Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:50 (2717342): wrapper (7.7.26015): starting
22:50:50 (2717342): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 22:50:50] Arguments: --nthreads 6
[2025-10-11 22:50:50] Threads: 6
[2025-10-11 22:50:50] Checking for CVMFS
[2025-10-11 22:50:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:50:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:50:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:50:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:50:50] 2.12.7.0 249871 4513 95564 151585 0 57 13669710 20971521 929 130560 0 7663512 99.995 157811 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 22:50:50] CVMFS is ok
[2025-10-11 22:50:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:50:50] Checking for apptainer binary...
[2025-10-11 22:50:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:50:50] Running /usr/bin/apptainer --version
[2025-10-11 22:50:50] apptainer version 1.4.0-1.el9
[2025-10-11 22:50:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:50:51] testio005
[2025-10-11 22:50:51] apptainer works
[2025-10-11 22:50:51] Set ATHENA_PROC_NUMBER=6
[2025-10-11 22:50:51] Set ATHENA_CORE_NUMBER=6
[2025-10-11 22:50:51] Starting ATLAS job with PandaID=6837730276
[2025-10-11 22:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:22:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:22:33] 2025-10-11 15:21:07,918 | INFO     | time since job start (5387s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:08,291 | INFO     | monitor loop #430: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:08,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:09,923 | INFO     | time since job start (5389s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:10,794 | INFO     | monitor loop #431: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:10,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:11,929 | INFO     | time since job start (5391s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:13,297 | INFO     | monitor loop #432: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:13,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:13,934 | INFO     | time since job start (5393s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:15,801 | INFO     | monitor loop #433: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:15,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:15,940 | INFO     | time since job start (5395s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:17,944 | INFO     | time since job start (5397s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:18,304 | INFO     | monitor loop #434: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:18,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:19,045 | INFO     | PID=2721130 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:22:33] 2025-10-11 15:21:19,045 | INFO     | .. there are 2 such processes running
[2025-10-12 00:22:33] 2025-10-11 15:21:20,045 | INFO     | time since job start (5400s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:20,807 | INFO     | monitor loop #435: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:20,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:22,051 | INFO     | time since job start (5402s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:23,310 | INFO     | monitor loop #436: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:23,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:24,056 | INFO     | time since job start (5404s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:25,813 | INFO     | monitor loop #437: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:25,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:26,061 | INFO     | time since job start (5406s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:28,066 | INFO     | time since job start (5408s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:28,316 | INFO     | monitor loop #438: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:28,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:30,072 | INFO     | time since job start (5410s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:30,819 | INFO     | monitor loop #439: job 0:6837730276 is in state 'finished'
[2025-10-12 00:22:33] 2025-10-11 15:21:30,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:22:33] 2025-10-11 15:21:32,074 | INFO     | time since job start (5412s) is within the limit (172800.0s)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,227 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 00:22:33] 2025-10-11 15:21:33,229 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3324.2326249999996
[2025-10-12 00:22:33] 2025-10-11 15:21:33,231 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837730276/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,232 | INFO     | extracted standard info from prmon json
[2025-10-12 00:22:33] 2025-10-11 15:21:33,232 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:22:33] 2025-10-11 15:21:33,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:22:33] 2025-10-11 15:21:33,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:22:33] 2025-10-11 15:21:33,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:22:33] 2025-10-11 15:21:33,233 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:22:33] 2025-10-11 15:21:33,233 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | sum of deviations: -7262906348.5
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | mean x: 1760193417.5
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | mean y: 2493421.3625
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | -- intersect: 80538541636.63176
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | intersect: 80538541636.63176
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | chi2: 0.14290495451019458
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | -- intersect: 80538541636.63176
[2025-10-12 00:22:33] 2025-10-11 15:21:33,234 | INFO     | current memory leak: -45.75 B/s (using 80 data points, chi2=0.14)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | could have reported an average CPU frequency of 3326 MHz (6 samples)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | ..............................
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . Timing measurements:
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . get job = 0 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . initial setup = 23 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . payload setup = 4 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . stage-in = 0 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . payload execution = 5276 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . stage-out = 0 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | . log creation = 0 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,235 | INFO     | ..............................
[2025-10-12 00:22:33] 2025-10-11 15:21:33,296 | INFO     | 
[2025-10-12 00:22:33] 2025-10-11 15:21:33,296 | INFO     | job summary report
[2025-10-12 00:22:33] 2025-10-11 15:21:33,296 | INFO     | --------------------------------------------------
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | PanDA job id: 6837730276
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | task id: 46676269
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | errors: (none)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | pilot state: finished 
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | transexitcode: 0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | exeerrorcode: 0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | exeerrordiag: 
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | exitcode: 0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | exitmsg: OK
[2025-10-12 00:22:33] 2025-10-11 15:21:33,297 | INFO     | cpuconsumptiontime: 29013 s
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | nevents: 400
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | neventsw: 0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | pid: 2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | pgrp: 2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | corecount: 6
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | event service: False
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 5284: 2375717, 5285: 2384715, 5287: 2384899, 5398: 2385093}
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | --------------------------------------------------
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | 
[2025-10-12 00:22:33] 2025-10-11 15:21:33,298 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 00:22:33] 2025-10-11 15:21:33,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | job 6837730276 has completed (purged errors)
[2025-10-12 00:22:33] 2025-10-11 15:21:33,316 | INFO     | overall cleanup function is called
[2025-10-12 00:22:33] 2025-10-11 15:21:34,323 | INFO     | --- collectZombieJob: --- 10, [2729181]
[2025-10-12 00:22:33] 2025-10-11 15:21:34,323 | INFO     | zombie collector waiting for pid 2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:34,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:22:33] 2025-10-11 15:21:34,323 | INFO     | collected zombie processes
[2025-10-12 00:22:33] 2025-10-11 15:21:34,323 | INFO     | will attempt to kill all subprocesses of pid=2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:34,400 | INFO     | process IDs to be killed: [2729181] (in reverse order)
[2025-10-12 00:22:33] 2025-10-11 15:21:34,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:22:33] 2025-10-11 15:21:34,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:22:33] 2025-10-11 15:21:34,435 | INFO     | did not find any defunct processes belonging to 2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:34,437 | INFO     | did not find any defunct processes belonging to 2729181
[2025-10-12 00:22:33] 2025-10-11 15:21:34,437 | INFO     | ready for new job
[2025-10-12 00:22:33] 2025-10-11 15:21:34,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:22:33] 2025-10-11 15:21:34,438 | INFO     | ***************************************
[2025-10-12 00:22:33] 2025-10-11 15:21:34,438 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:22:33] 2025-10-11 15:21:34,438 | INFO     | ***************************************
[2025-10-12 00:22:33] 2025-10-11 15:21:34,438 | INFO     | 
[2025-10-12 00:22:33] 2025-10-11 15:21:34,439 | INFO     | architecture information:
[2025-10-12 00:22:33] 2025-10-11 15:21:34,439 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:22:33] 2025-10-11 15:21:34,450 | INFO     | cat /etc/os-release:
[2025-10-12 00:22:33] NAME="CentOS Linux"
[2025-10-12 00:22:33] VERSION="7 (Core)"
[2025-10-12 00:22:33] ID="centos"
[2025-10-12 00:22:33] ID_LIKE="rhel fedora"
[2025-10-12 00:22:33] VERSION_ID="7"
[2025-10-12 00:22:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:22:33] ANSI_COLOR="0;31"
[2025-10-12 00:22:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:22:33] HOME_URL="https://www.centos.org/"
[2025-10-12 00:22:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:22:33] 
[2025-10-12 00:22:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:22:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:22:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:22:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:22:33] 
[2025-10-12 00:22:33] 2025-10-11 15:21:34,450 | INFO     | ***************************************
[2025-10-12 00:22:33] 2025-10-11 15:21:34,952 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 00:22:33] 2025-10-11 15:21:34,962 | INFO     | sufficient remaining disk space (96575946752 B)
[2025-10-12 00:22:33] 2025-10-11 15:21:34,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:22:33] 2025-10-11 15:21:34,962 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:22:33] 2025-10-11 15:21:34,963 | INFO     | update_server=False
[2025-10-12 00:22:33] 2025-10-11 15:21:34,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:22:33] 2025-10-11 15:21:34,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:22:33] 2025-10-11 15:21:34,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:22:33] 2025-10-11 15:21:34,963 | INFO     | aborting loop
[2025-10-12 00:22:33] 2025-10-11 15:21:35,182 | INFO     | all job control threads have been joined
[2025-10-12 00:22:33] 2025-10-11 15:21:35,317 | INFO     | all data control threads have been joined
[2025-10-12 00:22:33] 2025-10-11 15:21:35,568 | INFO     | all payload control threads have been joined
[2025-10-12 00:22:33] 2025-10-11 15:21:35,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:22:33] 2025-10-11 15:21:35,968 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:35,968 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:35,969 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,185 | INFO     | [job] control thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,323 | INFO     | [data] control thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,525 | INFO     | [job] validate thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:22:33] 2025-10-11 15:21:36,573 | INFO     | [payload] control thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,661 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,928 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:36,957 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:37,073 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:37,396 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:37,505 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:37,767 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:40,557 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:21:45,058 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:22:33] 2025-10-11 15:21:46,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:22:33] 2025-10-11 15:22:05,255 | INFO     | PID=2721130 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:22:33] 2025-10-11 15:22:05,256 | INFO     | .. there are 2 such processes running
[2025-10-12 00:22:33] 2025-10-11 15:22:05,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:22:33] 2025-10-11 15:22:05,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:22:33] 2025-10-11 15:22:05,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:22:33] 2025-10-11 15:22:28,049 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:22:33] 2025-10-11 15:22:28,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698871383872)>', '<ExcThread(monitor, started 140698154166016)>']
[2025-10-12 00:22:33] 2025-10-11 15:22:29,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:22:33] 2025-10-11 15:22:29,377 | INFO     | [monitor] control thread has ended
[2025-10-12 00:22:33] 2025-10-11 15:22:33,428 | INFO     | all workflow threads have been joined
[2025-10-12 00:22:33] 2025-10-11 15:22:33,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:22:33] 2025-10-11 15:22:33,429 | INFO     | traces error code: 0
[2025-10-12 00:22:33] 2025-10-11 15:22:33,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:22:33] 2025-10-11 15:22:33,510 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:22:33] 2025-10-11 15:22:33,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:22:33] 2025-10-11 15:22:33,515 [wrapper] pilotpid: 2721130
[2025-10-12 00:22:33] 2025-10-11 15:22:33,517 [wrapper] Pilot exit status: 0
[2025-10-12 00:22:33] 2025-10-11 15:22:33,525 [wrapper] pandaids: 6837730276
[2025-10-12 00:22:33] 2025-10-11 15:22:33,556 [wrapper] cleanup supervisor_pilot 2765738 2721131
[2025-10-12 00:22:33] 2025-10-11 15:22:33,558 [wrapper] Test setup, not cleaning
[2025-10-12 00:22:33] 2025-10-11 15:22:33,560 [wrapper] apfmon messages muted
[2025-10-12 00:22:33] 2025-10-11 15:22:33,562 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:22:33] 2025-10-11 15:22:33,564 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:22:33]  *** Error codes and diagnostics ***
[2025-10-12 00:22:33]     "exeErrorCode": 0,
[2025-10-12 00:22:33]     "exeErrorDiag": "",
[2025-10-12 00:22:33]     "pilotErrorCode": 0,
[2025-10-12 00:22:33]     "pilotErrorDiag": "",
[2025-10-12 00:22:33]  *** Listing of results directory ***
[2025-10-12 00:22:33] total 409792
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc    557409 Oct 11 04:04 pilot3.tar.gz
[2025-10-12 00:22:33] -rwx------. 1 boinc boinc     36292 Oct 11 04:16 runpilot2-wrapper.sh
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc      5112 Oct 11 04:16 queuedata.json
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc       100 Oct 11 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:22:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 22:50 run_atlas
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc       105 Oct 11 22:50 job.xml
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc 220108855 Oct 11 22:50 EVNT.46676267._001774.pool.root.1
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc     15120 Oct 11 22:50 start_atlas.sh
[2025-10-12 00:22:33] drwxrwx--x. 2 boinc boinc        68 Oct 11 22:50 shared
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc    569673 Oct 11 22:50 input.tar.gz
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc      9361 Oct 11 22:50 init_data.xml
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc         0 Oct 11 22:50 boinc_lockfile
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc      2549 Oct 11 22:50 pandaJob.out
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc    975520 Oct 11 22:51 agis_schedconf.cvmfs.json
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc   1560580 Oct 11 22:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:22:33] drwx------. 5 boinc boinc      4096 Oct 11 22:51 pilot3
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc 193410314 Oct 12 00:19 HITS.46676269._043837.pool.root.1
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc       529 Oct 12 00:19 boinc_task_state.xml
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc      1018 Oct 12 00:19 memory_monitor_summary.json
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc    314133 Oct 12 00:19 log.46676269._043837.job.log.tgz.1
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc      7750 Oct 12 00:21 heartbeat.json
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc        95 Oct 12 00:22 pilot_heartbeat.json
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc      8192 Oct 12 00:22 boinc_mmap_file
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc        27 Oct 12 00:22 wrapper_checkpoint.txt
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc      4895 Oct 12 00:22 pilotlog.txt
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc    793480 Oct 12 00:22 log.46676269._043837.job.log.1
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc       357 Oct 12 00:22 output.list
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc       620 Oct 12 00:22 runtime_log
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc   1126400 Oct 12 00:22 result.tar.gz
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc      8661 Oct 12 00:22 runtime_log.err
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc       642 Oct 12 00:22 mRBLDmImXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVDeNDmcOeoQn.diag
[2025-10-12 00:22:33] -rw-r--r--. 1 boinc boinc     21941 Oct 12 00:22 stderr.txt
[2025-10-12 00:22:33] HITS file was successfully produced:
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc 193410314 Oct 12 00:19 shared/HITS.pool.root.1
[2025-10-12 00:22:33]  *** Contents of shared directory: ***
[2025-10-12 00:22:33] total 405508
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc 220108855 Oct 11 22:50 ATLAS.root_0
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc     15120 Oct 11 22:50 start_atlas.sh
[2025-10-12 00:22:33] -rw-r--r--. 2 boinc boinc    569673 Oct 11 22:50 input.tar.gz
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc 193410314 Oct 12 00:19 HITS.pool.root.1
[2025-10-12 00:22:33] -rw-------. 1 boinc boinc   1126400 Oct 12 00:22 result.tar.gz
00:22:35 (2717342): run_atlas exited; CPU time 29071.235367
00:22:35 (2717342): called boinc_finish(0)

</stderr_txt>
]]>

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