Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 01:43:08 (1749920): vboxwrapper version 26210
2025-10-11 01:43:08 (1749920): BOINC client version: 8.2.4
2025-10-11 01:43:09 (1749920): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-11 01:43:09 (1749920): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 01:43:09 (1749920): Create VM. (boinc_4e06ad58ee76781f, slot#0)
2025-10-11 01:43:10 (1749920): Setting Memory Size for VM. (4200MB)
2025-10-11 01:43:10 (1749920): Setting CPU Count for VM. (2)
2025-10-11 01:43:10 (1749920): Setting Chipset Options for VM.
2025-10-11 01:43:11 (1749920): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 01:43:11 (1749920): Setting Boot Options for VM.
2025-10-11 01:43:11 (1749920): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 01:43:12 (1749920): Enabling VM Network Access.
2025-10-11 01:43:12 (1749920): Disabling USB Support for VM.
2025-10-11 01:43:12 (1749920): Disabling COM Port Support for VM.
2025-10-11 01:43:13 (1749920): Disabling LPT Port Support for VM.
2025-10-11 01:43:13 (1749920): Disabling Audio Support for VM.
2025-10-11 01:43:13 (1749920): Disabling Clipboard Support for VM.
2025-10-11 01:43:13 (1749920): Disabling Drag and Drop Support for VM.
2025-10-11 01:43:14 (1749920): Adding storage controller(s) to VM.
2025-10-11 01:43:14 (1749920): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 01:43:16 (1749920): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 01:43:17 (1749920): forwarding host port 54487 to guest port 80
2025-10-11 01:43:17 (1749920): Enabling remote desktop for VM.
2025-10-11 01:43:17 (1749920): Required extension pack not installed, remote desktop not enabled.
2025-10-11 01:43:17 (1749920): Enabling shared directory for VM.
2025-10-11 01:43:18 (1749920): Starting VM using VBoxManage interface. (boinc_4e06ad58ee76781f, slot#0)
2025-10-11 01:43:19 (1749920): Successfully started VM. (PID = '1750444')
2025-10-11 01:43:19 (1749920): Reporting VM Process ID to BOINC.
2025-10-11 01:43:19 (1749920): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-11 01:43:19 (1749920): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 01:43:19 (1749920): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 01:43:19 (1749920): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 01:43:19 (1749920): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 01:43:19 (1749920): Detected: Web Application Enabled (http://localhost:54487)
2025-10-11 01:43:19 (1749920): Preference change detected
2025-10-11 01:43:19 (1749920): Setting CPU throttle for VM. (100%)
2025-10-11 01:43:19 (1749920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 01:43:21 (1749920): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 01:43:21 (1749920): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 01:43:24 (1749920): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 01:43:24 (1749920): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 01:43:24 (1749920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 01:43:31 (1749920): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 01:43:31 (1749920): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 01:43:39 (1749920): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000165 main     Log opened 2025-10-11T05:43:37.411309000Z
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000265 main     OS Product: Linux
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000290 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000307 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000323 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000324 main     Process ID: 1263
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.000324 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 01:43:39 (1749920): Guest Log: 00:00:00.002198 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 01:43:39 (1749920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 01:43:39 (1749920): Guest Log: [INFO] Mounting shared directory
2025-10-11 01:43:39 (1749920): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 01:43:43 (1749920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 01:43:43 (1749920): Guest Log: [INFO] Detected branch: prod
2025-10-11 01:43:43 (1749920): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 01:43:43 (1749920): Guest Log: Copying input files
2025-10-11 01:43:44 (1749920): Guest Log: Copied input files into RunAtlas.
2025-10-11 01:43:44 (1749920): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 01:43:44 (1749920): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 01:43:44 (1749920): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 01:43:44 (1749920): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 01:43:52 (1749920): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 01:43:53 (1749920): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 01:43:53 (1749920): Guest Log: 2.6.3.0 1537 0 32108 151573 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 01:43:54 (1749920): Guest Log: copied the webapp to /var/www
2025-10-11 01:43:54 (1749920): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-11 01:43:54 (1749920): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-11 01:43:54 (1749920): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 01:43:54 (1749920): Guest Log:  *** Starting ATLAS job. (PandaID=6837875517 taskID=46676269) ***
2025-10-11 01:58:37 (1749920): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 01:58:56 (1749920): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 03:22:43 (1749920): Status Report: Elapsed Time: '6000.000000'
2025-10-11 03:22:43 (1749920): Status Report: CPU Time: '10271.990000'
2025-10-11 05:01:46 (1749920): Status Report: Elapsed Time: '12000.000000'
2025-10-11 05:01:46 (1749920): Status Report: CPU Time: '21015.240000'
2025-10-11 06:00:02 (1749920): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 21:00:01 (1749920): Preference change detected
2025-10-11 21:00:01 (1749920): Setting CPU throttle for VM. (100%)
2025-10-11 21:00:02 (1749920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 21:00:02 (1749920): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 21:00:09 (1749920): Guest Log: 04:16:18.210403 timesync vgsvcTimeSyncWorker: Radical host time change: 54 009 835 000 000ns (HostNow=1 760 230 808 861 000 000 ns HostLast=1 760 176 799 026 000 000 ns)
2025-10-11 21:00:19 (1749920): Guest Log: 04:16:28.213830 timesync vgsvcTimeSyncWorker: Radical guest time change: 54 023 301 515 000ns (GuestNow=1 760 230 818 893 734 000 ns GuestLast=1 760 176 795 592 219 000 ns fSetTimeLastLoop=true )
2025-10-11 21:40:50 (1749920): Status Report: Elapsed Time: '18000.000000'
2025-10-11 21:40:50 (1749920): Status Report: CPU Time: '31795.900000'
2025-10-11 23:19:53 (1749920): Status Report: Elapsed Time: '24000.000000'
2025-10-11 23:19:53 (1749920): Status Report: CPU Time: '42704.510000'
2025-10-11 23:31:20 (1749920): Guest Log:  *** Job finished ***
2025-10-11 23:31:20 (1749920): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:30:26,804 | INFO     | job.realtimelogging is not enabled
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:30:27,812 | INFO     | [payload] run_realtimelog thread has finished
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:13,480 | INFO     | [monitor] cgroup control has ended
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:14,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918866257728)>', '<ExcThread(monitor, started 139918139447040)>']
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:14,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:14,579 | INFO     | [monitor] control thread has ended
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,085 | INFO     | all workflow threads have been joined
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,085 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,085 | INFO     | traces error code: 0
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,264 [wrapper] ==== pilot stdout END ====
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,272 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,279 [wrapper] pilotpid: 5915
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,284 [wrapper] Pilot exit status: 0
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,363 [wrapper] pandaids: 6837875517
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,396 [wrapper] cleanup supervisor_pilot 31444 5916
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,401 [wrapper] Test setup, not cleaning
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,405 [wrapper] apfmon messages muted
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,411 [wrapper] ==== wrapper stdout END ====
2025-10-11 23:31:20 (1749920): Guest Log: 2025-10-12 03:31:19,416 [wrapper] ==== wrapper stderr END ====
2025-10-11 23:31:20 (1749920): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 23:31:20 (1749920): Guest Log:     "exeErrorCode": 0,
2025-10-11 23:31:20 (1749920): Guest Log:     "exeErrorDiag": "",
2025-10-11 23:31:20 (1749920): Guest Log:     "pilotErrorCode": 0,
2025-10-11 23:31:20 (1749920): Guest Log:     "pilotErrorDiag": "",
2025-10-11 23:31:20 (1749920): Guest Log:  *** Listing of results directory ***
2025-10-11 23:31:20 (1749920): Guest Log: total 197940
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 00:00 pilot3.tar.gz
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 00:11 queuedata.json
2025-10-11 23:31:20 (1749920): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 00:12 runpilot2-wrapper.sh
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas      5987 Oct 11 05:43 init_data.xml
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 11 05:43 start_atlas.sh
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas    569683 Oct 11 05:43 input.tar.gz
2025-10-11 23:31:20 (1749920): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 05:43 EVNT.46676267._001917.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 05:43 pandaJob.out
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas    975533 Oct 11 05:44 agis_schedconf.cvmfs.json
2025-10-11 23:31:20 (1749920): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 05:44 pilot3
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas 191325092 Oct 12 03:29 HITS.46676269._047471.pool.root.1
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 12 03:29 memory_monitor_summary.json
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 03:29 agis_ddmendpoints.agis.ALL.json
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas    497655 Oct 12 03:29 log.46676269._047471.job.log.tgz.1
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas        98 Oct 12 03:30 pilot_heartbeat.json
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas      7820 Oct 12 03:30 heartbeat.json
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 12 03:31 pilotlog.txt
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas   3268428 Oct 12 03:31 log.46676269._047471.job.log.1
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 03:31 output.list
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 03:31 runtime_log
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas   3788800 Oct 12 03:31 result.tar.gz
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 atlas atlas      8664 Oct 12 03:31 runtime_log.err
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas       666 Oct 12 03:31 fDWLDmjOcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7oeNDmqDGpom.diag
2025-10-11 23:31:20 (1749920): Guest Log: Looking for outputfile HITS.46676269._047471.pool.root.1
2025-10-11 23:31:20 (1749920): Guest Log: HITS file was successfully produced
2025-10-11 23:31:20 (1749920): Guest Log: -rw-------. 1 atlas atlas 191325092 Oct 12 03:29 /home/atlas/RunAtlas/HITS.46676269._047471.pool.root.1
2025-10-11 23:31:20 (1749920): Guest Log: Successfully finished the ATLAS job!
2025-10-11 23:31:20 (1749920): Guest Log: Copying the results back to the shared directory!
2025-10-11 23:31:20 (1749920): Guest Log:  *** Contents of shared directory: ***
2025-10-11 23:31:20 (1749920): Guest Log: total 222104
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 root root 223039858 Oct 11 05:43 ATLAS.root_0
2025-10-11 23:31:20 (1749920): Guest Log: -rw-rw-r--. 1 root root      5987 Oct 11 05:43 init_data.xml
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 root root    569683 Oct 11 05:43 input.tar.gz
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 root root   3788800 Oct 12 03:31 result.tar.gz
2025-10-11 23:31:20 (1749920): Guest Log: -rw-r--r--. 1 root root     15120 Oct 11 05:43 start_atlas.sh
2025-10-11 23:31:20 (1749920): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 23:31:20 (1749920): VM Completion File Detected.
2025-10-11 23:31:20 (1749920): Powering off VM.
2025-10-11 23:31:21 (1749920): Successfully stopped VM.
2025-10-11 23:31:21 (1749920): Deregistering VM. (boinc_4e06ad58ee76781f, slot#0)
2025-10-11 23:31:21 (1749920): Removing network bandwidth throttle group from VM.
2025-10-11 23:31:21 (1749920): Removing VM from VirtualBox.
2025-10-11 23:31:27 (1749920): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN