Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:10:40 (1238909): wrapper (7.7.26015): starting
06:10:40 (1238909): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 06:10:40] Arguments: --nthreads 12
[2025-10-11 06:10:40] Threads: 12
[2025-10-11 06:10:40] Checking for CVMFS
[2025-10-11 06:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:10:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:10:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:10:40] 2.11.0.0 3299214 1244 84248 151574 0 188 5056853 6144001 14656 130560 0 24523597 100.000 47115 222 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 06:10:40] CVMFS is ok
[2025-10-11 06:10:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:10:40] Checking for apptainer binary...
[2025-10-11 06:10:40] apptainer is not installed, using version from CVMFS
[2025-10-11 06:10:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:10:41] radiat0r
[2025-10-11 06:10:41] apptainer works
[2025-10-11 06:10:41] Set ATHENA_PROC_NUMBER=12
[2025-10-11 06:10:41] Set ATHENA_CORE_NUMBER=12
[2025-10-11 06:10:41] Starting ATLAS job with PandaID=6837706757
[2025-10-11 06:10:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:06:08]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:06:08]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-6837706757/log.46676269._043090.job.log.tgz.1
[2025-10-11 07:06:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/b4/log.46676269._043090.job.log.tgz.1
[2025-10-11 07:06:08]  workdir=None
[2025-10-11 07:06:08] ]
[2025-10-11 07:06:08] 2025-10-11 07:04:50,557 | INFO     | transferring file log.46676269._043090.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-6837706757/log.46676269._043090.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 07:06:08] 2025-10-11 07:04:50,557 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-6837706757/log.46676269._043090.job.log.tgz.1 /var/lib/boinc/slots/18/log.46676269._043090.j
[2025-10-11 07:06:08] 2025-10-11 07:04:50,584 | INFO     | adding to output.list: log.46676269._043090.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/b4/log.46676269._043090.job.log.tg
[2025-10-11 07:06:08] 2025-10-11 07:04:50,586 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:06:08] 2025-10-11 07:04:50,586 | INFO     | summary of transferred files:
[2025-10-11 07:06:08] 2025-10-11 07:04:50,586 | INFO     |  -- lfn=log.46676269._043090.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:06:08] 2025-10-11 07:04:50,586 | INFO     | stage-out finished correctly
[2025-10-11 07:06:08] 2025-10-11 07:04:51,545 | INFO     | monitor loop #226: job 0:6837706757 is in state 'finished'
[2025-10-11 07:06:08] 2025-10-11 07:04:51,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:06:08] 2025-10-11 07:04:52,140 | INFO     | time since job start (3234s) is within the limit (172800.0s)
[2025-10-11 07:06:08] 2025-10-11 07:04:53,170 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:06:08] 2025-10-11 07:04:53,262 | INFO     | job 6837706757 has state=finished
[2025-10-11 07:06:08] 2025-10-11 07:04:53,262 | INFO     | preparing for final server update for job 6837706757 in state='finished'
[2025-10-11 07:06:08] 2025-10-11 07:04:53,263 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:06:08] 2025-10-11 07:04:53,263 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:06:08] 2025-10-11 07:04:53,263 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:06:08] 2025-10-11 07:04:53,263 | INFO     | job 6837706757 has finished - writing final server update
[2025-10-11 07:06:08] 2025-10-11 07:04:53,264 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:06:08] 2025-10-11 07:04:53,267 | INFO     | executing command: lscpu
[2025-10-11 07:06:08] 2025-10-11 07:04:53,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:06:08] 2025-10-11 07:04:54,046 | INFO     | monitor loop #227: job 0:6837706757 is in state 'finished'
[2025-10-11 07:06:08] 2025-10-11 07:04:54,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:06:08] 2025-10-11 07:04:54,144 | INFO     | time since job start (3236s) is within the limit (172800.0s)
[2025-10-11 07:06:08] 2025-10-11 07:04:56,147 | INFO     | time since job start (3238s) is within the limit (172800.0s)
[2025-10-11 07:06:08] 2025-10-11 07:04:56,550 | INFO     | monitor loop #228: job 0:6837706757 is in state 'finished'
[2025-10-11 07:06:08] 2025-10-11 07:04:56,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:06:08] 2025-10-11 07:04:58,151 | INFO     | time since job start (3240s) is within the limit (172800.0s)
[2025-10-11 07:06:08] 2025-10-11 07:04:59,053 | INFO     | monitor loop #229: job 0:6837706757 is in state 'finished'
[2025-10-11 07:06:08] 2025-10-11 07:04:59,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,156 | INFO     | time since job start (3242s) is within the limit (172800.0s)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,444 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:06:08] 2025-10-11 07:05:00,509 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2386.705625000001
[2025-10-11 07:06:08] 2025-10-11 07:05:00,581 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6837706757/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,582 | INFO     | extracted standard info from prmon json
[2025-10-11 07:06:08] 2025-10-11 07:05:00,582 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:06:08] 2025-10-11 07:05:00,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:06:08] 2025-10-11 07:05:00,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:06:08] 2025-10-11 07:05:00,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:06:08] 2025-10-11 07:05:00,585 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:06:08] 2025-10-11 07:05:00,585 | INFO     | sum of square deviations: 30168007.5
[2025-10-11 07:06:08] 2025-10-11 07:05:00,585 | INFO     | sum of deviations: 551337977.5
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | mean x: 1760164769.5
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | mean y: 2662815.847826087
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | -- intersect: -32165377585.324963
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | intersect: -32165377585.324963
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | chi2: 0.00022165474115600777
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | -- intersect: -32165377585.324963
[2025-10-11 07:06:08] 2025-10-11 07:05:00,586 | INFO     | current memory leak: 18.28 B/s (using 46 data points, chi2=0.00)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | could have reported an average CPU frequency of 2387 MHz (5 samples)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | ..............................
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . Timing measurements:
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . get job = 0 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . initial setup = 3 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . payload setup = 8 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . stage-in = 0 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . payload execution = 3199 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,587 | INFO     | . stage-out = 0 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,588 | INFO     | . log creation = 0 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,588 | INFO     | ..............................
[2025-10-11 07:06:08] 2025-10-11 07:05:00,693 | INFO     | 
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | job summary report
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | --------------------------------------------------
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | PanDA job id: 6837706757
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | task id: 46676269
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | errors: (none)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | pilot state: finished 
[2025-10-11 07:06:08] 2025-10-11 07:05:00,694 | INFO     | transexitcode: 0
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | exeerrorcode: 0
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | exeerrordiag: 
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | exitcode: 0
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | exitmsg: OK
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | cpuconsumptiontime: 34474 s
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | nevents: 400
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | neventsw: 0
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | pid: 1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | pgrp: 1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | corecount: 12
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | event service: False
[2025-10-11 07:06:08] 2025-10-11 07:05:00,695 | INFO     | sizes: {0: 2348029, 1: 2348886, 9: 2349148, 12: 2349176, 3211: 2374775, 3214: 2383775, 3217: 2383959, 3224: 2384185}
[2025-10-11 07:06:08] 2025-10-11 07:05:00,696 | INFO     | --------------------------------------------------
[2025-10-11 07:06:08] 2025-10-11 07:05:00,696 | INFO     | 
[2025-10-11 07:06:08] 2025-10-11 07:05:00,696 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-10-11 07:06:08] 2025-10-11 07:05:00,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:06:08] 2025-10-11 07:05:00,730 | INFO     | job 6837706757 has completed (purged errors)
[2025-10-11 07:06:08] 2025-10-11 07:05:00,730 | INFO     | overall cleanup function is called
[2025-10-11 07:06:08] 2025-10-11 07:05:01,738 | INFO     | --- collectZombieJob: --- 10, [1251759]
[2025-10-11 07:06:08] 2025-10-11 07:05:01,739 | INFO     | zombie collector waiting for pid 1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:01,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:06:08] 2025-10-11 07:05:01,739 | INFO     | collected zombie processes
[2025-10-11 07:06:08] 2025-10-11 07:05:01,739 | INFO     | will attempt to kill all subprocesses of pid=1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:02,621 | INFO     | process IDs to be killed: [1251759] (in reverse order)
[2025-10-11 07:06:08] 2025-10-11 07:05:02,908 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:06:08] 2025-10-11 07:05:02,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:06:08] 2025-10-11 07:05:02,939 | INFO     | did not find any defunct processes belonging to 1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:02,964 | INFO     | did not find any defunct processes belonging to 1251759
[2025-10-11 07:06:08] 2025-10-11 07:05:02,965 | INFO     | ready for new job
[2025-10-11 07:06:08] 2025-10-11 07:05:02,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:06:08] 2025-10-11 07:05:02,971 | INFO     | ***************************************
[2025-10-11 07:06:08] 2025-10-11 07:05:02,971 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:06:08] 2025-10-11 07:05:02,971 | INFO     | ***************************************
[2025-10-11 07:06:08] 2025-10-11 07:05:02,971 | INFO     | 
[2025-10-11 07:06:08] 2025-10-11 07:05:03,012 | INFO     | architecture information:
[2025-10-11 07:06:08] 2025-10-11 07:05:03,013 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:06:08] 2025-10-11 07:05:03,040 | INFO     | cat /etc/os-release:
[2025-10-11 07:06:08] NAME="CentOS Linux"
[2025-10-11 07:06:08] VERSION="7 (Core)"
[2025-10-11 07:06:08] ID="centos"
[2025-10-11 07:06:08] ID_LIKE="rhel fedora"
[2025-10-11 07:06:08] VERSION_ID="7"
[2025-10-11 07:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:06:08] ANSI_COLOR="0;31"
[2025-10-11 07:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:06:08] HOME_URL="https://www.centos.org/"
[2025-10-11 07:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:06:08] 
[2025-10-11 07:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:06:08] 
[2025-10-11 07:06:08] 2025-10-11 07:05:03,040 | INFO     | ***************************************
[2025-10-11 07:06:08] 2025-10-11 07:05:03,543 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-10-11 07:06:08] 2025-10-11 07:05:03,570 | INFO     | sufficient remaining disk space (1725348970496 B)
[2025-10-11 07:06:08] 2025-10-11 07:05:03,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:06:08] 2025-10-11 07:05:03,571 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:06:08] 2025-10-11 07:05:03,571 | INFO     | update_server=False
[2025-10-11 07:06:08] 2025-10-11 07:05:03,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:06:08] 2025-10-11 07:05:03,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:06:08] 2025-10-11 07:05:03,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:06:08] 2025-10-11 07:05:03,798 | INFO     | all payload control threads have been joined
[2025-10-11 07:06:08] 2025-10-11 07:05:04,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 07:06:08] 2025-10-11 07:05:04,062 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 07:06:08] 2025-10-11 07:05:04,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:06:08] 2025-10-11 07:05:04,062 | INFO     | will abort loop
[2025-10-11 07:06:08] 2025-10-11 07:05:04,574 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:04,590 | INFO     | all data control threads have been joined
[2025-10-11 07:06:08] 2025-10-11 07:05:04,730 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:04,804 | INFO     | [payload] control thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:04,842 | INFO     | all job control threads have been joined
[2025-10-11 07:06:08] 2025-10-11 07:05:04,846 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,000 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,066 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,175 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,426 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,594 | INFO     | [data] control thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:06:08] 2025-10-11 07:05:05,710 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,846 | INFO     | [job] control thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,930 | INFO     | [job] validate thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:05,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:06,150 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:06,702 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:07,774 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:06:08] 2025-10-11 07:05:34,246 | INFO     | PID=1243615 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 07:06:08] 2025-10-11 07:05:34,246 | INFO     | .. there are 17 such processes running
[2025-10-11 07:06:08] 2025-10-11 07:05:34,247 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:06:08] 2025-10-11 07:05:34,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:06:08] 2025-10-11 07:05:34,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:06:08] 2025-10-11 07:06:02,774 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:06:08] 2025-10-11 07:06:03,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668520007488)>', '<ExcThread(monitor, started 139668083427072)>']
[2025-10-11 07:06:08] 2025-10-11 07:06:04,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:06:08] 2025-10-11 07:06:04,364 | INFO     | [monitor] control thread has ended
[2025-10-11 07:06:08] 2025-10-11 07:06:08,534 | INFO     | all workflow threads have been joined
[2025-10-11 07:06:08] 2025-10-11 07:06:08,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:06:08] 2025-10-11 07:06:08,535 | INFO     | traces error code: 0
[2025-10-11 07:06:08] 2025-10-11 07:06:08,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:06:08] 2025-10-11 07:06:08,714 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:06:08] 2025-10-11 07:06:08,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:06:08] 2025-10-11 07:06:08,720 [wrapper] pilotpid: 1243615
[2025-10-11 07:06:08] 2025-10-11 07:06:08,723 [wrapper] Pilot exit status: 0
[2025-10-11 07:06:08] 2025-10-11 07:06:08,735 [wrapper] pandaids: 6837706757
[2025-10-11 07:06:08] 2025-10-11 07:06:08,862 [wrapper] cleanup supervisor_pilot 1583945 1243616
[2025-10-11 07:06:08] 2025-10-11 07:06:08,865 [wrapper] Test setup, not cleaning
[2025-10-11 07:06:08] 2025-10-11 07:06:08,867 [wrapper] apfmon messages muted
[2025-10-11 07:06:08] 2025-10-11 07:06:08,869 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:06:08] 2025-10-11 07:06:08,871 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:06:08]  *** Error codes and diagnostics ***
[2025-10-11 07:06:08]     "exeErrorCode": 0,
[2025-10-11 07:06:08]     "exeErrorDiag": "",
[2025-10-11 07:06:08]     "pilotErrorCode": 0,
[2025-10-11 07:06:08]     "pilotErrorDiag": "",
[2025-10-11 07:06:08]  *** Listing of results directory ***
[2025-10-11 07:06:08] total 415796
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc    557409 Oct 10 18:18 pilot3.tar.gz
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc      5112 Oct 10 18:19 queuedata.json
[2025-10-11 07:06:08] -rwx------ 1 boinc boinc     36292 Oct 10 18:20 runpilot2-wrapper.sh
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc       100 Oct 11 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:06:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 06:10 run_atlas
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc       105 Oct 11 06:10 job.xml
[2025-10-11 07:06:08] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:10 start_atlas.sh
[2025-10-11 07:06:08] drwxrwx--x 2 boinc boinc      4096 Oct 11 06:10 shared
[2025-10-11 07:06:08] -rw-r--r-- 2 boinc boinc    569685 Oct 11 06:10 input.tar.gz
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc      9396 Oct 11 06:10 init_data.xml
[2025-10-11 07:06:08] -rw-r--r-- 2 boinc boinc 222679228 Oct 11 06:10 EVNT.46676267._001745.pool.root.1
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:10 boinc_setup_complete
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:10 boinc_lockfile
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc      2550 Oct 11 06:10 pandaJob.out
[2025-10-11 07:06:08] -rw------- 1 boinc boinc    975533 Oct 11 06:10 agis_schedconf.cvmfs.json
[2025-10-11 07:06:08] -rw------- 1 boinc boinc   1560580 Oct 11 06:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:06:08] drwx------ 5 boinc boinc      4096 Oct 11 06:10 pilot3
[2025-10-11 07:06:08] -rw------- 1 boinc boinc 197516300 Oct 11 07:04 HITS.46676269._043090.pool.root.1
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc       529 Oct 11 07:04 boinc_task_state.xml
[2025-10-11 07:06:08] -rw------- 1 boinc boinc        95 Oct 11 07:04 pilot_heartbeat.json
[2025-10-11 07:06:08] -rw------- 1 boinc boinc      1026 Oct 11 07:04 memory_monitor_summary.json
[2025-10-11 07:06:08] -rw------- 1 boinc boinc    355357 Oct 11 07:04 log.46676269._043090.job.log.tgz.1
[2025-10-11 07:06:08] -rw------- 1 boinc boinc      7743 Oct 11 07:05 heartbeat.json
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc      8192 Oct 11 07:06 boinc_mmap_file
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc        27 Oct 11 07:06 wrapper_checkpoint.txt
[2025-10-11 07:06:08] -rw------- 1 boinc boinc      5014 Oct 11 07:06 pilotlog.txt
[2025-10-11 07:06:08] -rw------- 1 boinc boinc    479864 Oct 11 07:06 log.46676269._043090.job.log.1
[2025-10-11 07:06:08] -rw------- 1 boinc boinc       357 Oct 11 07:06 output.list
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc       620 Oct 11 07:06 runtime_log
[2025-10-11 07:06:08] -rw------- 1 boinc boinc    849920 Oct 11 07:06 result.tar.gz
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc      8672 Oct 11 07:06 runtime_log.err
[2025-10-11 07:06:08] -rw------- 1 boinc boinc       643 Oct 11 07:06 gHnLDmwtWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH6dNDmmRoHSo.diag
[2025-10-11 07:06:08] -rw-r--r-- 1 boinc boinc     21995 Oct 11 07:06 stderr.txt
[2025-10-11 07:06:09] HITS file was successfully produced:
[2025-10-11 07:06:09] -rw------- 1 boinc boinc 197516300 Oct 11 07:04 shared/HITS.pool.root.1
[2025-10-11 07:06:09]  *** Contents of shared directory: ***
[2025-10-11 07:06:09] total 411768
[2025-10-11 07:06:09] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:10 start_atlas.sh
[2025-10-11 07:06:09] -rw-r--r-- 2 boinc boinc    569685 Oct 11 06:10 input.tar.gz
[2025-10-11 07:06:09] -rw-r--r-- 2 boinc boinc 222679228 Oct 11 06:10 ATLAS.root_0
[2025-10-11 07:06:09] -rw------- 1 boinc boinc 197516300 Oct 11 07:04 HITS.pool.root.1
[2025-10-11 07:06:09] -rw------- 1 boinc boinc    849920 Oct 11 07:06 result.tar.gz
07:06:10 (1238909): run_atlas exited; CPU time 34689.375840
07:06:10 (1238909): called boinc_finish(0)

</stderr_txt>
]]>

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