI_COLOR="0;31"
[2025-10-12 10:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:18:12] HOME_URL="https://www.centos.org/"
[2025-10-12 10:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:18:12] 
[2025-10-12 10:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:18:12] 
[2025-10-12 10:18:12] 2025-10-12 08:15:55,975 | INFO     | ***************************************
[2025-10-12 10:18:12] 2025-10-12 08:15:56,478 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-12 10:18:12] 2025-10-12 08:15:56,494 | INFO     | sufficient remaining disk space (690297503744 B)
[2025-10-12 10:18:12] 2025-10-12 08:15:56,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:18:12] 2025-10-12 08:15:56,495 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:18:12] 2025-10-12 08:15:56,495 | INFO     | update_server=False
[2025-10-12 10:18:12] 2025-10-12 08:15:56,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:18:12] 2025-10-12 08:15:56,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:18:12] 2025-10-12 08:15:56,842 | INFO     | all data control threads have been joined
[2025-10-12 10:18:12] 2025-10-12 08:15:56,862 | INFO     | all payload control threads have been joined
[2025-10-12 10:18:12] 2025-10-12 08:15:56,970 | INFO     | all job control threads have been joined
[2025-10-12 10:18:12] 2025-10-12 08:15:57,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:12] 2025-10-12 08:15:57,366 | INFO     | aborting loop
[2025-10-12 10:18:12] 2025-10-12 08:15:57,501 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:57,836 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:57,848 | INFO     | [data] control thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:57,867 | INFO     | [payload] control thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:57,975 | INFO     | [job] control thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,371 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,501 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:18:12] 2025-10-12 08:15:58,570 | INFO     | [job] validate thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,646 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,721 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,722 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,780 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:58,851 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:15:59,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:12] 2025-10-12 08:16:00,413 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:16:02,561 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:16:07,001 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:18:12] 2025-10-12 08:16:08,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:18:12] 2025-10-12 08:16:26,706 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:18:12] 2025-10-12 08:16:27,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22809443059520)>', '<ExcThread(monitor, started 22809203930880)>']
[2025-10-12 10:18:12] 2025-10-12 08:16:27,940 | INFO     | PID=2607603 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:18:12] 2025-10-12 08:16:27,940 | INFO     | .. there are 2 such processes running
[2025-10-12 10:18:12] 2025-10-12 08:16:27,940 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:18:12] 2025-10-12 08:16:27,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:18:12] 2025-10-12 08:16:27,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:18:12] 2025-10-12 08:16:27,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:18:12] 2025-10-12 08:16:27,941 | INFO     | [monitor] control thread has ended
[2025-10-12 10:18:12] 2025-10-12 08:16:32,816 | INFO     | all workflow threads have been joined
[2025-10-12 10:18:12] 2025-10-12 08:16:32,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:18:12] 2025-10-12 08:16:32,817 | INFO     | traces error code: 0
[2025-10-12 10:18:12] 2025-10-12 08:16:32,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:18:12] 2025-10-12 08:16:32,964 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:18:12] 2025-10-12 08:16:32,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:18:12] 2025-10-12 08:16:32,969 [wrapper] pilotpid: 2607603
[2025-10-12 10:18:12] 2025-10-12 08:16:32,971 [wrapper] Pilot exit status: 0
[2025-10-12 10:18:12] 2025-10-12 08:16:32,980 [wrapper] pandaids: 6838066327
[2025-10-12 10:18:12] 2025-10-12 08:16:33,050 [wrapper] cleanup supervisor_pilot 2781831 2607604
[2025-10-12 10:18:12] 2025-10-12 08:16:33,053 [wrapper] Test setup, not cleaning
[2025-10-12 10:18:12] 2025-10-12 08:16:33,056 [wrapper] apfmon messages muted
[2025-10-12 10:18:12] 2025-10-12 08:16:33,058 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:18:12] 2025-10-12 08:16:33,060 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:18:12]  *** Error codes and diagnostics ***
[2025-10-12 10:18:12]     "exeErrorCode": 0,
[2025-10-12 10:18:12]     "exeErrorDiag": "",
[2025-10-12 10:18:12]     "pilotErrorCode": 0,
[2025-10-12 10:18:12]     "pilotErrorDiag": "",
[2025-10-12 10:18:12]  *** Listing of results directory ***
[2025-10-12 10:18:12] total 410168
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:10 queuedata.json
[2025-10-12 10:18:12] -rwx------ 1 boinc boinc     36292 Oct 11 06:10 runpilot2-wrapper.sh
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:18:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:24 run_atlas
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:24 job.xml
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc      6635 Oct 12 07:24 init_data.xml
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc 220297435 Oct 12 07:24 EVNT.46676267._002047.pool.root.1
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:24 start_atlas.sh
[2025-10-12 10:18:12] drwxrwx--x 2 boinc boinc      4096 Oct 12 07:24 shared
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc    569679 Oct 12 07:24 input.tar.gz
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:24 boinc_lockfile
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc      2548 Oct 12 07:24 pandaJob.out
[2025-10-12 10:18:12] -rw------- 1 boinc boinc    975528 Oct 12 07:25 agis_schedconf.cvmfs.json
[2025-10-12 10:18:12] -rw------- 1 boinc boinc   1560580 Oct 12 07:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:18:12] drwx------ 5 boinc boinc      4096 Oct 12 07:25 pilot3
[2025-10-12 10:18:12] -rw------- 1 boinc boinc 192215622 Oct 12 10:15 HITS.46676269._050864.pool.root.1
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc       528 Oct 12 10:15 boinc_task_state.xml
[2025-10-12 10:18:12] -rw------- 1 boinc boinc      1033 Oct 12 10:15 memory_monitor_summary.json
[2025-10-12 10:18:12] -rw------- 1 boinc boinc    332715 Oct 12 10:15 log.46676269._050864.job.log.tgz.1
[2025-10-12 10:18:12] -rw------- 1 boinc boinc      7827 Oct 12 10:15 heartbeat.json
[2025-10-12 10:18:12] -rw------- 1 boinc boinc        95 Oct 12 10:15 pilot_heartbeat.json
[2025-10-12 10:18:12] -rw------- 1 boinc boinc      4905 Oct 12 10:16 pilotlog.txt
[2025-10-12 10:18:12] -rw------- 1 boinc boinc   1463165 Oct 12 10:16 log.46676269._050864.job.log.1
[2025-10-12 10:18:12] -rw------- 1 boinc boinc       357 Oct 12 10:16 output.list
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:16 runtime_log
[2025-10-12 10:18:12] -rw------- 1 boinc boinc   1812480 Oct 12 10:16 result.tar.gz
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc      9070 Oct 12 10:16 runtime_log.err
[2025-10-12 10:18:12] -rw------- 1 boinc boinc       665 Oct 12 10:16 S4wKDm86fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmB8QMDmn3Vwmn.diag
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc        27 Oct 12 10:17 wrapper_checkpoint.txt
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:18 boinc_mmap_file
[2025-10-12 10:18:12] -rw-r--r-- 1 boinc boinc     20756 Oct 12 10:18 stderr.txt
[2025-10-12 10:18:12] HITS file was successfully produced:
[2025-10-12 10:18:12] -rw------- 1 boinc boinc 192215622 Oct 12 10:15 shared/HITS.pool.root.1
[2025-10-12 10:18:12]  *** Contents of shared directory: ***
[2025-10-12 10:18:12] total 405204
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc 220297435 Oct 12 07:24 ATLAS.root_0
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:24 start_atlas.sh
[2025-10-12 10:18:12] -rw-r--r-- 2 boinc boinc    569679 Oct 12 07:24 input.tar.gz
[2025-10-12 10:18:12] -rw------- 1 boinc boinc 192215622 Oct 12 10:15 HITS.pool.root.1
[2025-10-12 10:18:12] -rw------- 1 boinc boinc   1812480 Oct 12 10:16 result.tar.gz
10:18:13 (2603249): run_atlas exited; CPU time 39965.427593
10:18:13 (2603249): called boinc_finish(0)

</stderr_txt>
]]>

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