Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:20 (2373595): wrapper (7.7.26015): starting
00:25:20 (2373595): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:25:20] Arguments: --nthreads 12
[2025-10-12 00:25:20] Threads: 12
[2025-10-12 00:25:20] Checking for CVMFS
[2025-10-12 00:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:25:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:25:20] 2.13.2.0 9461 14989 95300 151599 2 57 6812182 46080001 922 130560 0 35063611 99.996 542766 24796 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 00:25:20] CVMFS is ok
[2025-10-12 00:25:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:25:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:25:20] Further information can be found at the LHC@home message board.
[2025-10-12 00:25:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:25:20] Checking for apptainer binary...
[2025-10-12 00:25:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:25:20] Running /usr/bin/apptainer --version
[2025-10-12 00:25:21] apptainer version 1.4.2-1.el9
[2025-10-12 00:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:25:21] minis01.farm.particle.cz
[2025-10-12 00:25:21] apptainer works
[2025-10-12 00:25:21] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:25:21] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:25:21] Starting ATLAS job with PandaID=6837732764
[2025-10-12 00:25:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:18:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:18:40]  status=None
[2025-10-12 01:18:40]  status_code=0
[2025-10-12 01:18:40]  storage_token=
[2025-10-12 01:18:40]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6837732764/log.46676269._044664.job.log.tgz.1
[2025-10-12 01:18:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/ab/log.46676269._044664.job.log.tgz.1
[2025-10-12 01:18:40]  workdir=None
[2025-10-12 01:18:40] ]
[2025-10-12 01:18:40] 2025-10-11 23:18:12,476 | INFO     | transferring file log.46676269._044664.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6837732764/log.46676269._044664.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 01:18:40] 2025-10-11 23:18:12,476 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6837732764/log.46676269._044664.job.log.tgz.1 /var/lib/boinc/slots/4/log.46676269._044664.job
[2025-10-12 01:18:40] 2025-10-11 23:18:12,494 | INFO     | adding to output.list: log.46676269._044664.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/ab/log.46676269._044664.job.log.tg
[2025-10-12 01:18:40] 2025-10-11 23:18:12,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 01:18:40] 2025-10-11 23:18:12,495 | INFO     | summary of transferred files:
[2025-10-12 01:18:40] 2025-10-11 23:18:12,495 | INFO     |  -- lfn=log.46676269._044664.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 01:18:40] 2025-10-11 23:18:12,495 | INFO     | stage-out finished correctly
[2025-10-12 01:18:40] 2025-10-11 23:18:13,124 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 01:18:40] 2025-10-11 23:18:13,150 | INFO     | time since job start (3164s) is within the limit (172800.0s)
[2025-10-12 01:18:40] 2025-10-11 23:18:13,161 | INFO     | 3165s have passed since pilot start - server update state is 'RUNNING'
[2025-10-12 01:18:40] 2025-10-11 23:18:13,201 | INFO     | job 6837732764 has state=finished
[2025-10-12 01:18:40] 2025-10-11 23:18:13,202 | INFO     | preparing for final server update for job 6837732764 in state='finished'
[2025-10-12 01:18:40] 2025-10-11 23:18:13,202 | INFO     | this job has now completed (state=finished)
[2025-10-12 01:18:40] 2025-10-11 23:18:13,202 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 01:18:40] 2025-10-11 23:18:13,203 | INFO     | log transfer has been attempted: DONE
[2025-10-12 01:18:40] 2025-10-11 23:18:13,203 | INFO     | job 6837732764 has finished - writing final server update
[2025-10-12 01:18:40] 2025-10-11 23:18:13,203 | INFO     | total number of processed events: 400 (read)
[2025-10-12 01:18:40] 2025-10-11 23:18:13,204 | INFO     | executing command: lscpu
[2025-10-12 01:18:40] 2025-10-11 23:18:13,237 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:18:40] 2025-10-11 23:18:13,799 | WARNING  | process 2384765 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 01:18:40] 2025-10-11 23:18:13,800 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6837732764/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:18:40] 2025-10-11 23:18:13,943 | INFO     | number of running child processes to parent process 2384765: 1
[2025-10-12 01:18:40] 2025-10-11 23:18:13,943 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:18:40] 2025-10-11 23:18:15,176 | INFO     | time since job start (3166s) is within the limit (172800.0s)
[2025-10-12 01:18:40] 2025-10-11 23:18:16,361 | INFO     | PID=2377470 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:18:40] 2025-10-11 23:18:16,361 | INFO     | .. there are 2 such processes running
[2025-10-12 01:18:40] 2025-10-11 23:18:16,446 | INFO     | monitor loop #240: job 0:6837732764 is in state 'finished'
[2025-10-12 01:18:40] 2025-10-11 23:18:16,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:40] 2025-10-11 23:18:16,916 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:18:40] 2025-10-11 23:18:16,923 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2735.256625
[2025-10-12 01:18:40] 2025-10-11 23:18:16,929 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6837732764/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:18:40] 2025-10-11 23:18:16,930 | INFO     | extracted standard info from prmon json
[2025-10-12 01:18:40] 2025-10-11 23:18:16,930 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:18:40] 2025-10-11 23:18:16,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:18:40] 2025-10-11 23:18:16,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:18:40] 2025-10-11 23:18:16,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:18:40] 2025-10-11 23:18:16,932 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:18:40] 2025-10-11 23:18:16,933 | INFO     | sum of square deviations: 28242390.0
[2025-10-12 01:18:40] 2025-10-11 23:18:16,933 | INFO     | sum of deviations: -2638179606.0000005
[2025-10-12 01:18:40] 2025-10-11 23:18:16,933 | INFO     | mean x: 1760223201.0
[2025-10-12 01:18:40] 2025-10-11 23:18:16,933 | INFO     | mean y: 3009379.3777777776
[2025-10-12 01:18:40] 2025-10-11 23:18:16,933 | INFO     | -- intersect: 164429070732.05505
[2025-10-12 01:18:40] 2025-10-11 23:18:16,934 | INFO     | intersect: 164429070732.05505
[2025-10-12 01:18:40] 2025-10-11 23:18:16,934 | INFO     | chi2: 0.016905993262618952
[2025-10-12 01:18:40] 2025-10-11 23:18:16,934 | INFO     | -- intersect: 164429070732.05505
[2025-10-12 01:18:40] 2025-10-11 23:18:16,934 | INFO     | current memory leak: -93.41 B/s (using 45 data points, chi2=0.02)
[2025-10-12 01:18:40] 2025-10-11 23:18:16,934 | INFO     | could have reported an average CPU frequency of 2750 MHz (5 samples)
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | ..............................
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . Timing measurements:
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . get job = 0 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . initial setup = 1 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . payload setup = 5 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . stage-in = 0 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . payload execution = 3137 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . stage-out = 0 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,935 | INFO     | . log creation = 0 s
[2025-10-12 01:18:40] 2025-10-11 23:18:16,936 | INFO     | ..............................
[2025-10-12 01:18:40] 2025-10-11 23:18:17,361 | INFO     | time since job start (3168s) is within the limit (172800.0s)
[2025-10-12 01:18:40] 2025-10-11 23:18:17,435 | INFO     | 
[2025-10-12 01:18:40] 2025-10-11 23:18:17,435 | INFO     | job summary report
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | --------------------------------------------------
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | PanDA job id: 6837732764
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | task id: 46676269
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | errors: (none)
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | pilot state: finished 
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | transexitcode: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | exeerrorcode: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | exeerrordiag: 
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | exitcode: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | exitmsg: OK
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | cpuconsumptiontime: 33597 s
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | nevents: 400
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | neventsw: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | pid: 2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | pgrp: 2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:17,436 | INFO     | corecount: 12
[2025-10-12 01:18:40] 2025-10-11 23:18:17,437 | INFO     | event service: False
[2025-10-12 01:18:40] 2025-10-11 23:18:17,437 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 3146: 2374650, 3148: 2383648, 3149: 2383832, 3153: 2384058}
[2025-10-12 01:18:40] 2025-10-11 23:18:17,437 | INFO     | --------------------------------------------------
[2025-10-12 01:18:40] 2025-10-11 23:18:17,437 | INFO     | 
[2025-10-12 01:18:40] 2025-10-11 23:18:17,437 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 01:18:40] 2025-10-11 23:18:17,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | job 6837732764 has completed (purged errors)
[2025-10-12 01:18:40] 2025-10-11 23:18:17,456 | INFO     | overall cleanup function is called
[2025-10-12 01:18:40] 2025-10-11 23:18:18,465 | INFO     | --- collectZombieJob: --- 10, [2384765]
[2025-10-12 01:18:40] 2025-10-11 23:18:18,466 | INFO     | zombie collector waiting for pid 2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:18,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:18:40] 2025-10-11 23:18:18,466 | INFO     | collected zombie processes
[2025-10-12 01:18:40] 2025-10-11 23:18:18,466 | INFO     | will attempt to kill all subprocesses of pid=2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:18,609 | INFO     | process IDs to be killed: [2384765] (in reverse order)
[2025-10-12 01:18:40] 2025-10-11 23:18:18,662 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:18:40] 2025-10-11 23:18:18,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:18:40] 2025-10-11 23:18:18,667 | INFO     | did not find any defunct processes belonging to 2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:18,671 | INFO     | did not find any defunct processes belonging to 2384765
[2025-10-12 01:18:40] 2025-10-11 23:18:18,672 | INFO     | ready for new job
[2025-10-12 01:18:40] 2025-10-11 23:18:18,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:18:40] 2025-10-11 23:18:18,673 | INFO     | ***************************************
[2025-10-12 01:18:40] 2025-10-11 23:18:18,673 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:18:40] 2025-10-11 23:18:18,673 | INFO     | ***************************************
[2025-10-12 01:18:40] 2025-10-11 23:18:18,673 | INFO     | 
[2025-10-12 01:18:40] 2025-10-11 23:18:18,675 | INFO     | architecture information:
[2025-10-12 01:18:40] 2025-10-11 23:18:18,675 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:18:40] 2025-10-11 23:18:18,689 | INFO     | cat /etc/os-release:
[2025-10-12 01:18:40] NAME="CentOS Linux"
[2025-10-12 01:18:40] VERSION="7 (Core)"
[2025-10-12 01:18:40] ID="centos"
[2025-10-12 01:18:40] ID_LIKE="rhel fedora"
[2025-10-12 01:18:40] VERSION_ID="7"
[2025-10-12 01:18:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:18:40] ANSI_COLOR="0;31"
[2025-10-12 01:18:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:18:40] HOME_URL="https://www.centos.org/"
[2025-10-12 01:18:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:18:40] 
[2025-10-12 01:18:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:18:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:18:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:18:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:18:40] 
[2025-10-12 01:18:40] 2025-10-11 23:18:18,689 | INFO     | ***************************************
[2025-10-12 01:18:40] 2025-10-11 23:18:19,192 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 01:18:40] 2025-10-11 23:18:19,207 | INFO     | sufficient remaining disk space (65396539392 B)
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | INFO     | update_server=False
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 01:18:40] 2025-10-11 23:18:19,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:18:40] 2025-10-11 23:18:19,209 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:18:40] 2025-10-11 23:18:19,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:18:40] 2025-10-11 23:18:19,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:18:40] 2025-10-11 23:18:19,865 | INFO     | all data control threads have been joined
[2025-10-12 01:18:40] 2025-10-11 23:18:19,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:18:40] 2025-10-11 23:18:19,955 | INFO     | aborting loop
[2025-10-12 01:18:40] 2025-10-11 23:18:20,159 | INFO     | all payload control threads have been joined
[2025-10-12 01:18:40] 2025-10-11 23:18:20,213 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:20,263 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:20,411 | INFO     | all job control threads have been joined
[2025-10-12 01:18:40] 2025-10-11 23:18:20,513 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:20,519 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:20,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:18:40] 2025-10-11 23:18:20,871 | INFO     | [data] control thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:20,961 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,165 | INFO     | [payload] control thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,187 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,191 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,417 | INFO     | [job] control thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,455 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:21,656 | INFO     | [job] validate thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:22,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:18:40] 2025-10-11 23:18:22,582 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:23,024 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:23,215 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:30,043 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:18:40] 2025-10-11 23:18:31,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:18:40] 2025-10-11 23:18:33,805 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:18:40] 2025-10-11 23:18:34,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974266664768)>', '<ExcThread(monitor, started 139973646870272)>']
[2025-10-12 01:18:40] 2025-10-11 23:18:35,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:18:40] 2025-10-11 23:18:35,288 | INFO     | [monitor] control thread has ended
[2025-10-12 01:18:40] 2025-10-11 23:18:39,912 | INFO     | all workflow threads have been joined
[2025-10-12 01:18:40] 2025-10-11 23:18:39,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:18:40] 2025-10-11 23:18:39,912 | INFO     | traces error code: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:39,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:18:40] 2025-10-11 23:18:40,006 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:18:40] 2025-10-11 23:18:40,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:18:40] 2025-10-11 23:18:40,012 [wrapper] pilotpid: 2377470
[2025-10-12 01:18:40] 2025-10-11 23:18:40,014 [wrapper] Pilot exit status: 0
[2025-10-12 01:18:40] 2025-10-11 23:18:40,025 [wrapper] pandaids: 6837732764
[2025-10-12 01:18:40] 2025-10-11 23:18:40,061 [wrapper] cleanup supervisor_pilot 2435768 2377471
[2025-10-12 01:18:40] 2025-10-11 23:18:40,064 [wrapper] Test setup, not cleaning
[2025-10-12 01:18:40] 2025-10-11 23:18:40,067 [wrapper] apfmon messages muted
[2025-10-12 01:18:40] 2025-10-11 23:18:40,069 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:18:40] 2025-10-11 23:18:40,072 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:18:40]  *** Error codes and diagnostics ***
[2025-10-12 01:18:40]     "exeErrorCode": 0,
[2025-10-12 01:18:40]     "exeErrorDiag": "",
[2025-10-12 01:18:40]     "pilotErrorCode": 0,
[2025-10-12 01:18:40]     "pilotErrorDiag": "",
[2025-10-12 01:18:40]  *** Listing of results directory ***
[2025-10-12 01:18:40] total 412504
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc    557409 Oct 10 22:32 pilot3.tar.gz
[2025-10-12 01:18:40] -rwx------. 1 boinc boinc     36292 Oct 10 22:34 runpilot2-wrapper.sh
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc      5112 Oct 10 22:34 queuedata.json
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc       100 Oct 12 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:18:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 00:25 run_atlas
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc       105 Oct 12 00:25 job.xml
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc      6518 Oct 12 00:25 init_data.xml
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc 219611811 Oct 12 00:25 EVNT.46676267._001807.pool.root.1
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 00:25 start_atlas.sh
[2025-10-12 01:18:40] drwxrwx--x. 2 boinc boinc      4096 Oct 12 00:25 shared
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc    569673 Oct 12 00:25 input.tar.gz
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc         0 Oct 12 00:25 boinc_lockfile
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc      2550 Oct 12 00:25 pandaJob.out
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc    975520 Oct 12 00:25 agis_schedconf.cvmfs.json
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc   1560580 Oct 12 00:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:18:40] drwx------. 5 boinc boinc      4096 Oct 12 00:25 pilot3
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc 197163869 Oct 12 01:17 HITS.46676269._044664.pool.root.1
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc       529 Oct 12 01:18 boinc_task_state.xml
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc      1017 Oct 12 01:18 memory_monitor_summary.json
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc        95 Oct 12 01:18 pilot_heartbeat.json
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc    374438 Oct 12 01:18 log.46676269._044664.job.log.tgz.1
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc      7782 Oct 12 01:18 heartbeat.json
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc      8192 Oct 12 01:18 boinc_mmap_file
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc        27 Oct 12 01:18 wrapper_checkpoint.txt
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc      4624 Oct 12 01:18 pilotlog.txt
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc    487474 Oct 12 01:18 log.46676269._044664.job.log.1
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc       357 Oct 12 01:18 output.list
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc       620 Oct 12 01:18 runtime_log
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc    880640 Oct 12 01:18 result.tar.gz
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc      8750 Oct 12 01:18 runtime_log.err
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc       662 Oct 12 01:18 FFVLDmzzYR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRXQMDmpeioam.diag
[2025-10-12 01:18:40] -rw-r--r--. 1 boinc boinc     22045 Oct 12 01:18 stderr.txt
[2025-10-12 01:18:40] HITS file was successfully produced:
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc 197163869 Oct 12 01:17 shared/HITS.pool.root.1
[2025-10-12 01:18:40]  *** Contents of shared directory: ***
[2025-10-12 01:18:40] total 408452
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc 219611811 Oct 12 00:25 ATLAS.root_0
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 00:25 start_atlas.sh
[2025-10-12 01:18:40] -rw-r--r--. 2 boinc boinc    569673 Oct 12 00:25 input.tar.gz
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc 197163869 Oct 12 01:17 HITS.pool.root.1
[2025-10-12 01:18:40] -rw-------. 1 boinc boinc    880640 Oct 12 01:18 result.tar.gz
01:18:41 (2373595): run_atlas exited; CPU time 33622.927647
01:18:41 (2373595): called boinc_finish(0)

</stderr_txt>
]]>

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