Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:47:17 (2061432): wrapper (7.7.26015): starting
00:47:17 (2061432): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:47:17] Arguments: --nthreads 12
[2025-10-11 00:47:17] Threads: 12
[2025-10-11 00:47:17] Checking for CVMFS
[2025-10-11 00:47:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:47:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:47:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:47:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:47:18] 2.12.7.0 2061225 0 26008 151572 3 3 4082212 4194304 1 130560 0 26 99.588 1291 1756 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2025-10-11 00:47:18] CVMFS is ok
[2025-10-11 00:47:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:47:18] Checking for apptainer binary...
[2025-10-11 00:47:18] apptainer is not installed, using version from CVMFS
[2025-10-11 00:47:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:47:18] Trebeth
[2025-10-11 00:47:18] apptainer works
[2025-10-11 00:47:18] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:47:18] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:47:18] Starting ATLAS job with PandaID=6837705129
[2025-10-11 00:47:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 01:29:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 01:29:43]  status=None
[2025-10-11 01:29:43]  status_code=0
[2025-10-11 01:29:43]  storage_token=
[2025-10-11 01:29:43]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837705129/log.46676269._042276.job.log.tgz.1
[2025-10-11 01:29:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/2a/log.46676269._042276.job.log.tgz.1
[2025-10-11 01:29:43]  workdir=None
[2025-10-11 01:29:43] ]
[2025-10-11 01:29:43] 2025-10-11 05:28:33,997 | INFO     | transferring file log.46676269._042276.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837705129/log.46676269._042276.job.log.tgz.1 to /var/lib/boinc
[2025-10-11 01:29:43] 2025-10-11 05:28:33,997 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837705129/log.46676269._042276.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-11 01:29:43] 2025-10-11 05:28:34,011 | INFO     | adding to output.list: log.46676269._042276.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/2a/log.46676269._042276.job.log.tg
[2025-10-11 01:29:43] 2025-10-11 05:28:34,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 01:29:43] 2025-10-11 05:28:34,012 | INFO     | summary of transferred files:
[2025-10-11 01:29:43] 2025-10-11 05:28:34,012 | INFO     |  -- lfn=log.46676269._042276.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 01:29:43] 2025-10-11 05:28:34,012 | INFO     | stage-out finished correctly
[2025-10-11 01:29:43] 2025-10-11 05:28:34,595 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 01:29:43] 2025-10-11 05:28:35,691 | INFO     | job 6837705129 has state=finished
[2025-10-11 01:29:43] 2025-10-11 05:28:35,692 | INFO     | preparing for final server update for job 6837705129 in state='finished'
[2025-10-11 01:29:43] 2025-10-11 05:28:35,692 | INFO     | this job has now completed (state=finished)
[2025-10-11 01:29:43] 2025-10-11 05:28:35,693 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 01:29:43] 2025-10-11 05:28:35,693 | INFO     | log transfer has been attempted: DONE
[2025-10-11 01:29:43] 2025-10-11 05:28:35,693 | INFO     | job 6837705129 has finished - writing final server update
[2025-10-11 01:29:43] 2025-10-11 05:28:35,693 | INFO     | total number of processed events: 400 (read)
[2025-10-11 01:29:43] 2025-10-11 05:28:35,696 | INFO     | executing command: lscpu
[2025-10-11 01:29:43] 2025-10-11 05:28:35,752 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 01:29:43] 2025-10-11 05:28:35,786 | INFO     | monitor loop #189: job 0:6837705129 is in state 'finished'
[2025-10-11 01:29:43] 2025-10-11 05:28:35,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:29:43] 2025-10-11 05:28:35,980 | INFO     | time since job start (2461s) is within the limit (172800.0s)
[2025-10-11 01:29:43] 2025-10-11 05:28:37,986 | INFO     | time since job start (2463s) is within the limit (172800.0s)
[2025-10-11 01:29:43] 2025-10-11 05:28:38,290 | INFO     | monitor loop #190: job 0:6837705129 is in state 'finished'
[2025-10-11 01:29:43] 2025-10-11 05:28:38,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:29:43] 2025-10-11 05:28:39,990 | INFO     | time since job start (2465s) is within the limit (172800.0s)
[2025-10-11 01:29:43] 2025-10-11 05:28:40,793 | INFO     | monitor loop #191: job 0:6837705129 is in state 'finished'
[2025-10-11 01:29:43] 2025-10-11 05:28:40,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 01:29:43] 2025-10-11 05:28:40,883 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 01:29:43] 2025-10-11 05:28:40,913 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 1249.705392857143
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837705129/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | INFO     | extracted standard info from prmon json
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:29:43] 2025-10-11 05:28:40,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | fitting pss+swap vs Time
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | sum of square deviations: 11133232.0
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | sum of deviations: -710963601.0
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | mean x: 1760159359.0
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | mean y: 2801465.303030303
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | -- intersect: 112405851739.3377
[2025-10-11 01:29:43] 2025-10-11 05:28:40,920 | INFO     | intersect: 112405851739.3377
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | chi2: 0.054880636320921175
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | -- intersect: 112405851739.3377
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | current memory leak: -63.86 B/s (using 33 data points, chi2=0.05)
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | could have reported an average CPU frequency of 1509 MHz (5 samples)
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | ..............................
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . Timing measurements:
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . get job = 0 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . initial setup = 2 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . payload setup = 6 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . stage-in = 0 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . payload execution = 2435 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . stage-out = 0 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | . log creation = 0 s
[2025-10-11 01:29:43] 2025-10-11 05:28:40,921 | INFO     | ..............................
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | 
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | job summary report
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | --------------------------------------------------
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | PanDA job id: 6837705129
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | task id: 46676269
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | errors: (none)
[2025-10-11 01:29:43] 2025-10-11 05:28:41,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | pilot state: finished 
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | transexitcode: 0
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | exeerrorcode: 0
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | exeerrordiag: 
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | exitcode: 0
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | exitmsg: OK
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | cpuconsumptiontime: 24255 s
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | nevents: 400
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | neventsw: 0
[2025-10-11 01:29:43] 2025-10-11 05:28:41,448 | INFO     | pid: 2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | pgrp: 2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | corecount: 12
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | event service: False
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | sizes: {0: 2348863, 4: 2349125, 11: 2349153, 2444: 2374313, 2445: 2383381, 2452: 2383551}
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | --------------------------------------------------
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | 
[2025-10-11 01:29:43] 2025-10-11 05:28:41,449 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-11 01:29:43] 2025-10-11 05:28:41,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 01:29:43] 2025-10-11 05:28:41,471 | INFO     | job 6837705129 has completed (purged errors)
[2025-10-11 01:29:43] 2025-10-11 05:28:41,472 | INFO     | overall cleanup function is called
[2025-10-11 01:29:43] 2025-10-11 05:28:42,480 | INFO     | --- collectZombieJob: --- 10, [2083946]
[2025-10-11 01:29:43] 2025-10-11 05:28:42,480 | INFO     | zombie collector waiting for pid 2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:42,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 01:29:43] 2025-10-11 05:28:42,481 | INFO     | collected zombie processes
[2025-10-11 01:29:43] 2025-10-11 05:28:42,481 | INFO     | will attempt to kill all subprocesses of pid=2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:42,599 | INFO     | process IDs to be killed: [2083946] (in reverse order)
[2025-10-11 01:29:43] 2025-10-11 05:28:42,655 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 01:29:43] 2025-10-11 05:28:42,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 01:29:43] 2025-10-11 05:28:42,660 | INFO     | did not find any defunct processes belonging to 2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:42,664 | INFO     | did not find any defunct processes belonging to 2083946
[2025-10-11 01:29:43] 2025-10-11 05:28:42,664 | INFO     | ready for new job
[2025-10-11 01:29:43] 2025-10-11 05:28:42,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 01:29:43] 2025-10-11 05:28:42,665 | INFO     | ***************************************
[2025-10-11 01:29:43] 2025-10-11 05:28:42,665 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 01:29:43] 2025-10-11 05:28:42,665 | INFO     | ***************************************
[2025-10-11 01:29:43] 2025-10-11 05:28:42,665 | INFO     | 
[2025-10-11 01:29:43] 2025-10-11 05:28:42,686 | INFO     | architecture information:
[2025-10-11 01:29:43] 2025-10-11 05:28:42,687 | INFO     | executing command: cat /etc/os-release
[2025-10-11 01:29:43] 2025-10-11 05:28:42,698 | INFO     | cat /etc/os-release:
[2025-10-11 01:29:43] NAME="CentOS Linux"
[2025-10-11 01:29:43] VERSION="7 (Core)"
[2025-10-11 01:29:43] ID="centos"
[2025-10-11 01:29:43] ID_LIKE="rhel fedora"
[2025-10-11 01:29:43] VERSION_ID="7"
[2025-10-11 01:29:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 01:29:43] ANSI_COLOR="0;31"
[2025-10-11 01:29:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 01:29:43] HOME_URL="https://www.centos.org/"
[2025-10-11 01:29:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 01:29:43] 
[2025-10-11 01:29:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 01:29:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 01:29:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 01:29:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 01:29:43] 
[2025-10-11 01:29:43] 2025-10-11 05:28:42,698 | INFO     | ***************************************
[2025-10-11 01:29:43] 2025-10-11 05:28:43,201 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-11 01:29:43] 2025-10-11 05:28:43,216 | INFO     | sufficient remaining disk space (401382309888 B)
[2025-10-11 01:29:43] 2025-10-11 05:28:43,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 01:29:43] 2025-10-11 05:28:43,216 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 01:29:43] 2025-10-11 05:28:43,216 | INFO     | update_server=False
[2025-10-11 01:29:43] 2025-10-11 05:28:43,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 01:29:43] 2025-10-11 05:28:43,221 | INFO     | all data control threads have been joined
[2025-10-11 01:29:43] 2025-10-11 05:28:43,297 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 01:29:43] 2025-10-11 05:28:43,297 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 01:29:43] 2025-10-11 05:28:43,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:29:43] 2025-10-11 05:28:43,297 | INFO     | will abort loop
[2025-10-11 01:29:43] 2025-10-11 05:28:43,517 | INFO     | all job control threads have been joined
[2025-10-11 01:29:43] 2025-10-11 05:28:44,222 | INFO     | [job] retrieve thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:44,226 | INFO     | [data] control thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:44,303 | INFO     | [job] job monitor thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:44,522 | INFO     | [job] control thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:44,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 01:29:43] 2025-10-11 05:28:44,712 | INFO     | all payload control threads have been joined
[2025-10-11 01:29:43] 2025-10-11 05:28:44,804 | INFO     | [data] copytool_in thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:44,918 | INFO     | [payload] failed_post thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,055 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 01:29:43] 2025-10-11 05:28:45,488 | INFO     | [job] validate thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,697 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,717 | INFO     | [payload] control thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,794 | INFO     | [payload] validate_post thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:45,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:29:43] 2025-10-11 05:28:46,580 | INFO     | [data] copytool_out thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:46,979 | INFO     | [job] queue monitor thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:49,156 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:28:53,541 | INFO     | job.realtimelogging is not enabled
[2025-10-11 01:29:43] 2025-10-11 05:28:54,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 01:29:43] 2025-10-11 05:29:13,260 | INFO     | PID=2070114 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 01:29:43] 2025-10-11 05:29:13,260 | INFO     | .. there are 2 such processes running
[2025-10-11 01:29:43] 2025-10-11 05:29:13,261 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 01:29:43] 2025-10-11 05:29:13,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 01:29:43] 2025-10-11 05:29:13,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 01:29:43] 2025-10-11 05:29:37,279 | INFO     | [monitor] cgroup control has ended
[2025-10-11 01:29:43] 2025-10-11 05:29:38,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607118329664)>', '<ExcThread(monitor, started 140606651213568)>']
[2025-10-11 01:29:43] 2025-10-11 05:29:39,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 01:29:43] 2025-10-11 05:29:39,394 | INFO     | [monitor] control thread has ended
[2025-10-11 01:29:43] 2025-10-11 05:29:43,450 | INFO     | all workflow threads have been joined
[2025-10-11 01:29:43] 2025-10-11 05:29:43,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 01:29:43] 2025-10-11 05:29:43,451 | INFO     | traces error code: 0
[2025-10-11 01:29:43] 2025-10-11 05:29:43,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 01:29:43] 2025-10-11 05:29:43,539 [wrapper] ==== pilot stdout END ====
[2025-10-11 01:29:43] 2025-10-11 05:29:43,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 01:29:43] 2025-10-11 05:29:43,545 [wrapper] pilotpid: 2070114
[2025-10-11 01:29:43] 2025-10-11 05:29:43,547 [wrapper] Pilot exit status: 0
[2025-10-11 01:29:43] 2025-10-11 05:29:43,559 [wrapper] pandaids: 6837705129
[2025-10-11 01:29:43] 2025-10-11 05:29:43,601 [wrapper] cleanup supervisor_pilot 2103754 2070116
[2025-10-11 01:29:43] 2025-10-11 05:29:43,604 [wrapper] Test setup, not cleaning
[2025-10-11 01:29:43] 2025-10-11 05:29:43,608 [wrapper] apfmon messages muted
[2025-10-11 01:29:43] 2025-10-11 05:29:43,610 [wrapper] ==== wrapper stdout END ====
[2025-10-11 01:29:43] 2025-10-11 05:29:43,613 [wrapper] ==== wrapper stderr END ====
[2025-10-11 01:29:43]  *** Error codes and diagnostics ***
[2025-10-11 01:29:43]     "exeErrorCode": 0,
[2025-10-11 01:29:43]     "exeErrorDiag": "",
[2025-10-11 01:29:43]     "pilotErrorCode": 0,
[2025-10-11 01:29:43]     "pilotErrorDiag": "",
[2025-10-11 01:29:43]  *** Listing of results directory ***
[2025-10-11 01:29:43] total 410024
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc    557409 Oct 10 13:01 pilot3.tar.gz
[2025-10-11 01:29:43] -rwx------ 1 boinc boinc     36292 Oct 10 13:12 runpilot2-wrapper.sh
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:12 queuedata.json
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc       100 Oct 11 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 01:29:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 00:47 run_atlas
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc       105 Oct 11 00:47 job.xml
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc      7601 Oct 11 00:47 init_data.xml
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc 222982699 Oct 11 00:47 EVNT.46676267._001712.pool.root.1
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc     15120 Oct 11 00:47 start_atlas.sh
[2025-10-11 01:29:43] drwxrwx--x 2 boinc boinc      4096 Oct 11 00:47 shared
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc    569679 Oct 11 00:47 input.tar.gz
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc         0 Oct 11 00:47 boinc_lockfile
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc      2549 Oct 11 00:47 pandaJob.out
[2025-10-11 01:29:43] -rw------- 1 boinc boinc    975517 Oct 11 00:47 agis_schedconf.cvmfs.json
[2025-10-11 01:29:43] -rw------- 1 boinc boinc   1560580 Oct 11 00:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 01:29:43] drwx------ 5 boinc boinc      4096 Oct 11 00:47 pilot3
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc       529 Oct 11 01:28 boinc_task_state.xml
[2025-10-11 01:29:43] -rw------- 1 boinc boinc 191455556 Oct 11 01:28 HITS.46676269._042276.pool.root.1
[2025-10-11 01:29:43] -rw------- 1 boinc boinc      1029 Oct 11 01:28 memory_monitor_summary.json
[2025-10-11 01:29:43] -rw------- 1 boinc boinc    361638 Oct 11 01:28 log.46676269._042276.job.log.tgz.1
[2025-10-11 01:29:43] -rw------- 1 boinc boinc      7784 Oct 11 01:28 heartbeat.json
[2025-10-11 01:29:43] -rw------- 1 boinc boinc        95 Oct 11 01:29 pilot_heartbeat.json
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc      8192 Oct 11 01:29 boinc_mmap_file
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc        27 Oct 11 01:29 wrapper_checkpoint.txt
[2025-10-11 01:29:43] -rw------- 1 boinc boinc      5089 Oct 11 01:29 pilotlog.txt
[2025-10-11 01:29:43] -rw------- 1 boinc boinc    394697 Oct 11 01:29 log.46676269._042276.job.log.1
[2025-10-11 01:29:43] -rw------- 1 boinc boinc       357 Oct 11 01:29 output.list
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc       620 Oct 11 01:29 runtime_log
[2025-10-11 01:29:43] -rw------- 1 boinc boinc    778240 Oct 11 01:29 result.tar.gz
[2025-10-11 01:29:43] -rw------- 1 boinc boinc       649 Oct 11 01:29 yHwNDmwqVR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHydNDmo27zQm.diag
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc      8772 Oct 11 01:29 runtime_log.err
[2025-10-11 01:29:43] -rw-r--r-- 1 boinc boinc     21676 Oct 11 01:29 stderr.txt
[2025-10-11 01:29:43] HITS file was successfully produced:
[2025-10-11 01:29:43] -rw------- 1 boinc boinc 191455556 Oct 11 01:28 shared/HITS.pool.root.1
[2025-10-11 01:29:43]  *** Contents of shared directory: ***
[2025-10-11 01:29:43] total 406076
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc 222982699 Oct 11 00:47 ATLAS.root_0
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc     15120 Oct 11 00:47 start_atlas.sh
[2025-10-11 01:29:43] -rw-r--r-- 2 boinc boinc    569679 Oct 11 00:47 input.tar.gz
[2025-10-11 01:29:43] -rw------- 1 boinc boinc 191455556 Oct 11 01:28 HITS.pool.root.1
[2025-10-11 01:29:43] -rw------- 1 boinc boinc    778240 Oct 11 01:29 result.tar.gz
01:29:45 (2061432): run_atlas exited; CPU time 24291.875118
01:29:45 (2061432): called boinc_finish(0)

</stderr_txt>
]]>

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