Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:09 (3349261): wrapper (7.7.26015): starting
16:26:09 (3349261): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 16:26:09] Arguments: --nthreads 12
[2025-10-11 16:26:09] Threads: 12
[2025-10-11 16:26:09] Checking for CVMFS
[2025-10-11 16:26:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:26:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:26:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:26:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:26:10] 2.13.2.0 8216 23573 252940 151587 1 118 35294698 46080001 52557 130560 0 160446784 99.889 46944278 22638 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-11 16:26:10] CVMFS is ok
[2025-10-11 16:26:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:26:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:26:10] Further information can be found at the LHC@home message board.
[2025-10-11 16:26:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:26:10] Checking for apptainer binary...
[2025-10-11 16:26:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:26:10] Running /usr/bin/apptainer --version
[2025-10-11 16:26:10] apptainer version 1.4.2-1.el9
[2025-10-11 16:26:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:26:11] mff2103.farm.particle.cz
[2025-10-11 16:26:11] apptainer works
[2025-10-11 16:26:11] Set ATHENA_PROC_NUMBER=12
[2025-10-11 16:26:11] Set ATHENA_CORE_NUMBER=12
[2025-10-11 16:26:11] Starting ATLAS job with PandaID=6837669473
[2025-10-11 16:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:14:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:14:43] 2025-10-11 15:29:18,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:19,074 | INFO     | time since job start (3764s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:21,080 | INFO     | time since job start (3766s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:21,189 | INFO     | monitor loop #276: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:21,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:23,087 | INFO     | time since job start (3768s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:23,694 | INFO     | monitor loop #277: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:23,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:25,096 | INFO     | time since job start (3770s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:26,200 | INFO     | monitor loop #278: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:26,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:27,106 | INFO     | time since job start (3772s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:28,723 | INFO     | monitor loop #279: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:28,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:29,083 | INFO     | PID=3358554 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:14:43] 2025-10-11 15:29:29,083 | INFO     | .. there are 86 such processes running
[2025-10-11 18:14:43] 2025-10-11 15:29:30,087 | INFO     | time since job start (3775s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:31,227 | INFO     | monitor loop #280: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:31,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:32,094 | INFO     | time since job start (3777s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:33,736 | INFO     | monitor loop #281: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:33,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:34,099 | INFO     | time since job start (3779s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:36,106 | INFO     | time since job start (3781s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:36,244 | INFO     | monitor loop #282: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:36,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:38,119 | INFO     | time since job start (3783s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:38,752 | INFO     | monitor loop #283: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:38,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:40,125 | INFO     | time since job start (3785s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:41,257 | INFO     | monitor loop #284: job 0:6837669473 is in state 'finished'
[2025-10-11 18:14:43] 2025-10-11 15:29:41,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,132 | INFO     | time since job start (3787s) is within the limit (172800.0s)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,669 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 18:14:43] 2025-10-11 15:29:42,696 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2821.3383541666667
[2025-10-11 18:14:43] 2025-10-11 15:29:42,724 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6837669473/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,725 | INFO     | extracted standard info from prmon json
[2025-10-11 18:14:43] 2025-10-11 15:29:42,726 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:14:43] 2025-10-11 15:29:42,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:14:43] 2025-10-11 15:29:42,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:14:43] 2025-10-11 15:29:42,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:14:43] 2025-10-11 15:29:42,727 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:14:43] 2025-10-11 15:29:42,727 | INFO     | sum of square deviations: 48810217.5
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | sum of deviations: -1788134266.4999998
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | mean x: 1760194792.5
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | mean y: 2788852.537037037
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | -- intersect: 64486513478.10559
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | intersect: 64486513478.10559
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | chi2: 0.014654242326453026
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | -- intersect: 64486513478.10559
[2025-10-11 18:14:43] 2025-10-11 15:29:42,728 | INFO     | current memory leak: -36.63 B/s (using 54 data points, chi2=0.01)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | could have reported an average CPU frequency of 2875 MHz (6 samples)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | ..............................
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . Timing measurements:
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . get job = 0 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . initial setup = 1 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . payload setup = 18 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . stage-in = 0 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . payload execution = 3675 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . stage-out = 1 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | . log creation = 0 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,729 | INFO     | ..............................
[2025-10-11 18:14:43] 2025-10-11 15:29:42,827 | INFO     | 
[2025-10-11 18:14:43] 2025-10-11 15:29:42,827 | INFO     | job summary report
[2025-10-11 18:14:43] 2025-10-11 15:29:42,827 | INFO     | --------------------------------------------------
[2025-10-11 18:14:43] 2025-10-11 15:29:42,827 | INFO     | PanDA job id: 6837669473
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | task id: 46676269
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | errors: (none)
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | pilot state: finished 
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | transexitcode: 0
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | exeerrorcode: 0
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | exeerrordiag: 
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | exitcode: 0
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | exitmsg: OK
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | cpuconsumptiontime: 36667 s
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | nevents: 400
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | neventsw: 0
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | pid: 3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | pgrp: 3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:42,828 | INFO     | corecount: 12
[2025-10-11 18:14:43] 2025-10-11 15:29:42,829 | INFO     | event service: False
[2025-10-11 18:14:43] 2025-10-11 15:29:42,829 | INFO     | sizes: {0: 2348858, 11: 2348858, 15: 2349148, 22: 2349176, 3698: 2375056, 3700: 2384056, 3703: 2384240, 3745: 2384434}
[2025-10-11 18:14:43] 2025-10-11 15:29:42,829 | INFO     | --------------------------------------------------
[2025-10-11 18:14:43] 2025-10-11 15:29:42,829 | INFO     | 
[2025-10-11 18:14:43] 2025-10-11 15:29:42,829 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-10-11 18:14:43] 2025-10-11 15:29:43,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | job 6837669473 has completed (purged errors)
[2025-10-11 18:14:43] 2025-10-11 15:29:43,023 | INFO     | overall cleanup function is called
[2025-10-11 18:14:43] 2025-10-11 15:29:44,032 | INFO     | --- collectZombieJob: --- 10, [3374490]
[2025-10-11 18:14:43] 2025-10-11 15:29:44,033 | INFO     | zombie collector waiting for pid 3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:44,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:14:43] 2025-10-11 15:29:44,033 | INFO     | collected zombie processes
[2025-10-11 18:14:43] 2025-10-11 15:29:44,033 | INFO     | will attempt to kill all subprocesses of pid=3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:45,028 | INFO     | process IDs to be killed: [3374490] (in reverse order)
[2025-10-11 18:14:43] 2025-10-11 15:29:45,446 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:14:43] 2025-10-11 15:29:45,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:14:43] 2025-10-11 15:29:45,479 | INFO     | did not find any defunct processes belonging to 3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:45,516 | INFO     | did not find any defunct processes belonging to 3374490
[2025-10-11 18:14:43] 2025-10-11 15:29:45,516 | INFO     | ready for new job
[2025-10-11 18:14:43] 2025-10-11 15:29:45,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:14:43] 2025-10-11 15:29:45,518 | INFO     | ***************************************
[2025-10-11 18:14:43] 2025-10-11 15:29:45,518 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:14:43] 2025-10-11 15:29:45,518 | INFO     | ***************************************
[2025-10-11 18:14:43] 2025-10-11 15:29:45,518 | INFO     | 
[2025-10-11 18:14:43] 2025-10-11 15:29:45,524 | INFO     | architecture information:
[2025-10-11 18:14:43] 2025-10-11 15:29:45,534 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:14:43] 2025-10-11 15:29:45,563 | INFO     | cat /etc/os-release:
[2025-10-11 18:14:43] NAME="CentOS Linux"
[2025-10-11 18:14:43] VERSION="7 (Core)"
[2025-10-11 18:14:43] ID="centos"
[2025-10-11 18:14:43] ID_LIKE="rhel fedora"
[2025-10-11 18:14:43] VERSION_ID="7"
[2025-10-11 18:14:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:14:43] ANSI_COLOR="0;31"
[2025-10-11 18:14:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:14:43] HOME_URL="https://www.centos.org/"
[2025-10-11 18:14:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:14:43] 
[2025-10-11 18:14:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:14:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:14:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:14:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:14:43] 
[2025-10-11 18:14:43] 2025-10-11 15:29:45,563 | INFO     | ***************************************
[2025-10-11 18:14:43] 2025-10-11 15:29:46,067 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-10-11 18:14:43] 2025-10-11 15:29:46,230 | INFO     | sufficient remaining disk space (1660708454400 B)
[2025-10-11 18:14:43] 2025-10-11 15:29:46,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:14:43] 2025-10-11 15:29:46,230 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:14:43] 2025-10-11 15:29:46,231 | INFO     | update_server=False
[2025-10-11 18:14:43] 2025-10-11 15:29:46,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:14:43] 2025-10-11 15:29:46,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 18:14:43] 2025-10-11 15:29:46,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 18:14:43] 2025-10-11 15:29:46,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:14:43] 2025-10-11 15:29:46,282 | INFO     | will abort loop
[2025-10-11 18:14:43] 2025-10-11 15:29:46,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:14:43] 2025-10-11 15:29:46,687 | INFO     | all payload control threads have been joined
[2025-10-11 18:14:43] 2025-10-11 15:29:47,237 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:47,288 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:47,326 | INFO     | all data control threads have been joined
[2025-10-11 18:14:43] 2025-10-11 15:29:47,364 | INFO     | all job control threads have been joined
[2025-10-11 18:14:43] 2025-10-11 15:29:47,389 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:47,400 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:47,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:14:43] 2025-10-11 15:29:47,693 | INFO     | [payload] control thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:47,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:14:43] 2025-10-11 15:29:48,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,291 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,332 | INFO     | [data] control thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,371 | INFO     | [job] control thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,382 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,421 | INFO     | [job] validate thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,463 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,648 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,691 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:48,848 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:29:51,448 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:14:43] 2025-10-11 15:30:14,145 | INFO     | 3790s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 18:14:43] 2025-10-11 15:30:16,012 | INFO     | PID=3358554 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:14:43] 2025-10-11 15:30:16,012 | INFO     | .. there are 85 such processes running
[2025-10-11 18:14:43] 2025-10-11 15:30:16,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:14:43] 2025-10-11 15:30:16,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:14:43] 2025-10-11 15:30:16,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:14:43] 2025-10-11 15:30:41,377 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:14:43] 2025-10-11 15:30:43,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299848664896)>', '<ExcThread(monitor, started 140298957072128)>']
[2025-10-11 18:14:43] 2025-10-11 15:30:43,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:14:43] 2025-10-11 15:30:43,179 | INFO     | [monitor] control thread has ended
[2025-10-11 18:14:43] 2025-10-11 15:30:48,055 | INFO     | all workflow threads have been joined
[2025-10-11 18:14:43] 2025-10-11 15:30:48,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:14:43] 2025-10-11 15:30:48,055 | INFO     | traces error code: 0
[2025-10-11 18:14:43] 2025-10-11 15:30:48,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:14:43] 2025-10-11 15:30:48,390 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:14:43] 2025-10-11 15:30:48,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:14:43] 2025-10-11 15:30:48,455 [wrapper] pilotpid: 3358554
[2025-10-11 18:14:43] 2025-10-11 15:30:48,477 [wrapper] Pilot exit status: 0
[2025-10-11 18:14:43] 2025-10-11 15:30:48,584 [wrapper] pandaids: 6837669473
[2025-10-11 18:14:43] 2025-10-11 15:30:49,109 [wrapper] cleanup supervisor_pilot 3650327 3358556
[2025-10-11 18:14:43] 2025-10-11 15:30:49,137 [wrapper] Test setup, not cleaning
[2025-10-11 18:14:43] 2025-10-11 15:30:49,152 [wrapper] apfmon messages muted
[2025-10-11 18:14:43] 2025-10-11 15:30:49,170 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:14:43] 2025-10-11 15:30:49,227 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:14:43]  *** Error codes and diagnostics ***
[2025-10-11 18:14:43]     "exeErrorCode": 0,
[2025-10-11 18:14:43]     "exeErrorDiag": "",
[2025-10-11 18:14:43]     "pilotErrorCode": 0,
[2025-10-11 18:14:43]     "pilotErrorDiag": "",
[2025-10-11 18:14:43]  *** Listing of results directory ***
[2025-10-11 18:14:43] total 413384
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc    557409 Oct 10 18:15 pilot3.tar.gz
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc      5112 Oct 10 18:43 queuedata.json
[2025-10-11 18:14:43] -rwx------ 1 boinc boinc     36292 Oct 10 18:43 runpilot2-wrapper.sh
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc       100 Oct 11 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:14:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 16:26 run_atlas
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc       105 Oct 11 16:26 job.xml
[2025-10-11 18:14:43] -rw-r--r-- 2 boinc boinc 220601869 Oct 11 16:26 EVNT.46676267._001693.pool.root.1
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc      6665 Oct 11 16:26 init_data.xml
[2025-10-11 18:14:43] -rw-r--r-- 2 boinc boinc     15120 Oct 11 16:26 start_atlas.sh
[2025-10-11 18:14:43] drwxrwx--x 2 boinc boinc      4096 Oct 11 16:26 shared
[2025-10-11 18:14:43] -rw-r--r-- 2 boinc boinc    569683 Oct 11 16:26 input.tar.gz
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc         0 Oct 11 16:26 boinc_lockfile
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc      2550 Oct 11 16:26 pandaJob.out
[2025-10-11 18:14:43] -rw------- 1 boinc boinc    975536 Oct 11 16:26 agis_schedconf.cvmfs.json
[2025-10-11 18:14:43] -rw------- 1 boinc boinc   1560580 Oct 11 16:26 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:14:43] drwx------ 5 boinc boinc      4096 Oct 11 16:26 pilot3
[2025-10-11 18:14:43] -rw------- 1 boinc boinc 196955509 Oct 11 17:28 HITS.46676269._041768.pool.root.1
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc       528 Oct 11 17:28 boinc_task_state.xml
[2025-10-11 18:14:43] -rw------- 1 boinc boinc      1024 Oct 11 17:28 memory_monitor_summary.json
[2025-10-11 18:14:43] -rw------- 1 boinc boinc    367368 Oct 11 17:28 log.46676269._041768.job.log.tgz.1
[2025-10-11 18:14:43] -rw------- 1 boinc boinc        95 Oct 11 17:29 pilot_heartbeat.json
[2025-10-11 18:14:43] -rw------- 1 boinc boinc      7786 Oct 11 17:29 heartbeat.json
[2025-10-11 18:14:43] -rw------- 1 boinc boinc      5128 Oct 11 17:30 pilotlog.txt
[2025-10-11 18:14:43] -rw------- 1 boinc boinc    555822 Oct 11 17:30 log.46676269._041768.job.log.1
[2025-10-11 18:14:43] -rw------- 1 boinc boinc       357 Oct 11 17:30 output.list
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc       620 Oct 11 17:30 runtime_log
[2025-10-11 18:14:43] -rw------- 1 boinc boinc    942080 Oct 11 17:30 result.tar.gz
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc      8764 Oct 11 17:30 runtime_log.err
[2025-10-11 18:14:43] -rw------- 1 boinc boinc       663 Oct 11 17:30 k3bLDmsOVR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9FQMDm7BDA6n.diag
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc        25 Oct 11 18:14 wrapper_checkpoint.txt
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc      8192 Oct 11 18:14 boinc_mmap_file
[2025-10-11 18:14:43] -rw-r--r-- 1 boinc boinc     22338 Oct 11 18:14 stderr.txt
[2025-10-11 18:14:43] HITS file was successfully produced:
[2025-10-11 18:14:43] -rw------- 1 boinc boinc 196955509 Oct 11 17:28 shared/HITS.pool.root.1
[2025-10-11 18:14:43]  *** Contents of shared directory: ***
[2025-10-11 18:14:44] total 409276
[2025-10-11 18:14:44] -rw-r--r-- 2 boinc boinc 220601869 Oct 11 16:26 ATLAS.root_0
[2025-10-11 18:14:44] -rw-r--r-- 2 boinc boinc     15120 Oct 11 16:26 start_atlas.sh
[2025-10-11 18:14:44] -rw-r--r-- 2 boinc boinc    569683 Oct 11 16:26 input.tar.gz
[2025-10-11 18:14:44] -rw------- 1 boinc boinc 196955509 Oct 11 17:28 HITS.pool.root.1
[2025-10-11 18:14:44] -rw------- 1 boinc boinc    942080 Oct 11 17:30 result.tar.gz
18:14:45 (3349261): run_atlas exited; CPU time 36843.737192
18:14:45 (3349261): called boinc_finish(0)

</stderr_txt>
]]>

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