Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:41:42 (477196): wrapper (7.7.26015): starting
22:41:42 (477196): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 22:41:42] Arguments: --nthreads 3
[2025-10-12 22:41:42] Threads: 3
[2025-10-12 22:41:42] Checking for CVMFS
[2025-10-12 22:42:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:42:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:42:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:42:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:42:32] 2.11.5.0 477415 0 30832 151621 3 1 13534639 15728640 0 130560 0 0 0.000 1293 46 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 22:42:32] CVMFS is ok
[2025-10-12 22:42:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:42:32] Checking for apptainer binary...
[2025-10-12 22:42:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:42:32] Running /usr/bin/apptainer --version
[2025-10-12 22:42:32] apptainer version 1.3.4-1.el9
[2025-10-12 22:42:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:42:32] testio003
[2025-10-12 22:42:32] apptainer works
[2025-10-12 22:42:32] Set ATHENA_PROC_NUMBER=3
[2025-10-12 22:42:32] Set ATHENA_CORE_NUMBER=3
[2025-10-12 22:42:32] Starting ATLAS job with PandaID=6837785779
[2025-10-12 22:42:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:39:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:39:18] 2025-10-12 15:38:18,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:39:18] 2025-10-12 15:38:18,118 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:39:18] 2025-10-12 15:38:18,118 | INFO     | sum of square deviations: 424057246.91891795
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | sum of deviations: 1577534739.5135186
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | mean x: 1760280019.0270271
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | mean y: 2351203.4954954954
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | -- intersect: -6546063901.924484
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | intersect: -6546063901.924484
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | chi2: 2.0865612519563492
[2025-10-13 00:39:18] 2025-10-12 15:38:18,119 | INFO     | sum of square deviations: 369294344.4150944
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | sum of deviations: 1807783719.2075477
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | mean x: 1760279866.528302
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | mean y: 2351845.2641509436
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | -- intersect: -8614637101.584805
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | intersect: -8614637101.584805
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | chi2: 2.089873795177067
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | current chi2=2.089873795177067 (change=-0.1587560977475318 %)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | right removable region: 105
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | sum of square deviations: 369292514.4150944
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | sum of deviations: -18023426168.415104
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | mean x: 1760280171.528302
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | mean y: 2405066.4716981133
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | -- intersect: 85913379345.26323
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | intersect: 85913379345.26323
[2025-10-13 00:39:18] 2025-10-12 15:38:18,120 | INFO     | chi2: 0.215529379039975
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | current chi2=0.215529379039975 (change=89.67059419713198 %)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | sum of square deviations: 319458106.9108916
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | sum of deviations: -13555979590.15842
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | mean x: 1760280324.029703
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | mean y: 2391338.386138614
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | -- intersect: 74698646118.8609
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | intersect: 74698646118.8609
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | chi2: 0.19997674221227418
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | current chi2=0.19997674221227418 (change=7.216017091023216 %)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | left removable region: 20
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | sum of square deviations: 190413094.89411813
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | sum of deviations: -2679431673.329412
[2025-10-13 00:39:18] 2025-10-12 15:38:18,121 | INFO     | mean x: 1760280446.035294
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | mean y: 2354591.776470588
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | -- intersect: 24772453432.258507
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | intersect: 24772453432.258507
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | chi2: 0.0773866752240374
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | -- intersect: 24772453432.258507
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | current memory leak: -14.07 B/s (using 85 data points, chi2=0.08)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | could have reported an average CPU frequency of 3573 MHz (7 samples)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | ..............................
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . Timing measurements:
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . get job = 0 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . initial setup = 9 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . payload setup = 5 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . stage-in = 0 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,122 | INFO     | . payload execution = 6754 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,123 | INFO     | . stage-out = 0 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,123 | INFO     | . log creation = 0 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,123 | INFO     | sufficient remaining disk space (40269512704 B)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,123 | INFO     | ..............................
[2025-10-13 00:39:18] 2025-10-12 15:38:18,123 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,161 | INFO     | size of work directory /var/lib/boinc/slots/3/PanDA_Pilot-6837785779: 2922189 B (within 2537553920 B limit)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,161 | INFO     | pfn file=/var/lib/boinc/slots/3/PanDA_Pilot-6837785779/HITS.46676269._045336.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,161 | INFO     | total size of present files: 0 B (workdir size: 2922189 B)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,161 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/3/PanDA_Pilot-6837785779/HITS.46676269._045336.pool.root.1 since it does not exist
[2025-10-13 00:39:18] 2025-10-12 15:38:18,178 | INFO     | time since job start (6858s) is within the limit (172800.0s)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,199 | INFO     | number of running child processes to parent process 488011: 1
[2025-10-13 00:39:18] 2025-10-12 15:38:18,199 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:39:18] 2025-10-12 15:38:18,199 | INFO     | aborting job monitoring since job object (job id=6837785779) has expired
[2025-10-13 00:39:18] 2025-10-12 15:38:18,518 | INFO     | 
[2025-10-13 00:39:18] 2025-10-12 15:38:18,518 | INFO     | job summary report
[2025-10-13 00:39:18] 2025-10-12 15:38:18,518 | INFO     | --------------------------------------------------
[2025-10-13 00:39:18] 2025-10-12 15:38:18,518 | INFO     | PanDA job id: 6837785779
[2025-10-13 00:39:18] 2025-10-12 15:38:18,518 | INFO     | task id: 46676269
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | errors: (none)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | pilot state: finished 
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | transexitcode: 0
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | exeerrorcode: 0
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | exeerrordiag: 
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | exitcode: 0
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | exitmsg: OK
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | cpuconsumptiontime: 19099 s
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | nevents: 400
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | neventsw: 0
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | pid: 488011
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | pgrp: 488011
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | corecount: 3
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | event service: False
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6762: 2376321, 6763: 2385375, 6843: 2385513}
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | --------------------------------------------------
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | 
[2025-10-13 00:39:18] 2025-10-12 15:38:18,519 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 00:39:18] 2025-10-12 15:38:18,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | job 6837785779 has completed (purged errors)
[2025-10-13 00:39:18] 2025-10-12 15:38:18,530 | INFO     | overall cleanup function is called
[2025-10-13 00:39:18] 2025-10-12 15:38:19,536 | INFO     | --- collectZombieJob: --- 10, [488011]
[2025-10-13 00:39:18] 2025-10-12 15:38:19,536 | INFO     | zombie collector waiting for pid 488011
[2025-10-13 00:39:18] 2025-10-12 15:38:19,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:39:18] 2025-10-12 15:38:19,536 | INFO     | collected zombie processes
[2025-10-13 00:39:18] 2025-10-12 15:38:19,537 | INFO     | will attempt to kill all subprocesses of pid=488011
[2025-10-13 00:39:18] 2025-10-12 15:38:19,574 | INFO     | process IDs to be killed: [488011] (in reverse order)
[2025-10-13 00:39:18] 2025-10-12 15:38:19,595 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:39:18] 2025-10-12 15:38:19,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:39:18] 2025-10-12 15:38:19,597 | INFO     | did not find any defunct processes belonging to 488011
[2025-10-13 00:39:18] 2025-10-12 15:38:19,598 | INFO     | did not find any defunct processes belonging to 488011
[2025-10-13 00:39:18] 2025-10-12 15:38:19,598 | INFO     | ready for new job
[2025-10-13 00:39:18] 2025-10-12 15:38:19,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:39:18] 2025-10-12 15:38:19,599 | INFO     | ***************************************
[2025-10-13 00:39:18] 2025-10-12 15:38:19,599 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:39:18] 2025-10-12 15:38:19,599 | INFO     | ***************************************
[2025-10-13 00:39:18] 2025-10-12 15:38:19,599 | INFO     | 
[2025-10-13 00:39:18] 2025-10-12 15:38:19,610 | INFO     | architecture information:
[2025-10-13 00:39:18] 2025-10-12 15:38:19,611 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:39:18] 2025-10-12 15:38:19,619 | INFO     | cat /etc/os-release:
[2025-10-13 00:39:18] NAME="CentOS Linux"
[2025-10-13 00:39:18] VERSION="7 (Core)"
[2025-10-13 00:39:18] ID="centos"
[2025-10-13 00:39:18] ID_LIKE="rhel fedora"
[2025-10-13 00:39:18] VERSION_ID="7"
[2025-10-13 00:39:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:39:18] ANSI_COLOR="0;31"
[2025-10-13 00:39:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:39:18] HOME_URL="https://www.centos.org/"
[2025-10-13 00:39:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:39:18] 
[2025-10-13 00:39:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:39:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:39:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:39:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:39:18] 
[2025-10-13 00:39:18] 2025-10-12 15:38:19,619 | INFO     | ***************************************
[2025-10-13 00:39:18] 2025-10-12 15:38:20,121 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 00:39:18] 2025-10-12 15:38:20,130 | INFO     | sufficient remaining disk space (40273707008 B)
[2025-10-13 00:39:18] 2025-10-12 15:38:20,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:39:18] 2025-10-12 15:38:20,130 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:39:18] 2025-10-12 15:38:20,130 | INFO     | update_server=False
[2025-10-13 00:39:18] 2025-10-12 15:38:20,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | INFO     | aborting loop
[2025-10-13 00:39:18] 2025-10-12 15:38:20,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:39:18] 2025-10-12 15:38:20,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:39:18] 2025-10-12 15:38:20,303 | INFO     | all data control threads have been joined
[2025-10-13 00:39:18] 2025-10-12 15:38:21,129 | INFO     | all job control threads have been joined
[2025-10-13 00:39:18] 2025-10-12 15:38:21,135 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:21,136 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:21,136 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:21,227 | INFO     | all payload control threads have been joined
[2025-10-13 00:39:18] 2025-10-12 15:38:21,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:39:18] 2025-10-12 15:38:21,309 | INFO     | [data] control thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:21,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:39:18] 2025-10-12 15:38:21,428 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:21,537 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,060 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,134 | INFO     | [job] control thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,232 | INFO     | [payload] control thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,290 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,571 | INFO     | [job] validate thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,571 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:22,584 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:23,425 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:25,290 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:38:30,313 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:39:18] 2025-10-12 15:38:31,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:39:18] 2025-10-12 15:39:11,286 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:39:18] 2025-10-12 15:39:13,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717578590016)>', '<ExcThread(monitor, started 140716936255232)>']
[2025-10-13 00:39:18] 2025-10-12 15:39:13,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:39:18] 2025-10-12 15:39:13,389 | INFO     | [monitor] control thread has ended
[2025-10-13 00:39:18] 2025-10-12 15:39:18,280 | INFO     | all workflow threads have been joined
[2025-10-13 00:39:18] 2025-10-12 15:39:18,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:39:18] 2025-10-12 15:39:18,281 | INFO     | traces error code: 0
[2025-10-13 00:39:18] 2025-10-12 15:39:18,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:39:18] 2025-10-12 15:39:18,341 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:39:18] 2025-10-12 15:39:18,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:39:18] 2025-10-12 15:39:18,344 [wrapper] pilotpid: 481484
[2025-10-13 00:39:18] 2025-10-12 15:39:18,346 [wrapper] Pilot exit status: 0
[2025-10-13 00:39:18] 2025-10-12 15:39:18,352 [wrapper] pandaids: 6837785779
[2025-10-13 00:39:18] 2025-10-12 15:39:18,366 [wrapper] cleanup supervisor_pilot  502225 481485
[2025-10-13 00:39:18] 2025-10-12 15:39:18,368 [wrapper] Test setup, not cleaning
[2025-10-13 00:39:18] 2025-10-12 15:39:18,370 [wrapper] apfmon messages muted
[2025-10-13 00:39:18] 2025-10-12 15:39:18,371 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:39:18] 2025-10-12 15:39:18,373 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:39:18]  *** Error codes and diagnostics ***
[2025-10-13 00:39:18]     "exeErrorCode": 0,
[2025-10-13 00:39:18]     "exeErrorDiag": "",
[2025-10-13 00:39:18]     "pilotErrorCode": 0,
[2025-10-13 00:39:18]     "pilotErrorDiag": "",
[2025-10-13 00:39:18]  *** Listing of results directory ***
[2025-10-13 00:39:18] total 409512
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc    557409 Oct 11 05:48 pilot3.tar.gz
[2025-10-13 00:39:18] -rwx------. 1 boinc boinc     36292 Oct 11 06:10 runpilot2-wrapper.sh
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc      5112 Oct 11 06:10 queuedata.json
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc       100 Oct 12 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:39:18] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 22:41 run_atlas
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc       105 Oct 12 22:41 job.xml
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc      9291 Oct 12 22:41 init_data.xml
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc 219207248 Oct 12 22:41 EVNT.46676267._001833.pool.root.1
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:41 start_atlas.sh
[2025-10-13 00:39:18] drwxrwx--x. 2 boinc boinc        68 Oct 12 22:41 shared
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc    569676 Oct 12 22:41 input.tar.gz
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc         0 Oct 12 22:41 boinc_lockfile
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc      2550 Oct 12 22:42 pandaJob.out
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc    975528 Oct 12 22:43 agis_schedconf.cvmfs.json
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc   1560580 Oct 12 22:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:39:18] drwx------. 5 boinc boinc      4096 Oct 12 22:44 pilot3
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc       529 Oct 13 00:36 boinc_task_state.xml
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc 193734799 Oct 13 00:36 HITS.46676269._045336.pool.root.1
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc      1023 Oct 13 00:36 memory_monitor_summary.json
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc    290185 Oct 13 00:36 log.46676269._045336.job.log.tgz.1
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc        95 Oct 13 00:37 pilot_heartbeat.json
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc      7759 Oct 13 00:38 heartbeat.json
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:39 boinc_mmap_file
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc        27 Oct 13 00:39 wrapper_checkpoint.txt
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc      4624 Oct 13 00:39 pilotlog.txt
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc    965539 Oct 13 00:39 log.46676269._045336.job.log.1
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc       357 Oct 13 00:39 output.list
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:39 runtime_log
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc   1269760 Oct 13 00:39 result.tar.gz
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc      8661 Oct 13 00:39 runtime_log.err
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc       643 Oct 13 00:39 0CHKDmXYZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpbQMDmwkO7zm.diag
[2025-10-13 00:39:18] -rw-r--r--. 1 boinc boinc     20976 Oct 13 00:39 stderr.txt
[2025-10-13 00:39:18] HITS file was successfully produced:
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc 193734799 Oct 13 00:36 shared/HITS.pool.root.1
[2025-10-13 00:39:18]  *** Contents of shared directory: ***
[2025-10-13 00:39:18] total 405084
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc 219207248 Oct 12 22:41 ATLAS.root_0
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:41 start_atlas.sh
[2025-10-13 00:39:18] -rw-r--r--. 2 boinc boinc    569676 Oct 12 22:41 input.tar.gz
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc 193734799 Oct 13 00:36 HITS.pool.root.1
[2025-10-13 00:39:18] -rw-------. 1 boinc boinc   1269760 Oct 13 00:39 result.tar.gz
00:39:19 (477196): run_atlas exited; CPU time 19129.400936
00:39:19 (477196): called boinc_finish(0)

</stderr_txt>
]]>

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