Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:08:44 (3127941): wrapper (7.7.26015): starting
02:08:44 (3127941): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 02:08:44] Arguments: --nthreads 11
[2025-10-11 02:08:44] Threads: 11
[2025-10-11 02:08:44] Checking for CVMFS
[2025-10-11 02:08:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 02:08:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 02:08:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 02:08:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 02:08:44] 2.13.2.0 3683012 10968 134604 151574 2 196 35466479 40960000 11379 16776704 0 113650920 99.823 55009336 32595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 02:08:44] CVMFS is ok
[2025-10-11 02:08:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 02:08:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 02:08:44] Further information can be found at the LHC@home message board.
[2025-10-11 02:08:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 02:08:44] Checking for apptainer binary...
[2025-10-11 02:08:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 02:08:44] Running /usr/bin/apptainer --version
[2025-10-11 02:08:44] apptainer version 1.4.3-1.el9
[2025-10-11 02:08:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 02:08:44] c8-7-4.aglt2.org
[2025-10-11 02:08:44] apptainer works
[2025-10-11 02:08:44] Set ATHENA_PROC_NUMBER=11
[2025-10-11 02:08:44] Set ATHENA_CORE_NUMBER=11
[2025-10-11 02:08:44] Starting ATLAS job with PandaID=6837785704
[2025-10-11 02:08:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:45:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:45:03]  status=None
[2025-10-11 02:45:03]  status_code=0
[2025-10-11 02:45:03]  storage_token=
[2025-10-11 02:45:03]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6837785704/log.46676269._045261.job.log.tgz.1
[2025-10-11 02:45:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/99/log.46676269._045261.job.log.tgz.1
[2025-10-11 02:45:03]  workdir=None
[2025-10-11 02:45:03] ]
[2025-10-11 02:45:03] 2025-10-11 06:44:06,329 | INFO     | transferring file log.46676269._045261.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6837785704/log.46676269._045261.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 02:45:03] 2025-10-11 06:44:06,330 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6837785704/log.46676269._045261.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._045261.job
[2025-10-11 02:45:03] 2025-10-11 06:44:06,347 | INFO     | adding to output.list: log.46676269._045261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/99/log.46676269._045261.job.log.tg
[2025-10-11 02:45:03] 2025-10-11 06:44:06,348 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 02:45:03] 2025-10-11 06:44:06,348 | INFO     | summary of transferred files:
[2025-10-11 02:45:03] 2025-10-11 06:44:06,348 | INFO     |  -- lfn=log.46676269._045261.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 02:45:03] 2025-10-11 06:44:06,348 | INFO     | stage-out finished correctly
[2025-10-11 02:45:03] 2025-10-11 06:44:07,263 | INFO     | monitor loop #158: job 0:6837785704 is in state 'finished'
[2025-10-11 02:45:03] 2025-10-11 06:44:07,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:45:03] 2025-10-11 06:44:08,206 | INFO     | time since job start (2114s) is within the limit (172800.0s)
[2025-10-11 02:45:03] 2025-10-11 06:44:09,232 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 02:45:03] 2025-10-11 06:44:09,772 | INFO     | monitor loop #159: job 0:6837785704 is in state 'finished'
[2025-10-11 02:45:03] 2025-10-11 06:44:09,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:45:03] 2025-10-11 06:44:10,212 | INFO     | time since job start (2116s) is within the limit (172800.0s)
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | job 6837785704 has state=finished
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | preparing for final server update for job 6837785704 in state='finished'
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | this job has now completed (state=finished)
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | log transfer has been attempted: DONE
[2025-10-11 02:45:03] 2025-10-11 06:44:12,186 | INFO     | job 6837785704 has finished - writing final server update
[2025-10-11 02:45:03] 2025-10-11 06:44:12,187 | INFO     | total number of processed events: 400 (read)
[2025-10-11 02:45:03] 2025-10-11 06:44:12,187 | INFO     | executing command: lscpu
[2025-10-11 02:45:03] 2025-10-11 06:44:12,218 | INFO     | time since job start (2118s) is within the limit (172800.0s)
[2025-10-11 02:45:03] 2025-10-11 06:44:12,240 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 02:45:03] 2025-10-11 06:44:12,275 | INFO     | monitor loop #160: job 0:6837785704 is in state 'finished'
[2025-10-11 02:45:03] 2025-10-11 06:44:12,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:45:03] 2025-10-11 06:44:14,224 | INFO     | time since job start (2120s) is within the limit (172800.0s)
[2025-10-11 02:45:03] 2025-10-11 06:44:14,777 | INFO     | monitor loop #161: job 0:6837785704 is in state 'finished'
[2025-10-11 02:45:03] 2025-10-11 06:44:14,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,847 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 02:45:03] 2025-10-11 06:44:15,864 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3606.816640624994
[2025-10-11 02:45:03] 2025-10-11 06:44:15,877 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837785704/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,877 | INFO     | extracted standard info from prmon json
[2025-10-11 02:45:03] 2025-10-11 06:44:15,878 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 02:45:03] 2025-10-11 06:44:15,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 02:45:03] 2025-10-11 06:44:15,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:45:03] 2025-10-11 06:44:15,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:45:03] 2025-10-11 06:44:15,878 | INFO     | fitting pss+swap vs Time
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | sum of square deviations: 6798267.0
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | sum of deviations: 100525712.49999999
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | mean x: 1760164085.5
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | mean y: 2307389.535714286
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | -- intersect: -26025171203.434875
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | intersect: -26025171203.434875
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | chi2: 0.0021087820779193914
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | -- intersect: -26025171203.434875
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | current memory leak: 14.79 B/s (using 28 data points, chi2=0.00)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | could have reported an average CPU frequency of 3593 MHz (5 samples)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | ..............................
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | . Timing measurements:
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | . get job = 0 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | . initial setup = 2 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,879 | INFO     | . payload setup = 4 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,880 | INFO     | . stage-in = 0 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,880 | INFO     | . payload execution = 2089 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,880 | INFO     | . stage-out = 0 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,880 | INFO     | . log creation = 0 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,880 | INFO     | ..............................
[2025-10-11 02:45:03] 2025-10-11 06:44:15,935 | INFO     | 
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | job summary report
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | --------------------------------------------------
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | PanDA job id: 6837785704
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | task id: 46676269
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | errors: (none)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | pilot state: finished 
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | transexitcode: 0
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | exeerrorcode: 0
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | exeerrordiag: 
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | exitcode: 0
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | exitmsg: OK
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | cpuconsumptiontime: 21128 s
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | nevents: 400
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | neventsw: 0
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | pid: 3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:15,936 | INFO     | pgrp: 3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | corecount: 11
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | event service: False
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | sizes: {0: 2348806, 4: 2349068, 11: 2349096, 2097: 2374220, 2098: 2383218, 2101: 2383274, 2108: 2383628}
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | --------------------------------------------------
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | 
[2025-10-11 02:45:03] 2025-10-11 06:44:15,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:45:03] 2025-10-11 06:44:15,955 | INFO     | job 6837785704 has completed (purged errors)
[2025-10-11 02:45:03] 2025-10-11 06:44:15,955 | INFO     | overall cleanup function is called
[2025-10-11 02:45:03] 2025-10-11 06:44:16,962 | INFO     | --- collectZombieJob: --- 10, [3148980]
[2025-10-11 02:45:03] 2025-10-11 06:44:16,963 | INFO     | zombie collector waiting for pid 3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:16,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:45:03] 2025-10-11 06:44:16,963 | INFO     | collected zombie processes
[2025-10-11 02:45:03] 2025-10-11 06:44:16,963 | INFO     | will attempt to kill all subprocesses of pid=3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:17,330 | INFO     | process IDs to be killed: [3148980] (in reverse order)
[2025-10-11 02:45:03] 2025-10-11 06:44:17,468 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:45:03] 2025-10-11 06:44:17,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:45:03] 2025-10-11 06:44:17,486 | INFO     | did not find any defunct processes belonging to 3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:17,500 | INFO     | did not find any defunct processes belonging to 3148980
[2025-10-11 02:45:03] 2025-10-11 06:44:17,501 | INFO     | ready for new job
[2025-10-11 02:45:03] 2025-10-11 06:44:17,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:45:03] 2025-10-11 06:44:17,502 | INFO     | ***************************************
[2025-10-11 02:45:03] 2025-10-11 06:44:17,502 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:45:03] 2025-10-11 06:44:17,502 | INFO     | ***************************************
[2025-10-11 02:45:03] 2025-10-11 06:44:17,502 | INFO     | 
[2025-10-11 02:45:03] 2025-10-11 06:44:17,519 | INFO     | architecture information:
[2025-10-11 02:45:03] 2025-10-11 06:44:17,519 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:45:03] 2025-10-11 06:44:17,528 | INFO     | cat /etc/os-release:
[2025-10-11 02:45:03] NAME="CentOS Linux"
[2025-10-11 02:45:03] VERSION="7 (Core)"
[2025-10-11 02:45:03] ID="centos"
[2025-10-11 02:45:03] ID_LIKE="rhel fedora"
[2025-10-11 02:45:03] VERSION_ID="7"
[2025-10-11 02:45:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:45:03] ANSI_COLOR="0;31"
[2025-10-11 02:45:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:45:03] HOME_URL="https://www.centos.org/"
[2025-10-11 02:45:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:45:03] 
[2025-10-11 02:45:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:45:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:45:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:45:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:45:03] 
[2025-10-11 02:45:03] 2025-10-11 06:44:17,528 | INFO     | ***************************************
[2025-10-11 02:45:03] 2025-10-11 06:44:18,030 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 02:45:03] 2025-10-11 06:44:18,047 | INFO     | sufficient remaining disk space (166625017856 B)
[2025-10-11 02:45:03] 2025-10-11 06:44:18,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:45:03] 2025-10-11 06:44:18,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:45:03] 2025-10-11 06:44:18,048 | INFO     | update_server=False
[2025-10-11 02:45:03] 2025-10-11 06:44:18,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:45:03] 2025-10-11 06:44:18,050 | INFO     | all job control threads have been joined
[2025-10-11 02:45:03] 2025-10-11 06:44:18,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:45:03] 2025-10-11 06:44:18,286 | INFO     | aborting loop
[2025-10-11 02:45:03] 2025-10-11 06:44:18,949 | INFO     | all data control threads have been joined
[2025-10-11 02:45:03] 2025-10-11 06:44:19,053 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,055 | INFO     | [job] control thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,190 | INFO     | [job] validate thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,215 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,286 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,354 | INFO     | all payload control threads have been joined
[2025-10-11 02:45:03] 2025-10-11 06:44:19,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:45:03] 2025-10-11 06:44:19,554 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,605 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:45:03] 2025-10-11 06:44:19,834 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:19,955 | INFO     | [data] control thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:20,156 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:20,359 | INFO     | [payload] control thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:20,412 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:20,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:45:03] 2025-10-11 06:44:21,424 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:21,950 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:23,796 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:45:03] 2025-10-11 06:44:47,706 | INFO     | PID=3132755 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 02:45:03] 2025-10-11 06:44:47,706 | INFO     | .. there are 17 such processes running
[2025-10-11 02:45:03] 2025-10-11 06:44:47,707 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:45:03] 2025-10-11 06:44:47,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:45:03] 2025-10-11 06:44:47,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:45:03] 2025-10-11 06:44:56,752 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:45:03] 2025-10-11 06:44:58,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685617100608)>', '<ExcThread(monitor, started 140685109868288)>']
[2025-10-11 02:45:03] 2025-10-11 06:44:58,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:45:03] 2025-10-11 06:44:58,762 | INFO     | [monitor] control thread has ended
[2025-10-11 02:45:03] 2025-10-11 06:45:03,666 | INFO     | all workflow threads have been joined
[2025-10-11 02:45:03] 2025-10-11 06:45:03,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:45:03] 2025-10-11 06:45:03,667 | INFO     | traces error code: 0
[2025-10-11 02:45:03] 2025-10-11 06:45:03,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:45:03] 2025-10-11 06:45:03,767 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:45:03] 2025-10-11 06:45:03,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:45:03] 2025-10-11 06:45:03,771 [wrapper] pilotpid: 3132755
[2025-10-11 02:45:03] 2025-10-11 06:45:03,773 [wrapper] Pilot exit status: 0
[2025-10-11 02:45:03] 2025-10-11 06:45:03,780 [wrapper] pandaids: 6837785704
[2025-10-11 02:45:03] 2025-10-11 06:45:03,877 [wrapper] cleanup supervisor_pilot 3259007 3132756
[2025-10-11 02:45:03] 2025-10-11 06:45:03,879 [wrapper] Test setup, not cleaning
[2025-10-11 02:45:03] 2025-10-11 06:45:03,881 [wrapper] apfmon messages muted
[2025-10-11 02:45:03] 2025-10-11 06:45:03,883 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:45:03] 2025-10-11 06:45:03,885 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:45:03]  *** Error codes and diagnostics ***
[2025-10-11 02:45:03]     "exeErrorCode": 0,
[2025-10-11 02:45:03]     "exeErrorDiag": "",
[2025-10-11 02:45:03]     "pilotErrorCode": 0,
[2025-10-11 02:45:03]     "pilotErrorDiag": "",
[2025-10-11 02:45:03]  *** Listing of results directory ***
[2025-10-11 02:45:03] total 407908
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:48 pilot3.tar.gz
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:58 queuedata.json
[2025-10-11 02:45:03] -rwx------. 1 boincer umatlas     36292 Oct 10 17:00 runpilot2-wrapper.sh
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas       100 Oct 11 02:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:45:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 02:08 run_atlas
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas       105 Oct 11 02:08 job.xml
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas 220803603 Oct 11 02:08 EVNT.46676267._001830.pool.root.1
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 02:08 start_atlas.sh
[2025-10-11 02:45:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 02:08 shared
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 02:08 input.tar.gz
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas         0 Oct 11 02:08 boinc_lockfile
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 02:08 pandaJob.out
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas    975533 Oct 11 02:08 agis_schedconf.cvmfs.json
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas   1560580 Oct 11 02:08 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:45:03] drwx------. 5 boincer umatlas      4096 Oct 11 02:08 pilot3
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas      7163 Oct 11 02:39 init_data.xml
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas 191609433 Oct 11 02:43 HITS.46676269._045261.pool.root.1
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas       529 Oct 11 02:43 boinc_task_state.xml
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas      1028 Oct 11 02:44 memory_monitor_summary.json
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas    349110 Oct 11 02:44 log.46676269._045261.job.log.tgz.1
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas      7767 Oct 11 02:44 heartbeat.json
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas        95 Oct 11 02:44 pilot_heartbeat.json
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 02:44 boinc_mmap_file
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas        27 Oct 11 02:44 wrapper_checkpoint.txt
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas      4825 Oct 11 02:45 pilotlog.txt
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas    340997 Oct 11 02:45 log.46676269._045261.job.log.1
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas       357 Oct 11 02:45 output.list
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas       620 Oct 11 02:45 runtime_log
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas    706560 Oct 11 02:45 result.tar.gz
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas       649 Oct 11 02:45 TuCODmmOZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGSeNDm87cqMm.diag
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 02:45 runtime_log.err
[2025-10-11 02:45:03] -rw-r--r--. 1 boincer umatlas     22043 Oct 11 02:45 stderr.txt
[2025-10-11 02:45:03] HITS file was successfully produced:
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas 191609433 Oct 11 02:43 shared/HITS.pool.root.1
[2025-10-11 02:45:03]  *** Contents of shared directory: ***
[2025-10-11 02:45:03] total 404024
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas 220803603 Oct 11 02:08 ATLAS.root_0
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 02:08 start_atlas.sh
[2025-10-11 02:45:03] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 02:08 input.tar.gz
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas 191609433 Oct 11 02:43 HITS.pool.root.1
[2025-10-11 02:45:03] -rw-------. 1 boincer umatlas    706560 Oct 11 02:45 result.tar.gz
02:45:05 (3127941): run_atlas exited; CPU time 21174.647099
02:45:05 (3127941): called boinc_finish(0)

</stderr_txt>
]]>

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