Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:30:55 (31653): wrapper (7.7.26015): starting
00:30:55 (31653): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:30:55] Arguments: --nthreads 12
[2025-10-11 00:30:55] Threads: 12
[2025-10-11 00:30:55] Checking for CVMFS
[2025-10-11 00:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:30:56] 2.11.2.0 3009 6231 86160 151572 3 58 16436853 20275200 1 130560 0 5451965 99.992 208796 45429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:30:56] CVMFS is ok
[2025-10-11 00:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:30:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:30:56] Further information can be found at the LHC@home message board.
[2025-10-11 00:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:30:56] Checking for apptainer binary...
[2025-10-11 00:30:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:30:56] Running /usr/bin/apptainer --version
[2025-10-11 00:30:56] apptainer version 1.3.2-1.el7
[2025-10-11 00:30:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:30:57] c-115-42.aglt2.org
[2025-10-11 00:30:57] apptainer works
[2025-10-11 00:30:57] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:30:57] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:30:57] Starting ATLAS job with PandaID=6837705856
[2025-10-11 00:30:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 01:37:23]  *** The last 200 lines of the pilot log: ***
[2025-10-11 01:37:23]  storage_token=
[2025-10-11 01:37:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837705856/log.46676269._042662.job.log.tgz.1
[2025-10-11 01:37:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f6/log.46676269._042662.job.log.tgz.1
[2025-10-11 01:37:23]  workdir=None
[2025-10-11 01:37:23] ]
[2025-10-11 01:37:23] 2025-10-11 05:36:11,259 | INFO     | transferring file log.46676269._042662.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837705856/log.46676269._042662.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 01:37:23] 2025-10-11 05:36:11,259 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837705856/log.46676269._042662.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._042662.job
[2025-10-11 01:37:23] 2025-10-11 05:36:11,281 | INFO     | adding to output.list: log.46676269._042662.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f6/log.46676269._042662.job.log.tg
[2025-10-11 01:37:23] 2025-10-11 05:36:11,282 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 01:37:23] 2025-10-11 05:36:11,282 | INFO     | summary of transferred files:
[2025-10-11 01:37:23] 2025-10-11 05:36:11,282 | INFO     |  -- lfn=log.46676269._042662.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 01:37:23] 2025-10-11 05:36:11,283 | INFO     | stage-out finished correctly
[2025-10-11 01:37:23] 2025-10-11 05:36:11,864 | INFO     | monitor loop #295: job 0:6837705856 is in state 'finished'
[2025-10-11 01:37:23] 2025-10-11 05:36:11,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:37:23] 2025-10-11 05:36:12,180 | INFO     | PID=3061 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 01:37:23] 2025-10-11 05:36:13,180 | INFO     | time since job start (3901s) is within the limit (172800.0s)
[2025-10-11 01:37:23] 2025-10-11 05:36:14,367 | INFO     | monitor loop #296: job 0:6837705856 is in state 'finished'
[2025-10-11 01:37:23] 2025-10-11 05:36:14,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:37:23] 2025-10-11 05:36:14,832 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 01:37:23] 2025-10-11 05:36:15,186 | INFO     | time since job start (3903s) is within the limit (172800.0s)
[2025-10-11 01:37:23] 2025-10-11 05:36:16,763 | INFO     | job 6837705856 has state=finished
[2025-10-11 01:37:23] 2025-10-11 05:36:16,763 | INFO     | preparing for final server update for job 6837705856 in state='finished'
[2025-10-11 01:37:23] 2025-10-11 05:36:16,764 | INFO     | this job has now completed (state=finished)
[2025-10-11 01:37:23] 2025-10-11 05:36:16,764 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 01:37:23] 2025-10-11 05:36:16,764 | INFO     | log transfer has been attempted: DONE
[2025-10-11 01:37:23] 2025-10-11 05:36:16,764 | INFO     | job 6837705856 has finished - writing final server update
[2025-10-11 01:37:23] 2025-10-11 05:36:16,765 | INFO     | total number of processed events: 400 (read)
[2025-10-11 01:37:23] 2025-10-11 05:36:16,767 | INFO     | executing command: lscpu
[2025-10-11 01:37:23] 2025-10-11 05:36:16,797 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 01:37:23] 2025-10-11 05:36:16,871 | INFO     | monitor loop #297: job 0:6837705856 is in state 'finished'
[2025-10-11 01:37:23] 2025-10-11 05:36:16,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:37:23] 2025-10-11 05:36:17,192 | INFO     | time since job start (3905s) is within the limit (172800.0s)
[2025-10-11 01:37:23] 2025-10-11 05:36:19,197 | INFO     | time since job start (3907s) is within the limit (172800.0s)
[2025-10-11 01:37:23] 2025-10-11 05:36:19,374 | INFO     | monitor loop #298: job 0:6837705856 is in state 'finished'
[2025-10-11 01:37:23] 2025-10-11 05:36:19,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,202 | INFO     | time since job start (3909s) is within the limit (172800.0s)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,226 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 01:37:23] 2025-10-11 05:36:21,230 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-10-11 01:37:23] 2025-10-11 05:36:21,233 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837705856/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,235 | INFO     | extracted standard info from prmon json
[2025-10-11 01:37:23] 2025-10-11 05:36:21,235 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 01:37:23] 2025-10-11 05:36:21,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:37:23] 2025-10-11 05:36:21,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:37:23] 2025-10-11 05:36:21,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:37:23] 2025-10-11 05:36:21,237 | INFO     | fitting pss+swap vs Time
[2025-10-11 01:37:23] 2025-10-11 05:36:21,237 | INFO     | sum of square deviations: 57407588.0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | sum of deviations: -5673102479.999998
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | mean x: 1760159113.0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | mean y: 2884469.3157894737
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | -- intersect: 173944402952.11456
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | intersect: 173944402952.11456
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | chi2: 0.05260743323915681
[2025-10-11 01:37:23] 2025-10-11 05:36:21,238 | INFO     | -- intersect: 173944402952.11456
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | current memory leak: -98.82 B/s (using 57 data points, chi2=0.05)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | could have reported an average CPU frequency of 2148 MHz (6 samples)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | ..............................
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | . Timing measurements:
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | . get job = 0 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | . initial setup = 2 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,239 | INFO     | . payload setup = 6 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,240 | INFO     | . stage-in = 0 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,240 | INFO     | . payload execution = 3872 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,240 | INFO     | . stage-out = 0 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,240 | INFO     | . log creation = 0 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,240 | INFO     | ..............................
[2025-10-11 01:37:23] 2025-10-11 05:36:21,313 | INFO     | 
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | job summary report
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | --------------------------------------------------
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | PanDA job id: 6837705856
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | task id: 46676269
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | errors: (none)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | pilot state: finished 
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | transexitcode: 0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,314 | INFO     | exeerrorcode: 0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | exeerrordiag: 
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | exitcode: 0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | exitmsg: OK
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | cpuconsumptiontime: 40917 s
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | nevents: 400
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | neventsw: 0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | pid: 9473
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | pgrp: 9473
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | corecount: 12
[2025-10-11 01:37:23] 2025-10-11 05:36:21,315 | INFO     | event service: False
[2025-10-11 01:37:23] 2025-10-11 05:36:21,316 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 3883: 2374959, 3884: 2383957, 3887: 2384141, 3894: 2384335}
[2025-10-11 01:37:23] 2025-10-11 05:36:21,316 | INFO     | --------------------------------------------------
[2025-10-11 01:37:23] 2025-10-11 05:36:21,316 | INFO     | 
[2025-10-11 01:37:23] 2025-10-11 05:36:21,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 01:37:23] 2025-10-11 05:36:21,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 01:37:23] 2025-10-11 05:36:21,344 | INFO     | job 6837705856 has completed (purged errors)
[2025-10-11 01:37:23] 2025-10-11 05:36:21,344 | INFO     | overall cleanup function is called
[2025-10-11 01:37:23] 2025-10-11 05:36:22,352 | INFO     | --- collectZombieJob: --- 10, [9473]
[2025-10-11 01:37:23] 2025-10-11 05:36:22,352 | INFO     | zombie collector waiting for pid 9473
[2025-10-11 01:37:23] 2025-10-11 05:36:22,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 01:37:23] 2025-10-11 05:36:22,352 | INFO     | collected zombie processes
[2025-10-11 01:37:23] 2025-10-11 05:36:22,353 | INFO     | will attempt to kill all subprocesses of pid=9473
[2025-10-11 01:37:23] 2025-10-11 05:36:22,441 | INFO     | process IDs to be killed: [9473] (in reverse order)
[2025-10-11 01:37:23] 2025-10-11 05:36:22,489 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 01:37:23] 2025-10-11 05:36:22,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 01:37:23] 2025-10-11 05:36:22,493 | INFO     | did not find any defunct processes belonging to 9473
[2025-10-11 01:37:23] 2025-10-11 05:36:22,496 | INFO     | did not find any defunct processes belonging to 9473
[2025-10-11 01:37:23] 2025-10-11 05:36:22,497 | INFO     | ready for new job
[2025-10-11 01:37:23] 2025-10-11 05:36:22,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 01:37:23] 2025-10-11 05:36:22,498 | INFO     | ***************************************
[2025-10-11 01:37:23] 2025-10-11 05:36:22,498 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 01:37:23] 2025-10-11 05:36:22,498 | INFO     | ***************************************
[2025-10-11 01:37:23] 2025-10-11 05:36:22,498 | INFO     | 
[2025-10-11 01:37:23] 2025-10-11 05:36:22,499 | INFO     | architecture information:
[2025-10-11 01:37:23] 2025-10-11 05:36:22,499 | INFO     | executing command: cat /etc/os-release
[2025-10-11 01:37:23] 2025-10-11 05:36:22,516 | INFO     | cat /etc/os-release:
[2025-10-11 01:37:23] NAME="CentOS Linux"
[2025-10-11 01:37:23] VERSION="7 (Core)"
[2025-10-11 01:37:23] ID="centos"
[2025-10-11 01:37:23] ID_LIKE="rhel fedora"
[2025-10-11 01:37:23] VERSION_ID="7"
[2025-10-11 01:37:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 01:37:23] ANSI_COLOR="0;31"
[2025-10-11 01:37:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 01:37:23] HOME_URL="https://www.centos.org/"
[2025-10-11 01:37:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 01:37:23] 
[2025-10-11 01:37:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 01:37:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 01:37:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 01:37:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 01:37:23] 
[2025-10-11 01:37:23] 2025-10-11 05:36:22,516 | INFO     | ***************************************
[2025-10-11 01:37:23] 2025-10-11 05:36:23,019 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 01:37:23] 2025-10-11 05:36:23,037 | INFO     | sufficient remaining disk space (18591252480 B)
[2025-10-11 01:37:23] 2025-10-11 05:36:23,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 01:37:23] 2025-10-11 05:36:23,038 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 01:37:23] 2025-10-11 05:36:23,038 | INFO     | update_server=False
[2025-10-11 01:37:23] 2025-10-11 05:36:23,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 01:37:23] 2025-10-11 05:36:23,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:37:23] 2025-10-11 05:36:23,039 | INFO     | aborting loop
[2025-10-11 01:37:23] 2025-10-11 05:36:23,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:37:23] 2025-10-11 05:36:23,039 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 01:37:23] 2025-10-11 05:36:23,040 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 01:37:23] 2025-10-11 05:36:23,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 01:37:23] 2025-10-11 05:36:23,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 01:37:23] 2025-10-11 05:36:23,092 | INFO     | all payload control threads have been joined
[2025-10-11 01:37:23] 2025-10-11 05:36:23,244 | INFO     | all data control threads have been joined
[2025-10-11 01:37:23] 2025-10-11 05:36:24,044 | INFO     | [job] retrieve thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,044 | INFO     | [job] job monitor thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,045 | INFO     | [job] queue monitor thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,094 | INFO     | [payload] control thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,187 | INFO     | all job control threads have been joined
[2025-10-11 01:37:23] 2025-10-11 05:36:24,188 | INFO     | [payload] validate_post thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,250 | INFO     | [data] control thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 01:37:23] 2025-10-11 05:36:24,477 | INFO     | [payload] failed_post thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,793 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,803 | INFO     | [job] validate thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,822 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:24,963 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:25,193 | INFO     | [job] control thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:25,229 | INFO     | [data] copytool_in thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:25,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 01:37:23] 2025-10-11 05:36:26,381 | INFO     | [data] copytool_out thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:29,421 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:36:33,272 | INFO     | job.realtimelogging is not enabled
[2025-10-11 01:37:23] 2025-10-11 05:36:34,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 01:37:23] 2025-10-11 05:37:17,809 | INFO     | [monitor] cgroup control has ended
[2025-10-11 01:37:23] 2025-10-11 05:37:18,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444744984384)>', '<ExcThread(monitor, started 140444449089280)>']
[2025-10-11 01:37:23] 2025-10-11 05:37:19,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 01:37:23] 2025-10-11 05:37:19,309 | INFO     | [monitor] control thread has ended
[2025-10-11 01:37:23] 2025-10-11 05:37:23,396 | INFO     | all workflow threads have been joined
[2025-10-11 01:37:23] 2025-10-11 05:37:23,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 01:37:23] 2025-10-11 05:37:23,396 | INFO     | traces error code: 0
[2025-10-11 01:37:23] 2025-10-11 05:37:23,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 01:37:23] 2025-10-11 05:37:23,480 [wrapper] ==== pilot stdout END ====
[2025-10-11 01:37:23] 2025-10-11 05:37:23,484 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 01:37:23] 2025-10-11 05:37:23,488 [wrapper] pilotpid: 3061
[2025-10-11 01:37:23] 2025-10-11 05:37:23,492 [wrapper] Pilot exit status: 0
[2025-10-11 01:37:23] 2025-10-11 05:37:23,507 [wrapper] pandaids: 6837705856
[2025-10-11 01:37:23] 2025-10-11 05:37:23,554 [wrapper] cleanup supervisor_pilot  4975 3062
[2025-10-11 01:37:23] 2025-10-11 05:37:23,558 [wrapper] Test setup, not cleaning
[2025-10-11 01:37:23] 2025-10-11 05:37:23,562 [wrapper] apfmon messages muted
[2025-10-11 01:37:23] 2025-10-11 05:37:23,565 [wrapper] ==== wrapper stdout END ====
[2025-10-11 01:37:23] 2025-10-11 05:37:23,569 [wrapper] ==== wrapper stderr END ====
[2025-10-11 01:37:23]  *** Error codes and diagnostics ***
[2025-10-11 01:37:23]     "exeErrorCode": 0,
[2025-10-11 01:37:23]     "exeErrorDiag": "",
[2025-10-11 01:37:23]     "pilotErrorCode": 0,
[2025-10-11 01:37:23]     "pilotErrorDiag": "",
[2025-10-11 01:37:23]  *** Listing of results directory ***
[2025-10-11 01:37:23] total 407192
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 13:48 pilot3.tar.gz
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 14:00 queuedata.json
[2025-10-11 01:37:23] -rwx------ 1 boincer umatlas     36292 Oct 10 14:02 runpilot2-wrapper.sh
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas       100 Oct 11 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 01:37:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 00:30 run_atlas
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas       105 Oct 11 00:30 job.xml
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas 221175971 Oct 11 00:30 EVNT.46676267._001728.pool.root.1
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 00:30 start_atlas.sh
[2025-10-11 01:37:23] drwxrwx--x 2 boincer umatlas      4096 Oct 11 00:30 shared
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 00:30 input.tar.gz
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas         0 Oct 11 00:30 boinc_lockfile
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 00:30 pandaJob.out
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas    975517 Oct 11 00:31 agis_schedconf.cvmfs.json
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas   1560580 Oct 11 00:31 agis_ddmendpoints.agis.ALL.json
[2025-10-11 01:37:23] drwx------ 5 boincer umatlas      4096 Oct 11 00:31 pilot3
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas 190004382 Oct 11 01:35 HITS.46676269._042662.pool.root.1
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas        95 Oct 11 01:36 pilot_heartbeat.json
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas       529 Oct 11 01:36 boinc_task_state.xml
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas      1049 Oct 11 01:36 memory_monitor_summary.json
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas    365137 Oct 11 01:36 log.46676269._042662.job.log.tgz.1
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas      7851 Oct 11 01:36 heartbeat.json
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas      5954 Oct 11 01:37 init_data.xml
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 01:37 boinc_mmap_file
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas        27 Oct 11 01:37 wrapper_checkpoint.txt
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas      4624 Oct 11 01:37 pilotlog.txt
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas    576936 Oct 11 01:37 log.46676269._042662.job.log.1
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas       357 Oct 11 01:37 output.list
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas       620 Oct 11 01:37 runtime_log
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas    962560 Oct 11 01:37 result.tar.gz
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas       659 Oct 11 01:37 xQNMDmkcWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm12dNDmtf77am.diag
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 01:37 runtime_log.err
[2025-10-11 01:37:23] -rw-r--r-- 1 boincer umatlas     22178 Oct 11 01:37 stderr.txt
[2025-10-11 01:37:23] HITS file was successfully produced:
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas 190004382 Oct 11 01:35 shared/HITS.pool.root.1
[2025-10-11 01:37:23]  *** Contents of shared directory: ***
[2025-10-11 01:37:23] total 403064
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas 221175971 Oct 11 00:30 ATLAS.root_0
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 00:30 start_atlas.sh
[2025-10-11 01:37:23] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 00:30 input.tar.gz
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas 190004382 Oct 11 01:35 HITS.pool.root.1
[2025-10-11 01:37:23] -rw------- 1 boincer umatlas    962560 Oct 11 01:37 result.tar.gz
01:37:25 (31653): run_atlas exited; CPU time 40911.532193
01:37:25 (31653): called boinc_finish(0)

</stderr_txt>
]]>

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