Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:03 (3183878): wrapper (7.7.26015): starting
09:13:03 (3183878): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 09:13:03] Arguments: --nthreads 4
[2025-10-12 09:13:03] Threads: 4
[2025-10-12 09:13:03] Checking for CVMFS
[2025-10-12 09:13:03] No cvmfs_config command found, will try listing directly
[2025-10-12 09:13:03] CVMFS is ok
[2025-10-12 09:13:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:13:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:13:03] Further information can be found at the LHC@home message board.
[2025-10-12 09:13:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:13:03] Checking for apptainer binary...
[2025-10-12 09:13:03] which: no apptainer in ((null))
[2025-10-12 09:13:03] apptainer is not installed, using version from CVMFS
[2025-10-12 09:13:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:13:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-12 09:13:03] apptainer works
[2025-10-12 09:13:03] Set ATHENA_PROC_NUMBER=4
[2025-10-12 09:13:03] Set ATHENA_CORE_NUMBER=4
[2025-10-12 09:13:03] Starting ATLAS job with PandaID=6837875280
[2025-10-12 09:13:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:28:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:28:25] 2025-10-12 10:07:58,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:28:25] 2025-10-12 10:07:58,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:28:25] 2025-10-12 10:07:58,694 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:28:25] 2025-10-12 10:07:58,694 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,695 | INFO     | sum of deviations: 13497712170.000004
[2025-10-12 12:28:25] 2025-10-12 10:07:58,695 | INFO     | mean x: 1760258435.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,695 | INFO     | mean y: 2305819.1395348837
[2025-10-12 12:28:25] 2025-10-12 10:07:58,696 | INFO     | -- intersect: -15056395266.982111
[2025-10-12 12:28:25] 2025-10-12 10:07:58,696 | INFO     | intersect: -15056395266.982111
[2025-10-12 12:28:25] 2025-10-12 10:07:58,696 | INFO     | chi2: 1.9291784820415336
[2025-10-12 12:28:25] 2025-10-12 10:07:58,696 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,697 | INFO     | sum of deviations: 22560420803.999996
[2025-10-12 12:28:25] 2025-10-12 10:07:58,697 | INFO     | mean x: 1760258283.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | mean y: 2315894.760479042
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | -- intersect: -27496331211.16891
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | intersect: -27496331211.16891
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | chi2: 1.2648642516672157
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | current chi2=1.2648642516672157 (change=34.435083977886485 %)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,698 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,699 | INFO     | sum of deviations: 21549464784.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | mean x: 1760258130.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | mean y: 2314669.574074074
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | -- intersect: -28772062253.798965
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | intersect: -28772062253.798965
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | chi2: 1.265841218025356
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | current chi2=1.265841218025356 (change=-0.07723883071661843 %)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,700 | INFO     | right removable region: 161
[2025-10-12 12:28:25] 2025-10-12 10:07:58,701 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | sum of deviations: -6611167922.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | mean x: 1760258588.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | mean y: 2328384.6467065867
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | -- intersect: 8060609155.414062
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | intersect: 8060609155.414062
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | chi2: 0.6881431963329994
[2025-10-12 12:28:25] 2025-10-12 10:07:58,702 | INFO     | current chi2=0.6881431963329994 (change=64.3297288074259 %)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,703 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | sum of deviations: -6195351082.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | mean x: 1760258740.5
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | mean y: 2327900.1049382715
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | -- intersect: 8274803842.3146
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | intersect: 8274803842.3146
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | chi2: 0.6842285842583059
[2025-10-12 12:28:25] 2025-10-12 10:07:58,704 | INFO     | current chi2=0.6842285842583059 (change=0.568865912727725 %)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,705 | INFO     | left removable region: 20
[2025-10-12 12:28:25] 2025-10-12 10:07:58,705 | INFO     | sum of square deviations: 869188390.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | sum of deviations: 1214286251.9999998
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | mean x: 1760258710.0
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | mean y: 2340552.0212765955
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | -- intersect: -2456801765.2343125
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | intersect: -2456801765.2343125
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | chi2: 0.0011456175024977821
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | -- intersect: -2456801765.2343125
[2025-10-12 12:28:25] 2025-10-12 10:07:58,706 | INFO     | current memory leak: 1.40 B/s (using 141 data points, chi2=0.00)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | could have reported an average CPU frequency of 2681 MHz (9 samples)
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | ..............................
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | . Timing measurements:
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | . get job = 0 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | . initial setup = 1 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,707 | INFO     | . payload setup = 5 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,708 | INFO     | . stage-in = 0 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,708 | INFO     | . payload execution = 10451 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,708 | INFO     | . stage-out = 0 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,708 | INFO     | . log creation = 0 s
[2025-10-12 12:28:25] 2025-10-12 10:07:58,708 | INFO     | ..............................
[2025-10-12 12:28:25] 2025-10-12 10:07:59,116 | INFO     | 
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | job summary report
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | --------------------------------------------------
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | PanDA job id: 6837875280
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | task id: 46676269
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | errors: (none)
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | pilot state: finished 
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | transexitcode: 0
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | exeerrorcode: 0
[2025-10-12 12:28:25] 2025-10-12 10:07:59,117 | INFO     | exeerrordiag: 
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | exitcode: 0
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | exitmsg: OK
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | cpuconsumptiontime: 39751 s
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | nevents: 400
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | neventsw: 0
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | pid: 3206725
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | pgrp: 3206725
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | corecount: 4
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | event service: False
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | sizes: {0: 2348703, 1: 2348845, 5: 2349107, 11: 2349163, 10460: 2377969, 10461: 2386989, 10464: 2387173, 10469: 2387431}
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | --------------------------------------------------
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | 
[2025-10-12 12:28:25] 2025-10-12 10:07:59,118 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 12:28:25] 2025-10-12 10:07:59,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:28:25] 2025-10-12 10:07:59,142 | INFO     | job 6837875280 has completed (purged errors)
[2025-10-12 12:28:25] 2025-10-12 10:07:59,143 | INFO     | overall cleanup function is called
[2025-10-12 12:28:25] 2025-10-12 10:08:00,149 | INFO     | --- collectZombieJob: --- 10, [3206725]
[2025-10-12 12:28:25] 2025-10-12 10:08:00,150 | INFO     | zombie collector waiting for pid 3206725
[2025-10-12 12:28:25] 2025-10-12 10:08:00,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:28:25] 2025-10-12 10:08:00,150 | INFO     | collected zombie processes
[2025-10-12 12:28:25] 2025-10-12 10:08:00,150 | INFO     | will attempt to kill all subprocesses of pid=3206725
[2025-10-12 12:28:25] 2025-10-12 10:08:00,520 | INFO     | process IDs to be killed: [3206725] (in reverse order)
[2025-10-12 12:28:25] 2025-10-12 10:08:00,638 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:28:25] 2025-10-12 10:08:00,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:28:25] 2025-10-12 10:08:00,651 | INFO     | did not find any defunct processes belonging to 3206725
[2025-10-12 12:28:25] 2025-10-12 10:08:00,663 | INFO     | did not find any defunct processes belonging to 3206725
[2025-10-12 12:28:25] 2025-10-12 10:08:00,664 | INFO     | ready for new job
[2025-10-12 12:28:25] 2025-10-12 10:08:00,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:28:25] 2025-10-12 10:08:00,666 | INFO     | ***************************************
[2025-10-12 12:28:25] 2025-10-12 10:08:00,666 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:28:25] 2025-10-12 10:08:00,666 | INFO     | ***************************************
[2025-10-12 12:28:25] 2025-10-12 10:08:00,667 | INFO     | 
[2025-10-12 12:28:25] 2025-10-12 10:08:00,670 | INFO     | architecture information:
[2025-10-12 12:28:25] 2025-10-12 10:08:00,671 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:28:25] 2025-10-12 10:08:00,686 | INFO     | cat /etc/os-release:
[2025-10-12 12:28:25] NAME="CentOS Linux"
[2025-10-12 12:28:25] VERSION="7 (Core)"
[2025-10-12 12:28:25] ID="centos"
[2025-10-12 12:28:25] ID_LIKE="rhel fedora"
[2025-10-12 12:28:25] VERSION_ID="7"
[2025-10-12 12:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:28:25] ANSI_COLOR="0;31"
[2025-10-12 12:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:28:25] HOME_URL="https://www.centos.org/"
[2025-10-12 12:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:28:25] 
[2025-10-12 12:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:28:25] 
[2025-10-12 12:28:25] 2025-10-12 10:08:00,686 | INFO     | ***************************************
[2025-10-12 12:28:25] 2025-10-12 10:08:01,189 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 12:28:25] 2025-10-12 10:08:01,208 | INFO     | sufficient remaining disk space (692505804800 B)
[2025-10-12 12:28:25] 2025-10-12 10:08:01,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:28:25] 2025-10-12 10:08:01,209 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:28:25] 2025-10-12 10:08:01,209 | INFO     | update_server=False
[2025-10-12 12:28:25] 2025-10-12 10:08:01,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:28:25] 2025-10-12 10:08:01,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:28:25] 2025-10-12 10:08:01,210 | INFO     | aborting loop
[2025-10-12 12:28:25] 2025-10-12 10:08:01,636 | INFO     | all payload control threads have been joined
[2025-10-12 12:28:25] 2025-10-12 10:08:01,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:28:25] 2025-10-12 10:08:02,048 | INFO     | all data control threads have been joined
[2025-10-12 12:28:25] 2025-10-12 10:08:02,214 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:02,215 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:02,436 | INFO     | all job control threads have been joined
[2025-10-12 12:28:25] 2025-10-12 10:08:02,500 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:02,641 | INFO     | [payload] control thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:02,790 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,054 | INFO     | [job] validate thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,054 | INFO     | [data] control thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,352 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,411 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,441 | INFO     | [job] control thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,609 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,651 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,767 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:03,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:28:25] 2025-10-12 10:08:04,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:28:25] 2025-10-12 10:08:04,820 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:08,565 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:11,944 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:28:25] 2025-10-12 10:08:12,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:28:25] 2025-10-12 10:08:29,938 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:28:25] 2025-10-12 10:08:31,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22630331475776)>', '<ExcThread(monitor, started 22630092470016)>']
[2025-10-12 12:28:25] 2025-10-12 10:08:31,561 | INFO     | PID=3189779 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:28:25] 2025-10-12 10:08:31,561 | INFO     | .. there are 6 such processes running
[2025-10-12 12:28:25] 2025-10-12 10:08:31,562 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:28:25] 2025-10-12 10:08:31,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:28:25] 2025-10-12 10:08:31,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:28:25] 2025-10-12 10:08:31,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:28:25] 2025-10-12 10:08:31,563 | INFO     | [monitor] control thread has ended
[2025-10-12 12:28:25] 2025-10-12 10:08:36,082 | INFO     | all workflow threads have been joined
[2025-10-12 12:28:25] 2025-10-12 10:08:36,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:28:25] 2025-10-12 10:08:36,083 | INFO     | traces error code: 0
[2025-10-12 12:28:25] 2025-10-12 10:08:36,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:28:25] 2025-10-12 10:08:36,282 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:28:25] 2025-10-12 10:08:36,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:28:25] 2025-10-12 10:08:36,287 [wrapper] pilotpid: 3189779
[2025-10-12 12:28:25] 2025-10-12 10:08:36,290 [wrapper] Pilot exit status: 0
[2025-10-12 12:28:25] 2025-10-12 10:08:36,301 [wrapper] pandaids: 6837875280
[2025-10-12 12:28:25] 2025-10-12 10:08:36,376 [wrapper] cleanup supervisor_pilot 3441017 3189780
[2025-10-12 12:28:25] 2025-10-12 10:08:36,379 [wrapper] Test setup, not cleaning
[2025-10-12 12:28:25] 2025-10-12 10:08:36,382 [wrapper] apfmon messages muted
[2025-10-12 12:28:25] 2025-10-12 10:08:36,384 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:28:25] 2025-10-12 10:08:36,387 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:28:25]  *** Error codes and diagnostics ***
[2025-10-12 12:28:25]     "exeErrorCode": 0,
[2025-10-12 12:28:25]     "exeErrorDiag": "",
[2025-10-12 12:28:25]     "pilotErrorCode": 0,
[2025-10-12 12:28:25]     "pilotErrorDiag": "",
[2025-10-12 12:28:25]  *** Listing of results directory ***
[2025-10-12 12:28:25] total 410608
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc    557409 Oct 11 01:32 pilot3.tar.gz
[2025-10-12 12:28:25] -rwx------ 1 boinc boinc     36292 Oct 11 01:37 runpilot2-wrapper.sh
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc      5112 Oct 11 01:37 queuedata.json
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:28:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:12 run_atlas
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:12 job.xml
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc 221713003 Oct 12 09:13 EVNT.46676267._001909.pool.root.1
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc      6634 Oct 12 09:13 init_data.xml
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:13 start_atlas.sh
[2025-10-12 12:28:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:13 shared
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc    569680 Oct 12 09:13 input.tar.gz
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:13 boinc_lockfile
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc      2549 Oct 12 09:13 pandaJob.out
[2025-10-12 12:28:25] -rw------- 1 boinc boinc    975528 Oct 12 09:13 agis_schedconf.cvmfs.json
[2025-10-12 12:28:25] -rw------- 1 boinc boinc   1560580 Oct 12 09:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:28:25] drwx------ 5 boinc boinc      4096 Oct 12 09:13 pilot3
[2025-10-12 12:28:25] -rw------- 1 boinc boinc 191131504 Oct 12 12:07 HITS.46676269._047282.pool.root.1
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc       528 Oct 12 12:07 boinc_task_state.xml
[2025-10-12 12:28:25] -rw------- 1 boinc boinc      1035 Oct 12 12:07 memory_monitor_summary.json
[2025-10-12 12:28:25] -rw------- 1 boinc boinc    363565 Oct 12 12:07 log.46676269._047282.job.log.tgz.1
[2025-10-12 12:28:25] -rw------- 1 boinc boinc      7834 Oct 12 12:07 heartbeat.json
[2025-10-12 12:28:25] -rw------- 1 boinc boinc        95 Oct 12 12:08 pilot_heartbeat.json
[2025-10-12 12:28:25] -rw------- 1 boinc boinc      4905 Oct 12 12:08 pilotlog.txt
[2025-10-12 12:28:25] -rw------- 1 boinc boinc   1493261 Oct 12 12:08 log.46676269._047282.job.log.1
[2025-10-12 12:28:25] -rw------- 1 boinc boinc       357 Oct 12 12:08 output.list
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:08 runtime_log
[2025-10-12 12:28:25] -rw------- 1 boinc boinc   1873920 Oct 12 12:08 result.tar.gz
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc      9070 Oct 12 12:08 runtime_log.err
[2025-10-12 12:28:25] -rw------- 1 boinc boinc       665 Oct 12 12:08 qgaLDm0qbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPmeNDmvnKxyn.diag
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:28 wrapper_checkpoint.txt
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:28 boinc_mmap_file
[2025-10-12 12:28:25] -rw-r--r-- 1 boinc boinc     20670 Oct 12 12:28 stderr.txt
[2025-10-12 12:28:25] HITS file was successfully produced:
[2025-10-12 12:28:25] -rw------- 1 boinc boinc 191131504 Oct 12 12:07 shared/HITS.pool.root.1
[2025-10-12 12:28:25]  *** Contents of shared directory: ***
[2025-10-12 12:28:25] total 405588
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc 221713003 Oct 12 09:13 ATLAS.root_0
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:13 start_atlas.sh
[2025-10-12 12:28:25] -rw-r--r-- 2 boinc boinc    569680 Oct 12 09:13 input.tar.gz
[2025-10-12 12:28:25] -rw------- 1 boinc boinc 191131504 Oct 12 12:07 HITS.pool.root.1
[2025-10-12 12:28:25] -rw------- 1 boinc boinc   1873920 Oct 12 12:08 result.tar.gz
12:28:27 (3183878): run_atlas exited; CPU time 40143.579746
12:28:27 (3183878): called boinc_finish(0)

</stderr_txt>
]]>

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