Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:38:27 (3404129): wrapper (7.7.26015): starting
07:38:27 (3404129): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:38:27] Arguments: --nthreads 12
[2025-10-11 07:38:27] Threads: 12
[2025-10-11 07:38:27] Checking for CVMFS
[2025-10-11 07:38:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:38:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:38:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:38:27] 2.13.2.0 3295657 1 45472 151573 2 186 1798243 4096000 4334 130560 0 300775 99.994 2772 2039 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:38:27] CVMFS is ok
[2025-10-11 07:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:38:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:38:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:38:27] Further information can be found at the LHC@home message board.
[2025-10-11 07:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:38:27] Checking for apptainer binary...
[2025-10-11 07:38:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:38:27] Running /usr/bin/apptainer --version
[2025-10-11 07:38:27] apptainer version 1.4.3
[2025-10-11 07:38:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:38:27] 9628
[2025-10-11 07:38:27] apptainer works
[2025-10-11 07:38:27] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:38:27] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:38:27] Starting ATLAS job with PandaID=6837785196
[2025-10-11 07:38:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:06:28 (3731050): wrapper (7.7.26015): starting
15:06:28 (3731050): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 15:06:28] Arguments: --nthreads 12
[2025-10-11 15:06:28] Threads: 12
[2025-10-11 15:06:28] This job has been restarted, cleaning up previous attempt
[2025-10-11 15:06:28] Checking for CVMFS
[2025-10-11 15:06:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:06:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:06:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:06:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:06:29] 2.13.2.0 3295657 449 47436 151584 3 57 1868258 4096000 5122 130560 0 1200813 99.997 17191 1007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 15:06:29] CVMFS is ok
[2025-10-11 15:06:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:06:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 15:06:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 15:06:29] Further information can be found at the LHC@home message board.
[2025-10-11 15:06:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:06:29] Checking for apptainer binary...
[2025-10-11 15:06:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:06:29] Running /usr/bin/apptainer --version
[2025-10-11 15:06:29] apptainer version 1.4.3
[2025-10-11 15:06:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:06:30] 9628
[2025-10-11 15:06:30] apptainer works
[2025-10-11 15:06:30] Set ATHENA_PROC_NUMBER=12
[2025-10-11 15:06:30] Set ATHENA_CORE_NUMBER=12
[2025-10-11 15:06:30] Starting ATLAS job with PandaID=6837785196
[2025-10-11 15:06:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:14:28 (3992621): wrapper (7.7.26015): starting
17:14:28 (3992621): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:14:28] Arguments: --nthreads 12
[2025-10-11 17:14:28] Threads: 12
[2025-10-11 17:14:28] This job has been restarted, cleaning up previous attempt
[2025-10-11 17:14:29] Checking for CVMFS
[2025-10-11 17:14:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:14:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:14:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:14:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:14:32] 2.13.2.0 3295657 577 47708 151589 3 1 1885719 4096000 0 130560 0 1310844 99.996 22459 821 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 17:14:32] CVMFS is ok
[2025-10-11 17:14:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:14:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 17:14:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 17:14:32] Further information can be found at the LHC@home message board.
[2025-10-11 17:14:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:14:32] Checking for apptainer binary...
[2025-10-11 17:14:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:14:32] Running /usr/bin/apptainer --version
[2025-10-11 17:14:32] apptainer version 1.4.3
[2025-10-11 17:14:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:14:33] 9628
[2025-10-11 17:14:33] apptainer works
[2025-10-11 17:14:33] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:14:33] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:14:33] Starting ATLAS job with PandaID=6837785196
[2025-10-11 17:14:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:44:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:44:11] 2025-10-11 18:43:23,710 | INFO     | sum of square deviations: 2370001608.730975
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | sum of deviations: 39493860104.98473
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | mean x: 1760201861.8527918
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | mean y: 2694811.4822335024
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | -- intersect: -29329422868.29057
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | intersect: -29329422868.29057
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | chi2: 4.065024462538076
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | current chi2=4.065024462538076 (change=-0.11738234491127858 %)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | right removable region: 196
[2025-10-11 20:44:11] 2025-10-11 18:43:23,711 | INFO     | sum of square deviations: 2369923408.121811
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | sum of deviations: -20169711501.690342
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | mean x: 1760202166.8426397
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | mean y: 2745723.5583756347
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | -- intersect: 14983301537.386372
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | intersect: 14983301537.386372
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | chi2: 0.9414021531906027
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | current chi2=0.9414021531906027 (change=76.81423071868575 %)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,712 | INFO     | sum of square deviations: 2193966772.994784
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | sum of deviations: -41231491883.911476
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | mean x: 1760202319.3385417
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | mean y: 2763892.2447916665
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | -- intersect: 33082466163.57075
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | intersect: 33082466163.57075
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | chi2: 0.4717568684774142
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | current chi2=0.4717568684774142 (change=49.88784900496196 %)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | sum of square deviations: 2026940537.8609672
[2025-10-11 20:44:11] 2025-10-11 18:43:23,713 | INFO     | sum of deviations: -49944255999.2032
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | mean x: 1760202471.8342247
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | mean y: 2771810.219251337
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | -- intersect: 43374543809.25995
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | intersect: 43374543809.25995
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | chi2: 0.35102919296625484
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | current chi2=0.35102919296625484 (change=25.591079553500833 %)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | sum of square deviations: 1868612140.2197864
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | sum of deviations: -51123294238.142845
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | mean x: 1760202624.3296704
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | mean y: 2772877.285714286
[2025-10-11 20:44:11] 2025-10-11 18:43:23,714 | INFO     | -- intersect: 48160094958.995316
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | intersect: 48160094958.995316
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | chi2: 0.3089377991853576
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | current chi2=0.3089377991853576 (change=11.99085279068046 %)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | left removable region: 40
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | sum of square deviations: 1176692197.743593
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | sum of deviations: -20709235778.20514
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | mean x: 1760203051.2564104
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | mean y: 2739283.205128205
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | -- intersect: 30981494879.516373
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | intersect: 30981494879.516373
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | chi2: 0.23283358054233258
[2025-10-11 20:44:11] 2025-10-11 18:43:23,715 | INFO     | -- intersect: 30981494879.516373
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | current memory leak: -17.60 B/s (using 156 data points, chi2=0.23)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | could have reported an average CPU frequency of 2396 MHz (10 samples)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | ..............................
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . Timing measurements:
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . get job = 0 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . initial setup = 5 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . payload setup = 40 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . stage-in = 0 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . payload execution = 12338 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . stage-out = 1 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | . log creation = 0 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,716 | INFO     | ..............................
[2025-10-11 20:44:11] 2025-10-11 18:43:23,765 | INFO     | 
[2025-10-11 20:44:11] 2025-10-11 18:43:23,765 | INFO     | job summary report
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | --------------------------------------------------
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | PanDA job id: 6837785196
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | task id: 46676269
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | errors: (none)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | pilot state: finished 
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | transexitcode: 0
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | exeerrorcode: 0
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | exeerrordiag: 
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | exitcode: 0
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | exitmsg: OK
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | cpuconsumptiontime: 25075 s
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | nevents: 400
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | neventsw: 0
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | pid: 4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | pgrp: 4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | corecount: 12
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | event service: False
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 3: 2348862, 4: 2348890, 15: 2348918, 26: 2349074, 32: 2349364, 37: 2349392, 12382: 2379459, 12384: 2388457, 12385: 2388
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | --------------------------------------------------
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | 
[2025-10-11 20:44:11] 2025-10-11 18:43:23,766 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-11 20:44:11] 2025-10-11 18:43:23,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | job 6837785196 has completed (purged errors)
[2025-10-11 20:44:11] 2025-10-11 18:43:23,787 | INFO     | overall cleanup function is called
[2025-10-11 20:44:11] 2025-10-11 18:43:24,795 | INFO     | --- collectZombieJob: --- 10, [4013818]
[2025-10-11 20:44:11] 2025-10-11 18:43:24,796 | INFO     | zombie collector waiting for pid 4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:24,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:44:11] 2025-10-11 18:43:24,796 | INFO     | collected zombie processes
[2025-10-11 20:44:11] 2025-10-11 18:43:24,796 | INFO     | will attempt to kill all subprocesses of pid=4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:24,830 | INFO     | process IDs to be killed: [4013818] (in reverse order)
[2025-10-11 20:44:11] 2025-10-11 18:43:24,860 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:44:11] 2025-10-11 18:43:24,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:44:11] 2025-10-11 18:43:24,862 | INFO     | did not find any defunct processes belonging to 4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:24,863 | INFO     | did not find any defunct processes belonging to 4013818
[2025-10-11 20:44:11] 2025-10-11 18:43:24,863 | INFO     | ready for new job
[2025-10-11 20:44:11] 2025-10-11 18:43:24,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:44:11] 2025-10-11 18:43:24,864 | INFO     | ***************************************
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | ***************************************
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | 
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | pilot is running in a VM
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | architecture information:
[2025-10-11 20:44:11] 2025-10-11 18:43:24,865 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:44:11] 2025-10-11 18:43:24,878 | INFO     | cat /etc/os-release:
[2025-10-11 20:44:11] NAME="CentOS Linux"
[2025-10-11 20:44:11] VERSION="7 (Core)"
[2025-10-11 20:44:11] ID="centos"
[2025-10-11 20:44:11] ID_LIKE="rhel fedora"
[2025-10-11 20:44:11] VERSION_ID="7"
[2025-10-11 20:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:44:11] ANSI_COLOR="0;31"
[2025-10-11 20:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:44:11] HOME_URL="https://www.centos.org/"
[2025-10-11 20:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:44:11] 
[2025-10-11 20:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:44:11] 
[2025-10-11 20:44:11] 2025-10-11 18:43:24,879 | INFO     | ***************************************
[2025-10-11 20:44:11] 2025-10-11 18:43:25,382 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-11 20:44:11] 2025-10-11 18:43:25,397 | INFO     | sufficient remaining disk space (261978324992 B)
[2025-10-11 20:44:11] 2025-10-11 18:43:25,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:44:11] 2025-10-11 18:43:25,398 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:44:11] 2025-10-11 18:43:25,398 | INFO     | update_server=False
[2025-10-11 20:44:11] 2025-10-11 18:43:25,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:44:11] 2025-10-11 18:43:25,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:44:11] 2025-10-11 18:43:25,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:44:11] 2025-10-11 18:43:25,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 20:44:11] 2025-10-11 18:43:25,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 20:44:11] 2025-10-11 18:43:25,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:44:11] 2025-10-11 18:43:25,475 | INFO     | will abort loop
[2025-10-11 20:44:11] 2025-10-11 18:43:25,891 | INFO     | all data control threads have been joined
[2025-10-11 20:44:11] 2025-10-11 18:43:26,304 | INFO     | all payload control threads have been joined
[2025-10-11 20:44:11] 2025-10-11 18:43:26,401 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,404 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,481 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,556 | INFO     | all job control threads have been joined
[2025-10-11 20:44:11] 2025-10-11 18:43:26,597 | INFO     | [job] validate thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,745 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,896 | INFO     | [data] control thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:26,955 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,310 | INFO     | [payload] control thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,384 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,404 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,561 | INFO     | [job] control thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,792 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,800 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:27,977 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:28,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:44:11] 2025-10-11 18:43:32,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:35,991 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:44:11] 2025-10-11 18:43:36,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:44:11] 2025-10-11 18:43:55,127 | INFO     | PID=4000385 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:44:11] 2025-10-11 18:43:55,128 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:44:11] 2025-10-11 18:43:55,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:44:11] 2025-10-11 18:43:55,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:44:11] 2025-10-11 18:44:06,224 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:44:11] 2025-10-11 18:44:06,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133879921612608)>', '<ExcThread(monitor, started 133879130208000)>']
[2025-10-11 20:44:11] 2025-10-11 18:44:07,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:44:11] 2025-10-11 18:44:07,186 | INFO     | [monitor] control thread has ended
[2025-10-11 20:44:11] 2025-10-11 18:44:11,734 | INFO     | all workflow threads have been joined
[2025-10-11 20:44:11] 2025-10-11 18:44:11,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:44:11] 2025-10-11 18:44:11,735 | INFO     | traces error code: 0
[2025-10-11 20:44:11] 2025-10-11 18:44:11,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:44:11] 2025-10-11 18:44:11,849 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:44:11] 2025-10-11 18:44:11,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:44:11] 2025-10-11 18:44:11,856 [wrapper] pilotpid: 4000385
[2025-10-11 20:44:11] 2025-10-11 18:44:11,860 [wrapper] Pilot exit status: 0
[2025-10-11 20:44:11] 2025-10-11 18:44:11,871 [wrapper] pandaids: 6837785196 6837785196 6837785196
[2025-10-11 20:44:11] 2025-10-11 18:44:11,895 [wrapper] cleanup supervisor_pilot  353636 4000386
[2025-10-11 20:44:11] 2025-10-11 18:44:11,898 [wrapper] Test setup, not cleaning
[2025-10-11 20:44:11] 2025-10-11 18:44:11,901 [wrapper] apfmon messages muted
[2025-10-11 20:44:11] 2025-10-11 18:44:11,905 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:44:11] 2025-10-11 18:44:11,908 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:44:11]  *** Error codes and diagnostics ***
[2025-10-11 20:44:11]     "exeErrorCode": 0,
[2025-10-11 20:44:11]     "exeErrorDiag": "",
[2025-10-11 20:44:11]     "pilotErrorCode": 0,
[2025-10-11 20:44:11]     "pilotErrorDiag": "",
[2025-10-11 20:44:11]  *** Listing of results directory ***
[2025-10-11 20:44:11] total 634532
[2025-10-11 20:44:11] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc      5112 Oct 10 22:48 queuedata.json
[2025-10-11 20:44:11] -rwx------ 1 boinc boinc     36292 Oct 10 22:48 runpilot2-wrapper.sh
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc    557409 Oct 10 22:48 pilot3.tar.gz
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:44:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:38 run_atlas
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:38 job.xml
[2025-10-11 20:44:11] -rw-r--r-- 3 boinc boinc 223088507 Oct 11 07:38 EVNT.46676267._001821.pool.root.1
[2025-10-11 20:44:11] -rw-r--r-- 3 boinc boinc 223088507 Oct 11 07:38 ATLAS.root_0
[2025-10-11 20:44:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:38 start_atlas.sh
[2025-10-11 20:44:11] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:38 shared
[2025-10-11 20:44:11] -rw-r--r-- 2 boinc boinc    569679 Oct 11 07:38 input.tar.gz
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:38 boinc_setup_complete
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:38 boinc_lockfile
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc      6409 Oct 11 17:14 init_data.xml
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc      2549 Oct 11 17:14 pandaJob.out
[2025-10-11 20:44:11] -rw------- 1 boinc boinc    975512 Oct 11 17:15 agis_schedconf.cvmfs.json
[2025-10-11 20:44:11] -rw------- 1 boinc boinc 195298260 Oct 11 20:42 HITS.46676269._045027.pool.root.1
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc       531 Oct 11 20:43 boinc_task_state.xml
[2025-10-11 20:44:11] -rw------- 1 boinc boinc      1013 Oct 11 20:43 memory_monitor_summary.json
[2025-10-11 20:44:11] -rw------- 1 boinc boinc   1560580 Oct 11 20:43 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:44:11] -rw------- 1 boinc boinc    496519 Oct 11 20:43 log.46676269._045027.job.log.tgz.1
[2025-10-11 20:44:11] -rw------- 1 boinc boinc      7720 Oct 11 20:43 heartbeat.json
[2025-10-11 20:44:11] -rw------- 1 boinc boinc        96 Oct 11 20:43 pilot_heartbeat.json
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc      8192 Oct 11 20:44 boinc_mmap_file
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc        28 Oct 11 20:44 wrapper_checkpoint.txt
[2025-10-11 20:44:11] -rw------- 1 boinc boinc      5069 Oct 11 20:44 pilotlog.txt
[2025-10-11 20:44:11] -rw------- 1 boinc boinc   1691487 Oct 11 20:44 log.46676269._045027.job.log.1
[2025-10-11 20:44:11] -rw------- 1 boinc boinc       357 Oct 11 20:44 output.list
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc       620 Oct 11 20:44 runtime_log
[2025-10-11 20:44:11] -rw------- 1 boinc boinc   2211840 Oct 11 20:44 result.tar.gz
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc      8716 Oct 11 20:44 runtime_log.err
[2025-10-11 20:44:11] -rw------- 1 boinc boinc       891 Oct 11 20:44 dkxKDmrDZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhQeNDmk0yzEm.diag
[2025-10-11 20:44:11] -rw-r--r-- 1 boinc boinc     25528 Oct 11 20:44 stderr.txt
[2025-10-11 20:44:11] HITS file was successfully produced:
[2025-10-11 20:44:11] -rw------- 1 boinc boinc 195298260 Oct 11 20:42 shared/HITS.pool.root.1
[2025-10-11 20:44:11]  *** Contents of shared directory: ***
[2025-10-11 20:44:11] total 411324
[2025-10-11 20:44:11] -rw-r--r-- 3 boinc boinc 223088507 Oct 11 07:38 ATLAS.root_0
[2025-10-11 20:44:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:38 start_atlas.sh
[2025-10-11 20:44:11] -rw-r--r-- 2 boinc boinc    569679 Oct 11 07:38 input.tar.gz
[2025-10-11 20:44:11] -rw------- 1 boinc boinc 195298260 Oct 11 20:42 HITS.pool.root.1
[2025-10-11 20:44:11] -rw------- 1 boinc boinc   2211840 Oct 11 20:44 result.tar.gz
20:44:13 (3992621): run_atlas exited; CPU time 25085.596132
20:44:13 (3992621): called boinc_finish(0)

</stderr_txt>
]]>

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