Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:09:06 (1215127): wrapper (7.7.26015): starting
06:09:06 (1215127): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 06:09:06] Arguments: --nthreads 12
[2025-10-11 06:09:06] Threads: 12
[2025-10-11 06:09:06] Checking for CVMFS
[2025-10-11 06:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:09:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:09:07] 2.11.0.0 3299214 1242 85264 151574 1 188 5056853 6144001 14528 130560 0 24470671 100.000 47115 222 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 06:09:07] CVMFS is ok
[2025-10-11 06:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:09:07] Checking for apptainer binary...
[2025-10-11 06:09:07] apptainer is not installed, using version from CVMFS
[2025-10-11 06:09:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:09:07] radiat0r
[2025-10-11 06:09:07] apptainer works
[2025-10-11 06:09:07] Set ATHENA_PROC_NUMBER=12
[2025-10-11 06:09:07] Set ATHENA_CORE_NUMBER=12
[2025-10-11 06:09:07] Starting ATLAS job with PandaID=6837732008
[2025-10-11 06:09:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:04:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:04:48] 2025-10-11 07:04:01,988 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/15/PanDA_Pilot-6837732008/log.46676269._044322.job.log.tgz.1 /var/lib/boinc/slots/15/log.46676269._044322.j
[2025-10-11 07:04:48] 2025-10-11 07:04:02,016 | INFO     | adding to output.list: log.46676269._044322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/80/log.46676269._044322.job.log.tg
[2025-10-11 07:04:48] 2025-10-11 07:04:02,017 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:04:48] 2025-10-11 07:04:02,017 | INFO     | summary of transferred files:
[2025-10-11 07:04:48] 2025-10-11 07:04:02,017 | INFO     |  -- lfn=log.46676269._044322.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:04:48] 2025-10-11 07:04:02,017 | INFO     | stage-out finished correctly
[2025-10-11 07:04:48] 2025-10-11 07:04:02,106 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:04:48] 2025-10-11 07:04:02,747 | INFO     | time since job start (3281s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:03,748 | INFO     | monitor loop #228: job 0:6837732008 is in state 'finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:03,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:04:48] 2025-10-11 07:04:04,447 | INFO     | job 6837732008 has state=finished
[2025-10-11 07:04:48] 2025-10-11 07:04:04,448 | INFO     | preparing for final server update for job 6837732008 in state='finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:04,448 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:04:48] 2025-10-11 07:04:04,448 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:04:48] 2025-10-11 07:04:04,449 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:04:48] 2025-10-11 07:04:04,449 | INFO     | job 6837732008 has finished - writing final server update
[2025-10-11 07:04:48] 2025-10-11 07:04:04,449 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:04:48] 2025-10-11 07:04:04,451 | INFO     | executing command: lscpu
[2025-10-11 07:04:48] 2025-10-11 07:04:04,634 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:04:48] 2025-10-11 07:04:04,751 | INFO     | time since job start (3283s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:06,251 | INFO     | monitor loop #229: job 0:6837732008 is in state 'finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:06,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:04:48] 2025-10-11 07:04:06,756 | INFO     | time since job start (3285s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:08,754 | INFO     | monitor loop #230: job 0:6837732008 is in state 'finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:08,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:04:48] 2025-10-11 07:04:08,759 | INFO     | time since job start (3287s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:08,759 | INFO     | 3290s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 07:04:48] 2025-10-11 07:04:10,764 | INFO     | time since job start (3289s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:11,258 | INFO     | monitor loop #231: job 0:6837732008 is in state 'finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:11,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:04:48] 2025-10-11 07:04:12,803 | INFO     | PID=1219863 has CPU usage=19.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 07:04:48] 2025-10-11 07:04:12,804 | INFO     | .. there are 17 such processes running
[2025-10-11 07:04:48] 2025-10-11 07:04:13,761 | INFO     | monitor loop #232: job 0:6837732008 is in state 'finished'
[2025-10-11 07:04:48] 2025-10-11 07:04:13,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:04:48] 2025-10-11 07:04:13,805 | INFO     | time since job start (3292s) is within the limit (172800.0s)
[2025-10-11 07:04:48] 2025-10-11 07:04:13,880 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:04:48] 2025-10-11 07:04:13,942 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2324.605124999999
[2025-10-11 07:04:48] 2025-10-11 07:04:14,032 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6837732008/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,032 | INFO     | extracted standard info from prmon json
[2025-10-11 07:04:48] 2025-10-11 07:04:14,033 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:04:48] 2025-10-11 07:04:14,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:04:48] 2025-10-11 07:04:14,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:04:48] 2025-10-11 07:04:14,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | sum of square deviations: 32179208.0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | sum of deviations: 1206296411.0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | mean x: 1760164703.0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | mean y: 2650121.510638298
[2025-10-11 07:04:48] 2025-10-11 07:04:14,035 | INFO     | -- intersect: -65980340012.91967
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | intersect: -65980340012.91967
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | chi2: 0.03943042612142686
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | -- intersect: -65980340012.91967
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | current memory leak: 37.49 B/s (using 47 data points, chi2=0.04)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | could have reported an average CPU frequency of 2361 MHz (5 samples)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,036 | INFO     | ..............................
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . Timing measurements:
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . get job = 0 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . initial setup = 3 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . payload setup = 7 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . stage-in = 0 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . payload execution = 3248 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . stage-out = 0 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | . log creation = 0 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,037 | INFO     | ..............................
[2025-10-11 07:04:48] 2025-10-11 07:04:14,133 | INFO     | 
[2025-10-11 07:04:48] 2025-10-11 07:04:14,133 | INFO     | job summary report
[2025-10-11 07:04:48] 2025-10-11 07:04:14,133 | INFO     | --------------------------------------------------
[2025-10-11 07:04:48] 2025-10-11 07:04:14,133 | INFO     | PanDA job id: 6837732008
[2025-10-11 07:04:48] 2025-10-11 07:04:14,133 | INFO     | task id: 46676269
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | errors: (none)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | pilot state: finished 
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | transexitcode: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | exeerrorcode: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | exeerrordiag: 
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | exitcode: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | exitmsg: OK
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | cpuconsumptiontime: 33809 s
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | nevents: 400
[2025-10-11 07:04:48] 2025-10-11 07:04:14,134 | INFO     | neventsw: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | pid: 1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | pgrp: 1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | corecount: 12
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | event service: False
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | sizes: {0: 2348631, 1: 2348886, 8: 2349148, 12: 2349176, 3260: 2374919, 3261: 2383919, 3262: 2384103, 3273: 2384329}
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | --------------------------------------------------
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | 
[2025-10-11 07:04:48] 2025-10-11 07:04:14,135 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-11 07:04:48] 2025-10-11 07:04:14,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:04:48] 2025-10-11 07:04:14,172 | INFO     | job 6837732008 has completed (purged errors)
[2025-10-11 07:04:48] 2025-10-11 07:04:14,173 | INFO     | overall cleanup function is called
[2025-10-11 07:04:48] 2025-10-11 07:04:15,182 | INFO     | --- collectZombieJob: --- 10, [1228124]
[2025-10-11 07:04:48] 2025-10-11 07:04:15,182 | INFO     | zombie collector waiting for pid 1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:15,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:04:48] 2025-10-11 07:04:15,183 | INFO     | collected zombie processes
[2025-10-11 07:04:48] 2025-10-11 07:04:15,183 | INFO     | will attempt to kill all subprocesses of pid=1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:16,045 | INFO     | process IDs to be killed: [1228124] (in reverse order)
[2025-10-11 07:04:48] 2025-10-11 07:04:16,322 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:04:48] 2025-10-11 07:04:16,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:04:48] 2025-10-11 07:04:16,353 | INFO     | did not find any defunct processes belonging to 1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:16,378 | INFO     | did not find any defunct processes belonging to 1228124
[2025-10-11 07:04:48] 2025-10-11 07:04:16,379 | INFO     | ready for new job
[2025-10-11 07:04:48] 2025-10-11 07:04:16,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:04:48] 2025-10-11 07:04:16,381 | INFO     | ***************************************
[2025-10-11 07:04:48] 2025-10-11 07:04:16,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:04:48] 2025-10-11 07:04:16,381 | INFO     | ***************************************
[2025-10-11 07:04:48] 2025-10-11 07:04:16,381 | INFO     | 
[2025-10-11 07:04:48] 2025-10-11 07:04:16,420 | INFO     | architecture information:
[2025-10-11 07:04:48] 2025-10-11 07:04:16,421 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:04:48] 2025-10-11 07:04:16,444 | INFO     | cat /etc/os-release:
[2025-10-11 07:04:48] NAME="CentOS Linux"
[2025-10-11 07:04:48] VERSION="7 (Core)"
[2025-10-11 07:04:48] ID="centos"
[2025-10-11 07:04:48] ID_LIKE="rhel fedora"
[2025-10-11 07:04:48] VERSION_ID="7"
[2025-10-11 07:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:04:48] ANSI_COLOR="0;31"
[2025-10-11 07:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:04:48] HOME_URL="https://www.centos.org/"
[2025-10-11 07:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:04:48] 
[2025-10-11 07:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:04:48] 
[2025-10-11 07:04:48] 2025-10-11 07:04:16,445 | INFO     | ***************************************
[2025-10-11 07:04:48] 2025-10-11 07:04:16,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-11 07:04:48] 2025-10-11 07:04:16,976 | INFO     | sufficient remaining disk space (1725385670656 B)
[2025-10-11 07:04:48] 2025-10-11 07:04:16,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:04:48] 2025-10-11 07:04:16,977 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:04:48] 2025-10-11 07:04:16,977 | INFO     | update_server=False
[2025-10-11 07:04:48] 2025-10-11 07:04:16,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:04:48] 2025-10-11 07:04:17,158 | INFO     | all data control threads have been joined
[2025-10-11 07:04:48] 2025-10-11 07:04:17,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:04:48] 2025-10-11 07:04:17,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:04:48] 2025-10-11 07:04:17,271 | INFO     | aborting loop
[2025-10-11 07:04:48] 2025-10-11 07:04:17,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:04:48] 2025-10-11 07:04:17,646 | INFO     | all payload control threads have been joined
[2025-10-11 07:04:48] 2025-10-11 07:04:17,978 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,014 | INFO     | [job] validate thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,128 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,162 | INFO     | [data] control thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,276 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,304 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,358 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,474 | INFO     | all job control threads have been joined
[2025-10-11 07:04:48] 2025-10-11 07:04:18,651 | INFO     | [payload] control thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:18,920 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:19,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:04:48] 2025-10-11 07:04:19,221 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:19,304 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:19,478 | INFO     | [job] control thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:19,630 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:20,149 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:21,222 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:26,122 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:04:48] 2025-10-11 07:04:27,248 | INFO     | job.realtimelogging is not enabled
[2025-10-11 07:04:48] 2025-10-11 07:04:28,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:04:48] 2025-10-11 07:04:28,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069542852416)>', '<ExcThread(monitor, started 140069235037952)>']
[2025-10-11 07:04:48] 2025-10-11 07:04:33,437 | INFO     | all workflow threads have been joined
[2025-10-11 07:04:48] 2025-10-11 07:04:33,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:04:48] 2025-10-11 07:04:33,440 | INFO     | traces error code: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:33,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:04:48] 2025-10-11 07:04:47,852 | INFO     | PID=1219863 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:04:48] 2025-10-11 07:04:47,852 | INFO     | .. there are 17 such processes running
[2025-10-11 07:04:48] 2025-10-11 07:04:47,852 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:04:48] 2025-10-11 07:04:47,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:04:48] 2025-10-11 07:04:47,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:04:48] 2025-10-11 07:04:47,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:04:48] 2025-10-11 07:04:47,853 | INFO     | [monitor] control thread has ended
[2025-10-11 07:04:48] 2025-10-11 07:04:48,009 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:04:48] 2025-10-11 07:04:48,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:04:48] 2025-10-11 07:04:48,017 [wrapper] pilotpid: 1219863
[2025-10-11 07:04:48] 2025-10-11 07:04:48,021 [wrapper] Pilot exit status: 0
[2025-10-11 07:04:48] 2025-10-11 07:04:48,034 [wrapper] pandaids: 6837732008
[2025-10-11 07:04:48] 2025-10-11 07:04:48,213 [wrapper] cleanup supervisor_pilot 1562377 1219864
[2025-10-11 07:04:48] 2025-10-11 07:04:48,217 [wrapper] Test setup, not cleaning
[2025-10-11 07:04:48] 2025-10-11 07:04:48,220 [wrapper] apfmon messages muted
[2025-10-11 07:04:48] 2025-10-11 07:04:48,224 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:04:48] 2025-10-11 07:04:48,228 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:04:48]  *** Error codes and diagnostics ***
[2025-10-11 07:04:48]     "exeErrorCode": 0,
[2025-10-11 07:04:48]     "exeErrorDiag": "",
[2025-10-11 07:04:48]     "pilotErrorCode": 0,
[2025-10-11 07:04:48]     "pilotErrorDiag": "",
[2025-10-11 07:04:48]  *** Listing of results directory ***
[2025-10-11 07:04:48] total 416024
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc    557409 Oct 10 19:36 pilot3.tar.gz
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc      5112 Oct 10 19:49 queuedata.json
[2025-10-11 07:04:48] -rwx------ 1 boinc boinc     36292 Oct 10 19:50 runpilot2-wrapper.sh
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc       100 Oct 11 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:04:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 06:09 run_atlas
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc       105 Oct 11 06:09 job.xml
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc 220838496 Oct 11 06:09 EVNT.46676267._001794.pool.root.1
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:09 start_atlas.sh
[2025-10-11 07:04:48] drwxrwx--x 2 boinc boinc      4096 Oct 11 06:09 shared
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc    569682 Oct 11 06:09 input.tar.gz
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc      9396 Oct 11 06:09 init_data.xml
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:09 boinc_setup_complete
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:09 boinc_lockfile
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc      2550 Oct 11 06:09 pandaJob.out
[2025-10-11 07:04:48] -rw------- 1 boinc boinc    975533 Oct 11 06:09 agis_schedconf.cvmfs.json
[2025-10-11 07:04:48] -rw------- 1 boinc boinc   1560580 Oct 11 06:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:04:48] drwx------ 5 boinc boinc      4096 Oct 11 06:09 pilot3
[2025-10-11 07:04:48] -rw------- 1 boinc boinc 199583022 Oct 11 07:03 HITS.46676269._044322.pool.root.1
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc       529 Oct 11 07:03 boinc_task_state.xml
[2025-10-11 07:04:48] -rw------- 1 boinc boinc      1026 Oct 11 07:03 memory_monitor_summary.json
[2025-10-11 07:04:48] -rw------- 1 boinc boinc    355528 Oct 11 07:04 log.46676269._044322.job.log.tgz.1
[2025-10-11 07:04:48] -rw------- 1 boinc boinc        95 Oct 11 07:04 pilot_heartbeat.json
[2025-10-11 07:04:48] -rw------- 1 boinc boinc      7743 Oct 11 07:04 heartbeat.json
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc      8192 Oct 11 07:04 boinc_mmap_file
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc        27 Oct 11 07:04 wrapper_checkpoint.txt
[2025-10-11 07:04:48] -rw------- 1 boinc boinc       823 Oct 11 07:04 pilotlog.txt
[2025-10-11 07:04:48] -rw------- 1 boinc boinc    485811 Oct 11 07:04 log.46676269._044322.job.log.1
[2025-10-11 07:04:48] -rw------- 1 boinc boinc       357 Oct 11 07:04 output.list
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc       620 Oct 11 07:04 runtime_log
[2025-10-11 07:04:48] -rw------- 1 boinc boinc    860160 Oct 11 07:04 result.tar.gz
[2025-10-11 07:04:48] -rw------- 1 boinc boinc       643 Oct 11 07:04 Z76MDmPJYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJKeNDmsiPQGo.diag
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc      8672 Oct 11 07:04 runtime_log.err
[2025-10-11 07:04:48] -rw-r--r-- 1 boinc boinc     22159 Oct 11 07:04 stderr.txt
[2025-10-11 07:04:48] HITS file was successfully produced:
[2025-10-11 07:04:48] -rw------- 1 boinc boinc 199583022 Oct 11 07:03 shared/HITS.pool.root.1
[2025-10-11 07:04:48]  *** Contents of shared directory: ***
[2025-10-11 07:04:48] total 411996
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc 220838496 Oct 11 06:09 ATLAS.root_0
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:09 start_atlas.sh
[2025-10-11 07:04:48] -rw-r--r-- 2 boinc boinc    569682 Oct 11 06:09 input.tar.gz
[2025-10-11 07:04:48] -rw------- 1 boinc boinc 199583022 Oct 11 07:03 HITS.pool.root.1
[2025-10-11 07:04:48] -rw------- 1 boinc boinc    860160 Oct 11 07:04 result.tar.gz
07:04:49 (1215127): run_atlas exited; CPU time 34021.885269
07:04:49 (1215127): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN