Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:00:51 (2268627): wrapper (7.7.26015): starting
01:00:51 (2268627): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 01:00:51] Arguments: --nthreads 8
[2025-10-11 01:00:51] Threads: 8
[2025-10-11 01:00:51] Checking for CVMFS
[2025-10-11 01:00:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 01:00:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 01:00:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 01:00:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 01:00:52] 2.13.2.0 3269412 33839 364800 151572 3 531 31845769 40960001 61180 16776704 0 426480348 99.837 180952388 36792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 01:00:52] CVMFS is ok
[2025-10-11 01:00:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 01:00:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 01:00:52] Further information can be found at the LHC@home message board.
[2025-10-11 01:00:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 01:00:52] Checking for apptainer binary...
[2025-10-11 01:00:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 01:00:52] Running /usr/bin/apptainer --version
[2025-10-11 01:00:52] apptainer version 1.4.3-1.el9
[2025-10-11 01:00:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 01:00:52] c8-16-2.aglt2.org
[2025-10-11 01:00:52] apptainer works
[2025-10-11 01:00:52] Set ATHENA_PROC_NUMBER=8
[2025-10-11 01:00:52] Set ATHENA_CORE_NUMBER=8
[2025-10-11 01:00:52] Starting ATLAS job with PandaID=6837706256
[2025-10-11 01:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:14:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:14:52] 2025-10-11 06:13:38,596 | INFO     | monitor loop #280: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:38,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:39,363 | INFO     | time since job start (4344s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:41,104 | INFO     | monitor loop #281: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:41,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:41,370 | INFO     | time since job start (4346s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:43,377 | INFO     | time since job start (4348s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:43,609 | INFO     | monitor loop #282: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:43,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:45,387 | INFO     | time since job start (4350s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:46,114 | INFO     | monitor loop #283: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:46,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:48,621 | INFO     | monitor loop #284: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:48,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:48,700 | INFO     | PID=2276311 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 02:14:52] 2025-10-11 06:13:48,700 | INFO     | .. there are 71 such processes running
[2025-10-11 02:14:52] 2025-10-11 06:13:49,701 | INFO     | time since job start (4354s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:49,701 | INFO     | 4357s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 02:14:52] 2025-10-11 06:13:51,143 | INFO     | monitor loop #285: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:51,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:51,711 | INFO     | time since job start (4356s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:53,648 | INFO     | monitor loop #286: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:53,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:53,721 | INFO     | time since job start (4358s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:55,728 | INFO     | time since job start (4360s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:56,157 | INFO     | monitor loop #287: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:56,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:57,734 | INFO     | time since job start (4362s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:13:58,674 | INFO     | monitor loop #288: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:13:58,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:13:59,746 | INFO     | time since job start (4364s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:14:01,194 | INFO     | monitor loop #289: job 0:6837706256 is in state 'finished'
[2025-10-11 02:14:52] 2025-10-11 06:14:01,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:14:52] 2025-10-11 06:14:01,752 | INFO     | time since job start (4366s) is within the limit (172800.0s)
[2025-10-11 02:14:52] 2025-10-11 06:14:01,925 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 02:14:52] 2025-10-11 06:14:01,977 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.990171874993
[2025-10-11 02:14:52] 2025-10-11 06:14:02,013 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837706256/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,014 | INFO     | extracted standard info from prmon json
[2025-10-11 02:14:52] 2025-10-11 06:14:02,014 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 02:14:52] 2025-10-11 06:14:02,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 02:14:52] 2025-10-11 06:14:02,014 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:14:52] 2025-10-11 06:14:02,014 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:14:52] 2025-10-11 06:14:02,015 | INFO     | fitting pss+swap vs Time
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | sum of square deviations: 81266640.0
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | sum of deviations: 1341097779.5
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | mean x: 1760161156.5
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | mean y: 2159209.109375
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | -- intersect: -29044793126.366806
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | intersect: -29044793126.366806
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | chi2: 0.014906528201108
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | -- intersect: -29044793126.366806
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | current memory leak: 16.50 B/s (using 64 data points, chi2=0.01)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,016 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | ..............................
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . Timing measurements:
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . get job = 0 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . initial setup = 2 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . payload setup = 11 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . stage-in = 0 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . payload execution = 4287 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . stage-out = 1 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | . log creation = 0 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,017 | INFO     | ..............................
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | 
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | job summary report
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | --------------------------------------------------
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | PanDA job id: 6837706256
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | task id: 46676269
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | errors: (none)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | pilot state: finished 
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | transexitcode: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | exeerrorcode: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | exeerrordiag: 
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | exitcode: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:02,447 | INFO     | exitmsg: OK
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | cpuconsumptiontime: 21479 s
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | nevents: 400
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | neventsw: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | pid: 2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | pgrp: 2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | corecount: 8
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | event service: False
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | sizes: {0: 2348684, 1: 2348883, 11: 2348883, 12: 2349173, 22: 2349201, 4303: 2375406, 4305: 2384460, 4334: 2384598}
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | --------------------------------------------------
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | 
[2025-10-11 02:14:52] 2025-10-11 06:14:02,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:14:52] 2025-10-11 06:14:02,514 | INFO     | job 6837706256 has completed (purged errors)
[2025-10-11 02:14:52] 2025-10-11 06:14:02,516 | INFO     | overall cleanup function is called
[2025-10-11 02:14:52] 2025-10-11 06:14:03,524 | INFO     | --- collectZombieJob: --- 10, [2299324]
[2025-10-11 02:14:52] 2025-10-11 06:14:03,524 | INFO     | zombie collector waiting for pid 2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:03,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:14:52] 2025-10-11 06:14:03,524 | INFO     | collected zombie processes
[2025-10-11 02:14:52] 2025-10-11 06:14:03,524 | INFO     | will attempt to kill all subprocesses of pid=2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:05,041 | INFO     | process IDs to be killed: [2299324] (in reverse order)
[2025-10-11 02:14:52] 2025-10-11 06:14:05,341 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:14:52] 2025-10-11 06:14:05,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:14:52] 2025-10-11 06:14:05,396 | INFO     | did not find any defunct processes belonging to 2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:05,466 | INFO     | did not find any defunct processes belonging to 2299324
[2025-10-11 02:14:52] 2025-10-11 06:14:05,466 | INFO     | ready for new job
[2025-10-11 02:14:52] 2025-10-11 06:14:05,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:14:52] 2025-10-11 06:14:05,467 | INFO     | ***************************************
[2025-10-11 02:14:52] 2025-10-11 06:14:05,468 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:14:52] 2025-10-11 06:14:05,468 | INFO     | ***************************************
[2025-10-11 02:14:52] 2025-10-11 06:14:05,468 | INFO     | 
[2025-10-11 02:14:52] 2025-10-11 06:14:05,495 | INFO     | architecture information:
[2025-10-11 02:14:52] 2025-10-11 06:14:05,495 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:14:52] 2025-10-11 06:14:05,527 | INFO     | cat /etc/os-release:
[2025-10-11 02:14:52] NAME="CentOS Linux"
[2025-10-11 02:14:52] VERSION="7 (Core)"
[2025-10-11 02:14:52] ID="centos"
[2025-10-11 02:14:52] ID_LIKE="rhel fedora"
[2025-10-11 02:14:52] VERSION_ID="7"
[2025-10-11 02:14:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:14:52] ANSI_COLOR="0;31"
[2025-10-11 02:14:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:14:52] HOME_URL="https://www.centos.org/"
[2025-10-11 02:14:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:14:52] 
[2025-10-11 02:14:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:14:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:14:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:14:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:14:52] 
[2025-10-11 02:14:52] 2025-10-11 06:14:05,527 | INFO     | ***************************************
[2025-10-11 02:14:52] 2025-10-11 06:14:06,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 02:14:52] 2025-10-11 06:14:06,078 | INFO     | sufficient remaining disk space (166764478464 B)
[2025-10-11 02:14:52] 2025-10-11 06:14:06,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:14:52] 2025-10-11 06:14:06,078 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:14:52] 2025-10-11 06:14:06,079 | INFO     | update_server=False
[2025-10-11 02:14:52] 2025-10-11 06:14:06,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:14:52] 2025-10-11 06:14:06,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:14:52] 2025-10-11 06:14:06,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:14:52] 2025-10-11 06:14:06,195 | INFO     | all data control threads have been joined
[2025-10-11 02:14:52] 2025-10-11 06:14:06,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 02:14:52] 2025-10-11 06:14:06,239 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 02:14:52] 2025-10-11 06:14:06,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:14:52] 2025-10-11 06:14:06,239 | INFO     | will abort loop
[2025-10-11 02:14:52] 2025-10-11 06:14:06,674 | INFO     | all payload control threads have been joined
[2025-10-11 02:14:52] 2025-10-11 06:14:06,878 | INFO     | all job control threads have been joined
[2025-10-11 02:14:52] 2025-10-11 06:14:07,085 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,243 | INFO     | [data] control thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,245 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:14:52] 2025-10-11 06:14:07,312 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,357 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,455 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,567 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,679 | INFO     | [payload] control thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:07,884 | INFO     | [job] control thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,026 | INFO     | [job] validate thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,030 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,086 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,295 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:08,335 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:10,090 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:14:52] 2025-10-11 06:14:22,123 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:14:52] 2025-10-11 06:14:23,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256970090304)>', '<ExcThread(monitor, started 140256602986240)>']
[2025-10-11 02:14:52] 2025-10-11 06:14:28,564 | INFO     | all workflow threads have been joined
[2025-10-11 02:14:52] 2025-10-11 06:14:28,564 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:14:52] 2025-10-11 06:14:28,564 | INFO     | traces error code: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:28,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:14:52] 2025-10-11 06:14:36,025 | INFO     | PID=2276311 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 02:14:52] 2025-10-11 06:14:36,028 | INFO     | .. there are 71 such processes running
[2025-10-11 02:14:52] 2025-10-11 06:14:36,029 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:14:52] 2025-10-11 06:14:36,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:14:52] 2025-10-11 06:14:36,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:14:52] 2025-10-11 06:14:36,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:14:52] 2025-10-11 06:14:36,029 | INFO     | [monitor] control thread has ended
[2025-10-11 02:14:52] 2025-10-11 06:14:36,167 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:14:52] 2025-10-11 06:14:36,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:14:52] 2025-10-11 06:14:36,199 [wrapper] pilotpid: 2276311
[2025-10-11 02:14:52] 2025-10-11 06:14:36,215 [wrapper] Pilot exit status: 0
[2025-10-11 02:14:52] 2025-10-11 06:14:36,313 [wrapper] pandaids: 6837706256
[2025-10-11 02:14:52] 2025-10-11 06:14:36,654 [wrapper] cleanup supervisor_pilot 2835205 2276312
[2025-10-11 02:14:52] 2025-10-11 06:14:36,691 [wrapper] Test setup, not cleaning
[2025-10-11 02:14:52] 2025-10-11 06:14:36,732 [wrapper] apfmon messages muted
[2025-10-11 02:14:52] 2025-10-11 06:14:36,775 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:14:52] 2025-10-11 06:14:36,816 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:14:52]  *** Error codes and diagnostics ***
[2025-10-11 02:14:52]     "exeErrorCode": 0,
[2025-10-11 02:14:52]     "exeErrorDiag": "",
[2025-10-11 02:14:52]     "pilotErrorCode": 0,
[2025-10-11 02:14:52]     "pilotErrorDiag": "",
[2025-10-11 02:14:52]  *** Listing of results directory ***
[2025-10-11 02:14:52] total 407248
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 13:48 pilot3.tar.gz
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 14:02 queuedata.json
[2025-10-11 02:14:52] -rwx------. 1 boincer umatlas     36292 Oct 10 14:02 runpilot2-wrapper.sh
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:14:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 01:00 run_atlas
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 01:00 job.xml
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas 223567835 Oct 11 01:00 EVNT.46676267._001729.pool.root.1
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 01:00 start_atlas.sh
[2025-10-11 02:14:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 01:00 shared
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 01:00 input.tar.gz
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 01:00 boinc_lockfile
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 01:00 pandaJob.out
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas    975517 Oct 11 01:01 agis_schedconf.cvmfs.json
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 01:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:14:52] drwx------. 5 boincer umatlas      4096 Oct 11 01:01 pilot3
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 02:09 init_data.xml
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas 187752621 Oct 11 02:12 HITS.46676269._042688.pool.root.1
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas       529 Oct 11 02:13 boinc_task_state.xml
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas      1034 Oct 11 02:13 memory_monitor_summary.json
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas    306244 Oct 11 02:13 log.46676269._042688.job.log.tgz.1
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas      7773 Oct 11 02:14 heartbeat.json
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas        95 Oct 11 02:14 pilot_heartbeat.json
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas       823 Oct 11 02:14 pilotlog.txt
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas    596581 Oct 11 02:14 log.46676269._042688.job.log.1
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas       357 Oct 11 02:14 output.list
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 02:14 runtime_log
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas    921600 Oct 11 02:14 result.tar.gz
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas       651 Oct 11 02:14 sW2NDmxcWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG3dNDmMiWQSm.diag
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 02:14 runtime_log.err
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas        27 Oct 11 02:14 wrapper_checkpoint.txt
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 02:14 boinc_mmap_file
[2025-10-11 02:14:52] -rw-r--r--. 1 boincer umatlas     22306 Oct 11 02:14 stderr.txt
[2025-10-11 02:14:52] HITS file was successfully produced:
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas 187752621 Oct 11 02:12 shared/HITS.pool.root.1
[2025-10-11 02:14:52]  *** Contents of shared directory: ***
[2025-10-11 02:14:52] total 403164
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas 223567835 Oct 11 01:00 ATLAS.root_0
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 01:00 start_atlas.sh
[2025-10-11 02:14:52] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 01:00 input.tar.gz
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas 187752621 Oct 11 02:12 HITS.pool.root.1
[2025-10-11 02:14:52] -rw-------. 1 boincer umatlas    921600 Oct 11 02:14 result.tar.gz
02:14:54 (2268627): run_atlas exited; CPU time 21661.260653
02:14:54 (2268627): called boinc_finish(0)

</stderr_txt>
]]>

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