Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:37:09 (3298098): wrapper (7.7.26015): starting
07:37:09 (3298098): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:37:09] Arguments: --nthreads 12
[2025-10-11 07:37:09] Threads: 12
[2025-10-11 07:37:09] Checking for CVMFS
[2025-10-11 07:37:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:37:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:37:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:37:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:37:09] 2.13.2.0 3295657 0 28712 151573 3 12 1797194 4096000 37 130560 0 6745 99.854 2693 2457 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:37:09] CVMFS is ok
[2025-10-11 07:37:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:37:09] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:37:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:37:09] Further information can be found at the LHC@home message board.
[2025-10-11 07:37:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:37:09] Checking for apptainer binary...
[2025-10-11 07:37:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:37:09] Running /usr/bin/apptainer --version
[2025-10-11 07:37:09] apptainer version 1.4.3
[2025-10-11 07:37:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:37:10] 9628
[2025-10-11 07:37:10] apptainer works
[2025-10-11 07:37:10] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:37:10] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:37:10] Starting ATLAS job with PandaID=6837876163
[2025-10-11 07:37:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:09:10]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:09:10] 2025-10-11 13:08:23,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:09:10] 2025-10-11 13:08:23,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:09:10] 2025-10-11 13:08:23,286 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:09:10] 2025-10-11 13:08:23,286 | INFO     | sum of square deviations: 27140905688.342464
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | sum of deviations: 67258001669.747665
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | mean x: 1760174572.3063064
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | mean y: 2638354.59009009
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | -- intersect: -4359258248.369401
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | intersect: -4359258248.369401
[2025-10-11 15:09:10] 2025-10-11 13:08:23,290 | INFO     | chi2: 2.200588479140187
[2025-10-11 15:09:10] 2025-10-11 13:08:23,291 | INFO     | sum of square deviations: 26234374620.05471
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | sum of deviations: 98407137275.42368
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | mean x: 1760174419.8154898
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | mean y: 2643544.8200455583
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | -- intersect: -6599904763.194887
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | intersect: -6599904763.194887
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | chi2: 1.3764102243376766
[2025-10-11 15:09:10] 2025-10-11 13:08:23,294 | INFO     | current chi2=1.3764102243376766 (change=37.452629722233794 %)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,295 | INFO     | sum of square deviations: 25348236004.83863
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | sum of deviations: 96940172875.06459
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | mean x: 1760174267.3225806
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | mean y: 2643292.370967742
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | -- intersect: -6728854620.61674
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | intersect: -6728854620.61674
[2025-10-11 15:09:10] 2025-10-11 13:08:23,298 | INFO     | chi2: 1.3764808348123299
[2025-10-11 15:09:10] 2025-10-11 13:08:23,299 | INFO     | current chi2=1.3764808348123299 (change=-0.00513004578175559 %)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,299 | INFO     | right removable region: 433
[2025-10-11 15:09:10] 2025-10-11 13:08:23,299 | INFO     | sum of square deviations: 26234156240.054695
[2025-10-11 15:09:10] 2025-10-11 13:08:23,302 | INFO     | sum of deviations: -7240036913.876984
[2025-10-11 15:09:10] 2025-10-11 13:08:23,302 | INFO     | mean x: 1760174724.8154898
[2025-10-11 15:09:10] 2025-10-11 13:08:23,302 | INFO     | mean y: 2650832.3348519364
[2025-10-11 15:09:10] 2025-10-11 13:08:23,302 | INFO     | -- intersect: 488419456.4875164
[2025-10-11 15:09:10] 2025-10-11 13:08:23,302 | INFO     | intersect: 488419456.4875164
[2025-10-11 15:09:10] 2025-10-11 13:08:23,303 | INFO     | chi2: 0.837500072084279
[2025-10-11 15:09:10] 2025-10-11 13:08:23,303 | INFO     | current chi2=0.837500072084279 (change=61.94199506072545 %)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,303 | INFO     | sum of square deviations: 25347852314.838627
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | sum of deviations: -10386192076.32259
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | mean x: 1760174877.3225806
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | mean y: 2651372.430875576
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | -- intersect: 723876750.2940675
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | intersect: 723876750.2940675
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | chi2: 0.8361217007864633
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | current chi2=0.8361217007864633 (change=0.1645816333347131 %)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,306 | INFO     | left removable region: 20
[2025-10-11 15:09:10] 2025-10-11 13:08:23,307 | INFO     | sum of square deviations: 21843651704.770138
[2025-10-11 15:09:10] 2025-10-11 13:08:23,309 | INFO     | sum of deviations: 19543747723.198547
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | mean x: 1760174846.8426151
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | mean y: 2656842.556900726
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | -- intersect: -1572190331.3659225
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | intersect: -1572190331.3659225
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | chi2: 0.0023908523084685447
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | -- intersect: -1572190331.3659225
[2025-10-11 15:09:10] 2025-10-11 13:08:23,310 | INFO     | current memory leak: 0.89 B/s (using 413 data points, chi2=0.00)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | could have reported an average CPU frequency of 2396 MHz (18 samples)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | ..............................
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . Timing measurements:
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . get job = 0 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . initial setup = 1 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . payload setup = 4 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . stage-in = 0 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . payload execution = 27038 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . stage-out = 0 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | . log creation = 0 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,311 | INFO     | ..............................
[2025-10-11 15:09:10] 2025-10-11 13:08:23,377 | INFO     | 
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | job summary report
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | --------------------------------------------------
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | PanDA job id: 6837876163
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | task id: 46676269
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | errors: (none)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | pilot state: finished 
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | transexitcode: 0
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | exeerrorcode: 0
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | exeerrordiag: 
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | exitcode: 0
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | exitmsg: OK
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | cpuconsumptiontime: 26350 s
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | nevents: 400
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | neventsw: 0
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | pid: 3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | pgrp: 3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | corecount: 12
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | event service: False
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 27046: 2386322, 27048: 2395376, 27051: 2395514}
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | --------------------------------------------------
[2025-10-11 15:09:10] 2025-10-11 13:08:23,378 | INFO     | 
[2025-10-11 15:09:10] 2025-10-11 13:08:23,379 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 15:09:10] 2025-10-11 13:08:23,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | job 6837876163 has completed (purged errors)
[2025-10-11 15:09:10] 2025-10-11 13:08:23,400 | INFO     | overall cleanup function is called
[2025-10-11 15:09:10] 2025-10-11 13:08:24,408 | INFO     | --- collectZombieJob: --- 10, [3330870]
[2025-10-11 15:09:10] 2025-10-11 13:08:24,408 | INFO     | zombie collector waiting for pid 3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:24,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:09:10] 2025-10-11 13:08:24,409 | INFO     | collected zombie processes
[2025-10-11 15:09:10] 2025-10-11 13:08:24,409 | INFO     | will attempt to kill all subprocesses of pid=3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:24,471 | INFO     | process IDs to be killed: [3330870] (in reverse order)
[2025-10-11 15:09:10] 2025-10-11 13:08:24,518 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:09:10] 2025-10-11 13:08:24,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:09:10] 2025-10-11 13:08:24,521 | INFO     | did not find any defunct processes belonging to 3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:24,524 | INFO     | did not find any defunct processes belonging to 3330870
[2025-10-11 15:09:10] 2025-10-11 13:08:24,524 | INFO     | ready for new job
[2025-10-11 15:09:10] 2025-10-11 13:08:24,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:09:10] 2025-10-11 13:08:24,527 | INFO     | ***************************************
[2025-10-11 15:09:10] 2025-10-11 13:08:24,527 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:09:10] 2025-10-11 13:08:24,527 | INFO     | ***************************************
[2025-10-11 15:09:10] 2025-10-11 13:08:24,527 | INFO     | 
[2025-10-11 15:09:10] 2025-10-11 13:08:24,528 | INFO     | pilot is running in a VM
[2025-10-11 15:09:10] 2025-10-11 13:08:24,528 | INFO     | architecture information:
[2025-10-11 15:09:10] 2025-10-11 13:08:24,528 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:09:10] 2025-10-11 13:08:24,546 | INFO     | cat /etc/os-release:
[2025-10-11 15:09:10] NAME="CentOS Linux"
[2025-10-11 15:09:10] VERSION="7 (Core)"
[2025-10-11 15:09:10] ID="centos"
[2025-10-11 15:09:10] ID_LIKE="rhel fedora"
[2025-10-11 15:09:10] VERSION_ID="7"
[2025-10-11 15:09:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:09:10] ANSI_COLOR="0;31"
[2025-10-11 15:09:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:09:10] HOME_URL="https://www.centos.org/"
[2025-10-11 15:09:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:09:10] 
[2025-10-11 15:09:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:09:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:09:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:09:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:09:10] 
[2025-10-11 15:09:10] 2025-10-11 13:08:24,547 | INFO     | ***************************************
[2025-10-11 15:09:10] 2025-10-11 13:08:25,051 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 15:09:10] 2025-10-11 13:08:25,075 | INFO     | sufficient remaining disk space (258339766272 B)
[2025-10-11 15:09:10] 2025-10-11 13:08:25,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:09:10] 2025-10-11 13:08:25,076 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:09:10] 2025-10-11 13:08:25,076 | INFO     | update_server=False
[2025-10-11 15:09:10] 2025-10-11 13:08:25,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:09:10] 2025-10-11 13:08:25,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:09:10] 2025-10-11 13:08:25,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:09:10] 2025-10-11 13:08:25,332 | INFO     | all job control threads have been joined
[2025-10-11 15:09:10] 2025-10-11 13:08:25,403 | INFO     | all data control threads have been joined
[2025-10-11 15:09:10] 2025-10-11 13:08:25,411 | INFO     | all payload control threads have been joined
[2025-10-11 15:09:10] 2025-10-11 13:08:25,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:09:10] 2025-10-11 13:08:25,585 | INFO     | aborting loop
[2025-10-11 15:09:10] 2025-10-11 13:08:25,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:09:10] 2025-10-11 13:08:26,086 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,087 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,087 | INFO     | [job] validate thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,338 | INFO     | [job] control thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,409 | INFO     | [data] control thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,415 | INFO     | [payload] control thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,425 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,427 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,590 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,666 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:26,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:27,071 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:27,279 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:27,547 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:27,551 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:29,833 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:09:10] 2025-10-11 13:08:56,124 | INFO     | PID=3304184 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:09:10] 2025-10-11 13:08:56,124 | INFO     | .. there are 4 such processes running
[2025-10-11 15:09:10] 2025-10-11 13:08:56,125 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:09:10] 2025-10-11 13:08:56,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:09:10] 2025-10-11 13:08:56,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:09:10] 2025-10-11 13:09:03,500 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:09:10] 2025-10-11 13:09:03,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130569052522304)>', '<ExcThread(monitor, started 130568163399424)>']
[2025-10-11 15:09:10] 2025-10-11 13:09:04,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:09:10] 2025-10-11 13:09:04,193 | INFO     | [monitor] control thread has ended
[2025-10-11 15:09:10] 2025-10-11 13:09:08,910 | INFO     | all workflow threads have been joined
[2025-10-11 15:09:10] 2025-10-11 13:09:08,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:09:10] 2025-10-11 13:09:08,911 | INFO     | traces error code: 0
[2025-10-11 15:09:10] 2025-10-11 13:09:08,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:09:10] 2025-10-11 13:09:10,050 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:09:10] 2025-10-11 13:09:10,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:09:10] 2025-10-11 13:09:10,098 [wrapper] pilotpid: 3304184
[2025-10-11 15:09:10] 2025-10-11 13:09:10,123 [wrapper] Pilot exit status: 0
[2025-10-11 15:09:10] 2025-10-11 13:09:10,193 [wrapper] pandaids: 6837876163
[2025-10-11 15:09:10] 2025-10-11 13:09:10,368 [wrapper] cleanup supervisor_pilot 3743036 3304186
[2025-10-11 15:09:10] 2025-10-11 13:09:10,397 [wrapper] Test setup, not cleaning
[2025-10-11 15:09:10] 2025-10-11 13:09:10,419 [wrapper] apfmon messages muted
[2025-10-11 15:09:10] 2025-10-11 13:09:10,447 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:09:10] 2025-10-11 13:09:10,470 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:09:10]  *** Error codes and diagnostics ***
[2025-10-11 15:09:10]     "exeErrorCode": 0,
[2025-10-11 15:09:10]     "exeErrorDiag": "",
[2025-10-11 15:09:10]     "pilotErrorCode": 0,
[2025-10-11 15:09:10]     "pilotErrorDiag": "",
[2025-10-11 15:09:10]  *** Listing of results directory ***
[2025-10-11 15:09:10] total 415932
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:33 pilot3.tar.gz
[2025-10-11 15:09:10] -rwx------ 1 boinc boinc     36292 Oct 11 02:46 runpilot2-wrapper.sh
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc      5112 Oct 11 02:46 queuedata.json
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:09:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:37 run_atlas
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:37 job.xml
[2025-10-11 15:09:10] -rw-r--r-- 2 boinc boinc 220182639 Oct 11 07:37 EVNT.46676267._001940.pool.root.1
[2025-10-11 15:09:10] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:37 start_atlas.sh
[2025-10-11 15:09:10] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:37 shared
[2025-10-11 15:09:10] -rw-r--r-- 2 boinc boinc    569678 Oct 11 07:37 input.tar.gz
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc      6401 Oct 11 07:37 init_data.xml
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:37 boinc_setup_complete
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:37 boinc_lockfile
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc      2550 Oct 11 07:37 pandaJob.out
[2025-10-11 15:09:10] -rw------- 1 boinc boinc    975533 Oct 11 07:37 agis_schedconf.cvmfs.json
[2025-10-11 15:09:10] drwx------ 5 boinc boinc      4096 Oct 11 07:37 pilot3
[2025-10-11 15:09:10] -rw------- 1 boinc boinc 193304772 Oct 11 15:07 HITS.46676269._048052.pool.root.1
[2025-10-11 15:09:10] -rw------- 1 boinc boinc        95 Oct 11 15:07 pilot_heartbeat.json
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc       531 Oct 11 15:08 boinc_task_state.xml
[2025-10-11 15:09:10] -rw------- 1 boinc boinc      1014 Oct 11 15:08 memory_monitor_summary.json
[2025-10-11 15:09:10] -rw------- 1 boinc boinc   1560580 Oct 11 15:08 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:09:10] -rw------- 1 boinc boinc    687796 Oct 11 15:08 log.46676269._048052.job.log.tgz.1
[2025-10-11 15:09:10] -rw------- 1 boinc boinc      7709 Oct 11 15:08 heartbeat.json
[2025-10-11 15:09:10] -rw------- 1 boinc boinc      4886 Oct 11 15:09 pilotlog.txt
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc        28 Oct 11 15:09 wrapper_checkpoint.txt
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:09 boinc_mmap_file
[2025-10-11 15:09:10] -rw------- 1 boinc boinc   3571846 Oct 11 15:09 log.46676269._048052.job.log.1
[2025-10-11 15:09:10] -rw------- 1 boinc boinc       357 Oct 11 15:09 output.list
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:09 runtime_log
[2025-10-11 15:09:10] -rw------- 1 boinc boinc   4280320 Oct 11 15:09 result.tar.gz
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc      8639 Oct 11 15:09 runtime_log.err
[2025-10-11 15:09:10] -rw------- 1 boinc boinc       641 Oct 11 15:09 rlFMDmyvcR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8rQMDmVE1ohn.diag
[2025-10-11 15:09:10] -rw-r--r-- 1 boinc boinc     20731 Oct 11 15:09 stderr.txt
[2025-10-11 15:09:11] HITS file was successfully produced:
[2025-10-11 15:09:11] -rw------- 1 boinc boinc 193304772 Oct 11 15:07 shared/HITS.pool.root.1
[2025-10-11 15:09:11]  *** Contents of shared directory: ***
[2025-10-11 15:09:11] total 408564
[2025-10-11 15:09:11] -rw-r--r-- 2 boinc boinc 220182639 Oct 11 07:37 ATLAS.root_0
[2025-10-11 15:09:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:37 start_atlas.sh
[2025-10-11 15:09:11] -rw-r--r-- 2 boinc boinc    569678 Oct 11 07:37 input.tar.gz
[2025-10-11 15:09:11] -rw------- 1 boinc boinc 193304772 Oct 11 15:07 HITS.pool.root.1
[2025-10-11 15:09:11] -rw------- 1 boinc boinc   4280320 Oct 11 15:09 result.tar.gz
15:09:12 (3298098): run_atlas exited; CPU time 26496.545683
15:09:12 (3298098): called boinc_finish(0)

</stderr_txt>
]]>

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