Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:36:57 (3295445): wrapper (7.7.26015): starting
07:36:57 (3295445): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:36:57] Arguments: --nthreads 12
[2025-10-11 07:36:57] Threads: 12
[2025-10-11 07:36:57] Checking for CVMFS
[2025-10-11 07:36:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:37:00] 2.13.2.0 3295657 0 25384 151573 3 1 1789426 4096001 0 130560 0 0 0.000 1291 1340 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:37:00] CVMFS is ok
[2025-10-11 07:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:37:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:37:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:37:00] Further information can be found at the LHC@home message board.
[2025-10-11 07:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:37:00] Checking for apptainer binary...
[2025-10-11 07:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:37:00] Running /usr/bin/apptainer --version
[2025-10-11 07:37:00] apptainer version 1.4.3
[2025-10-11 07:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:37:00] 9628
[2025-10-11 07:37:00] apptainer works
[2025-10-11 07:37:00] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:37:00] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:37:00] Starting ATLAS job with PandaID=6837875560
[2025-10-11 07:37:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:08:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:08:07] 2025-10-11 13:07:10,256 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 15:08:07] 2025-10-11 13:07:10,257 | INFO     | found 9 cores (9 cores per socket, 1 socket) , CPU MHz: 2396.3980000000006
[2025-10-11 15:08:07] 2025-10-11 13:07:10,259 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837875560/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,261 | INFO     | extracted standard info from prmon json
[2025-10-11 15:08:07] 2025-10-11 13:07:10,261 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:08:07] 2025-10-11 13:07:10,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:08:07] 2025-10-11 13:07:10,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:08:07] 2025-10-11 13:07:10,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:08:07] 2025-10-11 13:07:10,275 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:08:07] 2025-10-11 13:07:10,275 | INFO     | sum of square deviations: 26775919043.773754
[2025-10-11 15:08:07] 2025-10-11 13:07:10,282 | INFO     | sum of deviations: 110402837725.54745
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | mean x: 1760174508.3303168
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | mean y: 2646899.1606334844
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | -- intersect: -7254928846.200185
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | intersect: -7254928846.200185
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | chi2: 1.4399027287449655
[2025-10-11 15:08:07] 2025-10-11 13:07:10,283 | INFO     | sum of square deviations: 25877586222.786846
[2025-10-11 15:08:07] 2025-10-11 13:07:10,289 | INFO     | sum of deviations: 108455582993.96793
[2025-10-11 15:08:07] 2025-10-11 13:07:10,290 | INFO     | mean x: 1760174355.839817
[2025-10-11 15:08:07] 2025-10-11 13:07:10,290 | INFO     | mean y: 2646568.599542334
[2025-10-11 15:08:07] 2025-10-11 13:07:10,290 | INFO     | -- intersect: -7374422308.309046
[2025-10-11 15:08:07] 2025-10-11 13:07:10,290 | INFO     | intersect: -7374422308.309046
[2025-10-11 15:08:07] 2025-10-11 13:07:10,290 | INFO     | chi2: 1.4400343213811415
[2025-10-11 15:08:07] 2025-10-11 13:07:10,294 | INFO     | current chi2=1.4400343213811415 (change=-0.009138994846597172 %)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,294 | INFO     | right removable region: 436
[2025-10-11 15:08:07] 2025-10-11 13:07:10,295 | INFO     | sum of square deviations: 25877362352.786846
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | sum of deviations: 37501939399.02058
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | mean x: 1760174660.839817
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | mean y: 2659208.757437071
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | -- intersect: -2548217598.646294
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | intersect: -2548217598.646294
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | chi2: 0.0031810085702187033
[2025-10-11 15:08:07] 2025-10-11 13:07:10,297 | INFO     | current chi2=0.0031810085702187033 (change=99.77908170415155 %)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,298 | INFO     | sum of square deviations: 24999158037.91667
[2025-10-11 15:08:07] 2025-10-11 13:07:10,304 | INFO     | sum of deviations: 35908013900.86107
[2025-10-11 15:08:07] 2025-10-11 13:07:10,304 | INFO     | mean x: 1760174813.3472223
[2025-10-11 15:08:07] 2025-10-11 13:07:10,304 | INFO     | mean y: 2659484.800925926
[2025-10-11 15:08:07] 2025-10-11 13:07:10,304 | INFO     | -- intersect: -2525600929.800013
[2025-10-11 15:08:07] 2025-10-11 13:07:10,304 | INFO     | intersect: -2525600929.800013
[2025-10-11 15:08:07] 2025-10-11 13:07:10,305 | INFO     | chi2: 0.003071912528792629
[2025-10-11 15:08:07] 2025-10-11 13:07:10,305 | INFO     | current chi2=0.003071912528792629 (change=3.429605391430104 %)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,305 | INFO     | left removable region: 20
[2025-10-11 15:08:07] 2025-10-11 13:07:10,305 | INFO     | sum of square deviations: 22323151044.190098
[2025-10-11 15:08:07] 2025-10-11 13:07:10,311 | INFO     | sum of deviations: 34896491230.18269
[2025-10-11 15:08:07] 2025-10-11 13:07:10,311 | INFO     | mean x: 1760174935.3629808
[2025-10-11 15:08:07] 2025-10-11 13:07:10,311 | INFO     | mean y: 2659202.3365384615
[2025-10-11 15:08:07] 2025-10-11 13:07:10,311 | INFO     | -- intersect: -2748920495.0766573
[2025-10-11 15:08:07] 2025-10-11 13:07:10,311 | INFO     | intersect: -2748920495.0766573
[2025-10-11 15:08:07] 2025-10-11 13:07:10,312 | INFO     | chi2: 0.002387285466876198
[2025-10-11 15:08:07] 2025-10-11 13:07:10,312 | INFO     | -- intersect: -2748920495.0766573
[2025-10-11 15:08:07] 2025-10-11 13:07:10,312 | INFO     | current memory leak: 1.56 B/s (using 416 data points, chi2=0.00)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | could have reported an average CPU frequency of 2396 MHz (18 samples)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | ..............................
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . Timing measurements:
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . get job = 0 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . initial setup = 1 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . payload setup = 4 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . stage-in = 0 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . payload execution = 26956 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . stage-out = 1 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | . log creation = 0 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,313 | INFO     | ..............................
[2025-10-11 15:08:07] 2025-10-11 13:07:10,418 | INFO     | 
[2025-10-11 15:08:07] 2025-10-11 13:07:10,418 | INFO     | job summary report
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | --------------------------------------------------
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | PanDA job id: 6837875560
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | task id: 46676269
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | errors: (none)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | pilot state: finished 
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | transexitcode: 0
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | exeerrorcode: 0
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | exeerrordiag: 
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | exitcode: 0
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | exitmsg: OK
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | cpuconsumptiontime: 26489 s
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | nevents: 400
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | neventsw: 0
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | pid: 3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | pgrp: 3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | corecount: 12
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | event service: False
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 26964: 2386235, 26967: 2395233, 26970: 2395289, 26981: 2395611}
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | --------------------------------------------------
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | 
[2025-10-11 15:08:07] 2025-10-11 13:07:10,419 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-11 15:08:07] 2025-10-11 13:07:10,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | job 6837875560 has completed (purged errors)
[2025-10-11 15:08:07] 2025-10-11 13:07:10,466 | INFO     | overall cleanup function is called
[2025-10-11 15:08:07] 2025-10-11 13:07:11,478 | INFO     | --- collectZombieJob: --- 10, [3322812]
[2025-10-11 15:08:07] 2025-10-11 13:07:11,478 | INFO     | zombie collector waiting for pid 3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:11,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:08:07] 2025-10-11 13:07:11,479 | INFO     | collected zombie processes
[2025-10-11 15:08:07] 2025-10-11 13:07:11,479 | INFO     | will attempt to kill all subprocesses of pid=3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:11,619 | INFO     | process IDs to be killed: [3322812] (in reverse order)
[2025-10-11 15:08:07] 2025-10-11 13:07:11,696 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:08:07] 2025-10-11 13:07:11,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:08:07] 2025-10-11 13:07:11,699 | INFO     | did not find any defunct processes belonging to 3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:11,705 | INFO     | did not find any defunct processes belonging to 3322812
[2025-10-11 15:08:07] 2025-10-11 13:07:11,706 | INFO     | ready for new job
[2025-10-11 15:08:07] 2025-10-11 13:07:11,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:08:07] 2025-10-11 13:07:11,714 | INFO     | ***************************************
[2025-10-11 15:08:07] 2025-10-11 13:07:11,714 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:08:07] 2025-10-11 13:07:11,714 | INFO     | ***************************************
[2025-10-11 15:08:07] 2025-10-11 13:07:11,714 | INFO     | 
[2025-10-11 15:08:07] 2025-10-11 13:07:11,715 | INFO     | pilot is running in a VM
[2025-10-11 15:08:07] 2025-10-11 13:07:11,715 | INFO     | architecture information:
[2025-10-11 15:08:07] 2025-10-11 13:07:11,716 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:08:07] 2025-10-11 13:07:11,748 | INFO     | cat /etc/os-release:
[2025-10-11 15:08:07] NAME="CentOS Linux"
[2025-10-11 15:08:07] VERSION="7 (Core)"
[2025-10-11 15:08:07] ID="centos"
[2025-10-11 15:08:07] ID_LIKE="rhel fedora"
[2025-10-11 15:08:07] VERSION_ID="7"
[2025-10-11 15:08:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:08:07] ANSI_COLOR="0;31"
[2025-10-11 15:08:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:08:07] HOME_URL="https://www.centos.org/"
[2025-10-11 15:08:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:08:07] 
[2025-10-11 15:08:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:08:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:08:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:08:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:08:07] 
[2025-10-11 15:08:07] 2025-10-11 13:07:11,748 | INFO     | ***************************************
[2025-10-11 15:08:07] 2025-10-11 13:07:12,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-11 15:08:07] 2025-10-11 13:07:12,284 | INFO     | sufficient remaining disk space (257469448192 B)
[2025-10-11 15:08:07] 2025-10-11 13:07:12,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:08:07] 2025-10-11 13:07:12,285 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:08:07] 2025-10-11 13:07:12,285 | INFO     | update_server=False
[2025-10-11 15:08:07] 2025-10-11 13:07:12,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:08:07] 2025-10-11 13:07:12,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:08:07] 2025-10-11 13:07:12,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:08:07] 2025-10-11 13:07:12,789 | INFO     | aborting loop
[2025-10-11 15:08:07] 2025-10-11 13:07:13,200 | INFO     | all data control threads have been joined
[2025-10-11 15:08:07] 2025-10-11 13:07:13,291 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,292 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,384 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,498 | INFO     | [job] validate thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,540 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:08:07] 2025-10-11 13:07:13,707 | INFO     | all payload control threads have been joined
[2025-10-11 15:08:07] 2025-10-11 13:07:13,793 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:13,926 | INFO     | all job control threads have been joined
[2025-10-11 15:08:07] 2025-10-11 13:07:14,022 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:08:07] 2025-10-11 13:07:14,205 | INFO     | [data] control thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,591 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,592 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,712 | INFO     | [payload] control thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,736 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,820 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:14,931 | INFO     | [job] control thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:15,589 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:18,114 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:08:07] 2025-10-11 13:07:18,376 [wrapper] supervise_pilot (15 min periods counter: 31)
[2025-10-11 15:08:07] 2025-10-11 13:07:42,808 | INFO     | PID=3301528 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:08:07] 2025-10-11 13:07:42,808 | INFO     | .. there are 7 such processes running
[2025-10-11 15:08:07] 2025-10-11 13:07:42,809 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:08:07] 2025-10-11 13:07:42,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:08:07] 2025-10-11 13:07:42,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:08:07] 2025-10-11 13:08:00,210 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:08:07] 2025-10-11 13:08:02,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134291736979264)>', '<ExcThread(monitor, started 134290742441728)>']
[2025-10-11 15:08:07] 2025-10-11 13:08:02,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:08:07] 2025-10-11 13:08:02,907 | INFO     | [monitor] control thread has ended
[2025-10-11 15:08:07] 2025-10-11 13:08:07,144 | INFO     | all workflow threads have been joined
[2025-10-11 15:08:07] 2025-10-11 13:08:07,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:08:07] 2025-10-11 13:08:07,145 | INFO     | traces error code: 0
[2025-10-11 15:08:07] 2025-10-11 13:08:07,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:08:07] 2025-10-11 13:08:07,230 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:08:07] 2025-10-11 13:08:07,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:08:07] 2025-10-11 13:08:07,236 [wrapper] pilotpid: 3301528
[2025-10-11 15:08:07] 2025-10-11 13:08:07,239 [wrapper] Pilot exit status: 0
[2025-10-11 15:08:07] 2025-10-11 13:08:07,249 [wrapper] pandaids: 6837875560
[2025-10-11 15:08:07] 2025-10-11 13:08:07,274 [wrapper] cleanup supervisor_pilot 3742507 3301529
[2025-10-11 15:08:07] ./runpilot2-wrapper.sh: line 615: 3742507 Terminated              sleep 900
[2025-10-11 15:08:07] 2025-10-11 13:08:07,278 [wrapper] Test setup, not cleaning
[2025-10-11 15:08:07] 2025-10-11 13:08:07,280 [wrapper] apfmon messages muted
[2025-10-11 15:08:07] 2025-10-11 13:08:07,282 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:08:07] 2025-10-11 13:08:07,284 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:08:07]  *** Error codes and diagnostics ***
[2025-10-11 15:08:07]     "exeErrorCode": 0,
[2025-10-11 15:08:07]     "exeErrorDiag": "",
[2025-10-11 15:08:07]     "pilotErrorCode": 0,
[2025-10-11 15:08:07]     "pilotErrorDiag": "",
[2025-10-11 15:08:07]  *** Listing of results directory ***
[2025-10-11 15:08:07] total 420336
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:00 pilot3.tar.gz
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 02:13 queuedata.json
[2025-10-11 15:08:07] -rwx------ 1 boinc boinc     36292 Oct 11 02:14 runpilot2-wrapper.sh
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:08:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:36 run_atlas
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:36 job.xml
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc 220723472 Oct 11 07:36 EVNT.46676267._001919.pool.root.1
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:36 start_atlas.sh
[2025-10-11 15:08:07] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:36 shared
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc    569683 Oct 11 07:36 input.tar.gz
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc      6401 Oct 11 07:36 init_data.xml
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:36 boinc_setup_complete
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:36 boinc_lockfile
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc      2549 Oct 11 07:37 pandaJob.out
[2025-10-11 15:08:07] -rw------- 1 boinc boinc    975533 Oct 11 07:37 agis_schedconf.cvmfs.json
[2025-10-11 15:08:07] drwx------ 5 boinc boinc      4096 Oct 11 07:37 pilot3
[2025-10-11 15:08:07] -rw------- 1 boinc boinc 197336750 Oct 11 15:06 HITS.46676269._047514.pool.root.1
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc       531 Oct 11 15:06 boinc_task_state.xml
[2025-10-11 15:08:07] -rw------- 1 boinc boinc      1024 Oct 11 15:06 memory_monitor_summary.json
[2025-10-11 15:08:07] -rw------- 1 boinc boinc   1560580 Oct 11 15:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:08:07] -rw------- 1 boinc boinc    668800 Oct 11 15:06 log.46676269._047514.job.log.tgz.1
[2025-10-11 15:08:07] -rw------- 1 boinc boinc      7708 Oct 11 15:07 heartbeat.json
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc        28 Oct 11 15:07 wrapper_checkpoint.txt
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:07 boinc_mmap_file
[2025-10-11 15:08:07] -rw------- 1 boinc boinc        95 Oct 11 15:07 pilot_heartbeat.json
[2025-10-11 15:08:07] -rw------- 1 boinc boinc      4886 Oct 11 15:08 pilotlog.txt
[2025-10-11 15:08:07] -rw------- 1 boinc boinc   3558215 Oct 11 15:08 log.46676269._047514.job.log.1
[2025-10-11 15:08:07] -rw------- 1 boinc boinc       357 Oct 11 15:08 output.list
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:08 runtime_log
[2025-10-11 15:08:07] -rw------- 1 boinc boinc   4249600 Oct 11 15:08 result.tar.gz
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc      8639 Oct 11 15:08 runtime_log.err
[2025-10-11 15:08:07] -rw------- 1 boinc boinc       642 Oct 11 15:08 kmzLDmwQcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmypeNDmCuHzgn.diag
[2025-10-11 15:08:07] -rw-r--r-- 1 boinc boinc     21142 Oct 11 15:08 stderr.txt
[2025-10-11 15:08:07] HITS file was successfully produced:
[2025-10-11 15:08:07] -rw------- 1 boinc boinc 197336750 Oct 11 15:06 shared/HITS.pool.root.1
[2025-10-11 15:08:07]  *** Contents of shared directory: ***
[2025-10-11 15:08:07] total 413000
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc 220723472 Oct 11 07:36 ATLAS.root_0
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:36 start_atlas.sh
[2025-10-11 15:08:07] -rw-r--r-- 2 boinc boinc    569683 Oct 11 07:36 input.tar.gz
[2025-10-11 15:08:07] -rw------- 1 boinc boinc 197336750 Oct 11 15:06 HITS.pool.root.1
[2025-10-11 15:08:07] -rw------- 1 boinc boinc   4249600 Oct 11 15:08 result.tar.gz
15:08:08 (3295445): run_atlas exited; CPU time 26635.785418
15:08:08 (3295445): called boinc_finish(0)

</stderr_txt>
]]>

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