Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:52:53 (2091045): wrapper (7.7.26015): starting
07:52:53 (2091045): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:52:53] Arguments: --nthreads 12
[2025-10-11 07:52:53] Threads: 12
[2025-10-11 07:52:53] Checking for CVMFS
[2025-10-11 07:52:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:52:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:52:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:52:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:52:54] 2.13.2.0 2086103 0 30484 151573 3 17 2296967 4096001 106 130560 0 13102 99.902 2764 2443 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:52:54] CVMFS is ok
[2025-10-11 07:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:52:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:52:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:52:54] Further information can be found at the LHC@home message board.
[2025-10-11 07:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:52:54] Checking for apptainer binary...
[2025-10-11 07:52:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:52:54] Running /usr/bin/apptainer --version
[2025-10-11 07:52:54] apptainer version 1.4.3
[2025-10-11 07:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:52:54] 9570
[2025-10-11 07:52:54] apptainer works
[2025-10-11 07:52:54] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:52:54] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:52:54] Starting ATLAS job with PandaID=6837875870
[2025-10-11 07:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:58:38]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:58:38] 2025-10-11 10:57:52,396 | INFO     | intersect: -8893928915.278893
[2025-10-11 12:58:38] 2025-10-11 10:57:52,396 | INFO     | chi2: 1.1953972907319685
[2025-10-11 12:58:38] 2025-10-11 10:57:52,396 | INFO     | sum of square deviations: 7879816065.469386
[2025-10-11 12:58:38] 2025-10-11 10:57:52,401 | INFO     | sum of deviations: 41061373815.408195
[2025-10-11 12:58:38] 2025-10-11 10:57:52,401 | INFO     | mean x: 1760170947.510204
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | mean y: 2661581.0306122447
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | -- intersect: -9169511557.814404
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | intersect: -9169511557.814404
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | chi2: 1.1956685257191701
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | current chi2=1.1956685257191701 (change=-0.022689944950061255 %)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | right removable region: 293
[2025-10-11 12:58:38] 2025-10-11 10:57:52,402 | INFO     | sum of square deviations: 7879814235.469387
[2025-10-11 12:58:38] 2025-10-11 10:57:52,407 | INFO     | sum of deviations: 5944568537.183677
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | mean x: 1760171252.510204
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | mean y: 2675152.105442177
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | -- intersect: -1325206233.8069572
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | intersect: -1325206233.8069572
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | chi2: 0.02386775613051402
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | current chi2=0.02386775613051402 (change=98.00336203573798 %)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,408 | INFO     | sum of square deviations: 7484578002.968843
[2025-10-11 12:58:38] 2025-10-11 10:57:52,413 | INFO     | sum of deviations: 12189309834.785473
[2025-10-11 12:58:38] 2025-10-11 10:57:52,413 | INFO     | mean x: 1760171405.0103805
[2025-10-11 12:58:38] 2025-10-11 10:57:52,413 | INFO     | mean y: 2672739.4048442906
[2025-10-11 12:58:38] 2025-10-11 10:57:52,413 | INFO     | -- intersect: -2863925031.303232
[2025-10-11 12:58:38] 2025-10-11 10:57:52,413 | INFO     | intersect: -2863925031.303232
[2025-10-11 12:58:38] 2025-10-11 10:57:52,414 | INFO     | chi2: 0.007638563084298469
[2025-10-11 12:58:38] 2025-10-11 10:57:52,414 | INFO     | current chi2=0.007638563084298469 (change=67.99630831432513 %)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,414 | INFO     | sum of square deviations: 7102783882.968332
[2025-10-11 12:58:38] 2025-10-11 10:57:52,419 | INFO     | sum of deviations: 12288443190.96127
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | mean x: 1760171557.5105634
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | mean y: 2672709.1795774647
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | -- intersect: -3042579483.0883164
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | intersect: -3042579483.0883164
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | chi2: 0.002567009966704666
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | current chi2=0.002567009966704666 (change=66.39407257130192 %)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,420 | INFO     | sum of square deviations: 6734199312.967689
[2025-10-11 12:58:38] 2025-10-11 10:57:52,426 | INFO     | sum of deviations: 10617146430.741932
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | mean x: 1760171710.0107527
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | mean y: 2673401.419354839
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | -- intersect: -2772415353.7422423
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | intersect: -2772415353.7422423
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | chi2: 0.0021086301702211868
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | current chi2=0.0021086301702211868 (change=17.856564735972277 %)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,428 | INFO     | left removable region: 40
[2025-10-11 12:58:38] 2025-10-11 10:57:52,433 | INFO     | sum of square deviations: 5021502312.9644375
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | sum of deviations: 5406535917.418973
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | mean x: 1760172137.0118577
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | mean y: 2675546.193675889
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | -- intersect: -1892461264.7613516
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | intersect: -1892461264.7613516
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | chi2: 0.0009769345304894976
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | -- intersect: -1892461264.7613516
[2025-10-11 12:58:38] 2025-10-11 10:57:52,434 | INFO     | current memory leak: 1.08 B/s (using 253 data points, chi2=0.00)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | could have reported an average CPU frequency of 2396 MHz (13 samples)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | ..............................
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . Timing measurements:
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . get job = 0 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . initial setup = 1 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . payload setup = 5 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . stage-in = 0 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . payload execution = 18245 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . stage-out = 1 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | . log creation = 0 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,439 | INFO     | ..............................
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | 
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | job summary report
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | --------------------------------------------------
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | PanDA job id: 6837875870
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | task id: 46676269
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | errors: (none)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | pilot state: finished 
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | transexitcode: 0
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | exeerrorcode: 0
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | exeerrordiag: 
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | exitcode: 0
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | exitmsg: OK
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | cpuconsumptiontime: 26816 s
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | nevents: 400
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | neventsw: 0
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | pid: 2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | pgrp: 2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | corecount: 12
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | event service: False
[2025-10-11 12:58:38] 2025-10-11 10:57:52,566 | INFO     | sizes: {0: 2348864, 4: 2349126, 11: 2349154, 18254: 2381592, 18258: 2390632, 18259: 2390688, 18274: 2391010}
[2025-10-11 12:58:38] 2025-10-11 10:57:52,567 | INFO     | --------------------------------------------------
[2025-10-11 12:58:38] 2025-10-11 10:57:52,567 | INFO     | 
[2025-10-11 12:58:38] 2025-10-11 10:57:52,567 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-11 12:58:38] 2025-10-11 10:57:52,574 | INFO     | time since job start (18290s) is within the limit (172800.0s)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,603 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:58:38] 2025-10-11 10:57:52,604 | INFO     | job 6837875870 has completed (purged errors)
[2025-10-11 12:58:38] 2025-10-11 10:57:52,604 | INFO     | overall cleanup function is called
[2025-10-11 12:58:38] 2025-10-11 10:57:53,617 | INFO     | --- collectZombieJob: --- 10, [2113035]
[2025-10-11 12:58:38] 2025-10-11 10:57:53,617 | INFO     | zombie collector waiting for pid 2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:53,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:58:38] 2025-10-11 10:57:53,617 | INFO     | collected zombie processes
[2025-10-11 12:58:38] 2025-10-11 10:57:53,617 | INFO     | will attempt to kill all subprocesses of pid=2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:53,690 | INFO     | process IDs to be killed: [2113035] (in reverse order)
[2025-10-11 12:58:38] 2025-10-11 10:57:53,744 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:58:38] 2025-10-11 10:57:53,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:58:38] 2025-10-11 10:57:53,748 | INFO     | did not find any defunct processes belonging to 2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:53,749 | INFO     | did not find any defunct processes belonging to 2113035
[2025-10-11 12:58:38] 2025-10-11 10:57:53,750 | INFO     | ready for new job
[2025-10-11 12:58:38] 2025-10-11 10:57:53,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | ***************************************
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | ***************************************
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | 
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | pilot is running in a VM
[2025-10-11 12:58:38] 2025-10-11 10:57:53,756 | INFO     | architecture information:
[2025-10-11 12:58:38] 2025-10-11 10:57:53,758 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:58:38] 2025-10-11 10:57:53,781 | INFO     | cat /etc/os-release:
[2025-10-11 12:58:38] NAME="CentOS Linux"
[2025-10-11 12:58:38] VERSION="7 (Core)"
[2025-10-11 12:58:38] ID="centos"
[2025-10-11 12:58:38] ID_LIKE="rhel fedora"
[2025-10-11 12:58:38] VERSION_ID="7"
[2025-10-11 12:58:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:58:38] ANSI_COLOR="0;31"
[2025-10-11 12:58:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:58:38] HOME_URL="https://www.centos.org/"
[2025-10-11 12:58:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:58:38] 
[2025-10-11 12:58:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:58:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:58:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:58:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:58:38] 
[2025-10-11 12:58:38] 2025-10-11 10:57:53,782 | INFO     | ***************************************
[2025-10-11 12:58:38] 2025-10-11 10:57:54,284 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | INFO     | sufficient remaining disk space (57849937920 B)
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | INFO     | update_server=False
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:58:38] 2025-10-11 10:57:54,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 12:58:38] 2025-10-11 10:57:54,313 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:58:38] 2025-10-11 10:57:54,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:58:38] 2025-10-11 10:57:54,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:58:38] 2025-10-11 10:57:54,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:58:38] 2025-10-11 10:57:54,346 | INFO     | all data control threads have been joined
[2025-10-11 12:58:38] 2025-10-11 10:57:54,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:58:38] 2025-10-11 10:57:55,250 | INFO     | all job control threads have been joined
[2025-10-11 12:58:38] 2025-10-11 10:57:55,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:58:38] 2025-10-11 10:57:55,312 | INFO     | aborting loop
[2025-10-11 12:58:38] 2025-10-11 10:57:55,318 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,318 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,324 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,351 | INFO     | [data] control thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,535 | INFO     | all payload control threads have been joined
[2025-10-11 12:58:38] 2025-10-11 10:57:55,636 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:55,636 | INFO     | [job] validate thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,135 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,244 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,255 | INFO     | [job] control thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,317 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,540 | INFO     | [payload] control thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,577 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,673 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:56,753 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:57:57,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:58:38] 2025-10-11 10:58:01,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:58:38] 2025-10-11 10:58:32,325 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:58:38] 2025-10-11 10:58:32,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124896176432960)>', '<ExcThread(monitor, started 124895056865024)>']
[2025-10-11 12:58:38] 2025-10-11 10:58:33,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:58:38] 2025-10-11 10:58:33,516 | INFO     | [monitor] control thread has ended
[2025-10-11 12:58:38] 2025-10-11 10:58:37,579 | INFO     | all workflow threads have been joined
[2025-10-11 12:58:38] 2025-10-11 10:58:37,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:58:38] 2025-10-11 10:58:37,579 | INFO     | traces error code: 0
[2025-10-11 12:58:38] 2025-10-11 10:58:37,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:58:38] 2025-10-11 10:58:38,169 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:58:38] 2025-10-11 10:58:38,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:58:38] 2025-10-11 10:58:38,211 [wrapper] pilotpid: 2095970
[2025-10-11 12:58:38] 2025-10-11 10:58:38,230 [wrapper] Pilot exit status: 0
[2025-10-11 12:58:38] 2025-10-11 10:58:38,281 [wrapper] pandaids: 6837875870
[2025-10-11 12:58:38] 2025-10-11 10:58:38,355 [wrapper] cleanup supervisor_pilot 2167095 2095971
[2025-10-11 12:58:38] 2025-10-11 10:58:38,376 [wrapper] Test setup, not cleaning
[2025-10-11 12:58:38] 2025-10-11 10:58:38,396 [wrapper] apfmon messages muted
[2025-10-11 12:58:38] 2025-10-11 10:58:38,413 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:58:38] 2025-10-11 10:58:38,429 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:58:38]  *** Error codes and diagnostics ***
[2025-10-11 12:58:38]     "exeErrorCode": 0,
[2025-10-11 12:58:38]     "exeErrorDiag": "",
[2025-10-11 12:58:38]     "pilotErrorCode": 0,
[2025-10-11 12:58:38]     "pilotErrorDiag": "",
[2025-10-11 12:58:38]  *** Listing of results directory ***
[2025-10-11 12:58:38] total 418804
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:15 pilot3.tar.gz
[2025-10-11 12:58:38] -rwx------ 1 boinc boinc     36292 Oct 11 02:29 runpilot2-wrapper.sh
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 02:29 queuedata.json
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:58:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:52 run_atlas
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:52 job.xml
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc 220277630 Oct 11 07:52 EVNT.46676267._001930.pool.root.1
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:52 start_atlas.sh
[2025-10-11 12:58:38] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:52 shared
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc    569675 Oct 11 07:52 input.tar.gz
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:52 boinc_setup_complete
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc      6411 Oct 11 07:52 init_data.xml
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:52 boinc_lockfile
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc      2550 Oct 11 07:52 pandaJob.out
[2025-10-11 12:58:38] -rw------- 1 boinc boinc    975533 Oct 11 07:53 agis_schedconf.cvmfs.json
[2025-10-11 12:58:38] drwx------ 5 boinc boinc      4096 Oct 11 07:53 pilot3
[2025-10-11 12:58:38] -rw------- 1 boinc boinc 198421257 Oct 11 12:56 HITS.46676269._047794.pool.root.1
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc       530 Oct 11 12:57 boinc_task_state.xml
[2025-10-11 12:58:38] -rw------- 1 boinc boinc        95 Oct 11 12:57 pilot_heartbeat.json
[2025-10-11 12:58:38] -rw------- 1 boinc boinc      1018 Oct 11 12:57 memory_monitor_summary.json
[2025-10-11 12:58:38] -rw------- 1 boinc boinc   1560580 Oct 11 12:57 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:58:38] -rw------- 1 boinc boinc    572233 Oct 11 12:57 log.46676269._047794.job.log.tgz.1
[2025-10-11 12:58:38] -rw------- 1 boinc boinc      7730 Oct 11 12:57 heartbeat.json
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc        28 Oct 11 12:58 wrapper_checkpoint.txt
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc      8192 Oct 11 12:58 boinc_mmap_file
[2025-10-11 12:58:38] -rw------- 1 boinc boinc      4621 Oct 11 12:58 pilotlog.txt
[2025-10-11 12:58:38] -rw------- 1 boinc boinc   2553544 Oct 11 12:58 log.46676269._047794.job.log.1
[2025-10-11 12:58:38] -rw------- 1 boinc boinc       357 Oct 11 12:58 output.list
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc       620 Oct 11 12:58 runtime_log
[2025-10-11 12:58:38] -rw------- 1 boinc boinc   3143680 Oct 11 12:58 result.tar.gz
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc      8737 Oct 11 12:58 runtime_log.err
[2025-10-11 12:58:38] -rw------- 1 boinc boinc       642 Oct 11 12:58 lh7LDmtfcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyseNDmgkrZUo.diag
[2025-10-11 12:58:38] -rw-r--r-- 1 boinc boinc     20995 Oct 11 12:58 stderr.txt
[2025-10-11 12:58:38] HITS file was successfully produced:
[2025-10-11 12:58:38] -rw------- 1 boinc boinc 198421257 Oct 11 12:56 shared/HITS.pool.root.1
[2025-10-11 12:58:38]  *** Contents of shared directory: ***
[2025-10-11 12:58:38] total 412544
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc 220277630 Oct 11 07:52 ATLAS.root_0
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:52 start_atlas.sh
[2025-10-11 12:58:38] -rw-r--r-- 2 boinc boinc    569675 Oct 11 07:52 input.tar.gz
[2025-10-11 12:58:38] -rw------- 1 boinc boinc 198421257 Oct 11 12:56 HITS.pool.root.1
[2025-10-11 12:58:38] -rw------- 1 boinc boinc   3143680 Oct 11 12:58 result.tar.gz
12:58:40 (2091045): run_atlas exited; CPU time 26818.052644
12:58:40 (2091045): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN