Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:51:31 (743801): wrapper (7.7.26015): starting
09:51:31 (743801): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 09:51:31] Arguments: --nthreads 4
[2025-10-12 09:51:31] Threads: 4
[2025-10-12 09:51:31] Checking for CVMFS
[2025-10-12 09:51:31] No cvmfs_config command found, will try listing directly
[2025-10-12 09:51:31] CVMFS is ok
[2025-10-12 09:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:51:31] Further information can be found at the LHC@home message board.
[2025-10-12 09:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:51:31] Checking for apptainer binary...
[2025-10-12 09:51:31] which: no apptainer in ((null))
[2025-10-12 09:51:31] apptainer is not installed, using version from CVMFS
[2025-10-12 09:51:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:51:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-10-12 09:51:31] apptainer works
[2025-10-12 09:51:31] Set ATHENA_PROC_NUMBER=4
[2025-10-12 09:51:31] Set ATHENA_CORE_NUMBER=4
[2025-10-12 09:51:31] Starting ATLAS job with PandaID=6837874731
[2025-10-12 09:51:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:54:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:54:40] 2025-10-12 10:44:14,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,618 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 12:54:40] 2025-10-12 10:44:14,621 | INFO     | time since job start (10352s) is within the limit (172800.0s)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,628 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2782.8272968750016
[2025-10-12 12:54:40] 2025-10-12 10:44:14,640 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6837874731/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,641 | INFO     | extracted standard info from prmon json
[2025-10-12 12:54:40] 2025-10-12 10:44:14,641 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:54:40] 2025-10-12 10:44:14,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:54:40] 2025-10-12 10:44:14,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:54:40] 2025-10-12 10:44:14,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:54:40] 2025-10-12 10:44:14,646 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:54:40] 2025-10-12 10:44:14,646 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,647 | INFO     | sum of deviations: 16059202698.000004
[2025-10-12 12:54:40] 2025-10-12 10:44:14,647 | INFO     | mean x: 1760260654.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,647 | INFO     | mean y: 2320763.3136094674
[2025-10-12 12:54:40] 2025-10-12 10:44:14,647 | INFO     | -- intersect: -18885316330.99308
[2025-10-12 12:54:40] 2025-10-12 10:44:14,648 | INFO     | intersect: -18885316330.99308
[2025-10-12 12:54:40] 2025-10-12 10:44:14,648 | INFO     | chi2: 1.3819662332201599
[2025-10-12 12:54:40] 2025-10-12 10:44:14,648 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,649 | INFO     | sum of deviations: 15570343177.500004
[2025-10-12 12:54:40] 2025-10-12 10:44:14,649 | INFO     | mean x: 1760260501.5
[2025-10-12 12:54:40] 2025-10-12 10:44:14,649 | INFO     | mean y: 2320185.0548780486
[2025-10-12 12:54:40] 2025-10-12 10:44:14,649 | INFO     | -- intersect: -20036922647.90859
[2025-10-12 12:54:40] 2025-10-12 10:44:14,650 | INFO     | intersect: -20036922647.90859
[2025-10-12 12:54:40] 2025-10-12 10:44:14,650 | INFO     | chi2: 1.3832101191867272
[2025-10-12 12:54:40] 2025-10-12 10:44:14,650 | INFO     | current chi2=1.3832101191867272 (change=-0.09000841964632604 %)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,650 | INFO     | right removable region: 163
[2025-10-12 12:54:40] 2025-10-12 10:44:14,650 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,651 | INFO     | sum of deviations: -5976945920.000002
[2025-10-12 12:54:40] 2025-10-12 10:44:14,651 | INFO     | mean x: 1760260806.5
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | mean y: 2346437.5975609757
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | -- intersect: 7694758228.275099
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | intersect: 7694758228.275099
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | chi2: 0.033009250459282914
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | current chi2=0.033009250459282914 (change=97.61142858155317 %)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,652 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,653 | INFO     | sum of deviations: -4881910398.000001
[2025-10-12 12:54:40] 2025-10-12 10:44:14,653 | INFO     | mean x: 1760260959.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,653 | INFO     | mean y: 2345035.955974843
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | -- intersect: 6897027081.314656
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | intersect: 6897027081.314656
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | chi2: 0.029597711264273983
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | current chi2=0.029597711264273983 (change=10.335100456816136 %)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | left removable region: 20
[2025-10-12 12:54:40] 2025-10-12 10:44:14,654 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,655 | INFO     | sum of deviations: 372828828.00000006
[2025-10-12 12:54:40] 2025-10-12 10:44:14,655 | INFO     | mean x: 1760261081.0
[2025-10-12 12:54:40] 2025-10-12 10:44:14,655 | INFO     | mean y: 2337586.27972028
[2025-10-12 12:54:40] 2025-10-12 10:44:14,655 | INFO     | -- intersect: -721466906.7189162
[2025-10-12 12:54:40] 2025-10-12 10:44:14,656 | INFO     | intersect: -721466906.7189162
[2025-10-12 12:54:40] 2025-10-12 10:44:14,656 | INFO     | chi2: 0.010061750801170319
[2025-10-12 12:54:40] 2025-10-12 10:44:14,656 | INFO     | -- intersect: -721466906.7189162
[2025-10-12 12:54:40] 2025-10-12 10:44:14,656 | INFO     | current memory leak: 0.41 B/s (using 143 data points, chi2=0.01)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | could have reported an average CPU frequency of 2632 MHz (9 samples)
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | ..............................
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . Timing measurements:
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . get job = 0 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . initial setup = 1 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . payload setup = 6 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . stage-in = 0 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . payload execution = 10314 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . stage-out = 0 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,657 | INFO     | . log creation = 0 s
[2025-10-12 12:54:40] 2025-10-12 10:44:14,658 | INFO     | ..............................
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | 
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | job summary report
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | --------------------------------------------------
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | PanDA job id: 6837874731
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | task id: 46676269
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | errors: (none)
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | pilot state: finished 
[2025-10-12 12:54:40] 2025-10-12 10:44:15,243 | INFO     | transexitcode: 0
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | exeerrorcode: 0
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | exeerrordiag: 
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | exitcode: 0
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | exitmsg: OK
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | cpuconsumptiontime: 39548 s
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | nevents: 400
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | neventsw: 0
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | pid: 780073
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | pgrp: 780073
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | corecount: 4
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | event service: False
[2025-10-12 12:54:40] 2025-10-12 10:44:15,244 | INFO     | sizes: {0: 2348868, 5: 2349130, 11: 2349186, 10324: 2377963, 10325: 2386983, 10328: 2387039, 10337: 2387425}
[2025-10-12 12:54:40] 2025-10-12 10:44:15,245 | INFO     | --------------------------------------------------
[2025-10-12 12:54:40] 2025-10-12 10:44:15,245 | INFO     | 
[2025-10-12 12:54:40] 2025-10-12 10:44:15,245 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-10-12 12:54:40] 2025-10-12 10:44:15,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:54:40] 2025-10-12 10:44:15,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:54:40] 2025-10-12 10:44:15,269 | INFO     | job 6837874731 has completed (purged errors)
[2025-10-12 12:54:40] 2025-10-12 10:44:15,269 | INFO     | overall cleanup function is called
[2025-10-12 12:54:40] 2025-10-12 10:44:16,277 | INFO     | --- collectZombieJob: --- 10, [780073]
[2025-10-12 12:54:40] 2025-10-12 10:44:16,277 | INFO     | zombie collector waiting for pid 780073
[2025-10-12 12:54:40] 2025-10-12 10:44:16,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:54:40] 2025-10-12 10:44:16,278 | INFO     | collected zombie processes
[2025-10-12 12:54:40] 2025-10-12 10:44:16,278 | INFO     | will attempt to kill all subprocesses of pid=780073
[2025-10-12 12:54:40] 2025-10-12 10:44:16,664 | INFO     | process IDs to be killed: [780073] (in reverse order)
[2025-10-12 12:54:40] 2025-10-12 10:44:16,773 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:54:40] 2025-10-12 10:44:16,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:54:40] 2025-10-12 10:44:16,786 | INFO     | did not find any defunct processes belonging to 780073
[2025-10-12 12:54:40] 2025-10-12 10:44:16,798 | INFO     | did not find any defunct processes belonging to 780073
[2025-10-12 12:54:40] 2025-10-12 10:44:16,798 | INFO     | ready for new job
[2025-10-12 12:54:40] 2025-10-12 10:44:16,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:54:40] 2025-10-12 10:44:16,801 | INFO     | ***************************************
[2025-10-12 12:54:40] 2025-10-12 10:44:16,801 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:54:40] 2025-10-12 10:44:16,801 | INFO     | ***************************************
[2025-10-12 12:54:40] 2025-10-12 10:44:16,801 | INFO     | 
[2025-10-12 12:54:40] 2025-10-12 10:44:16,805 | INFO     | architecture information:
[2025-10-12 12:54:40] 2025-10-12 10:44:16,806 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:54:40] 2025-10-12 10:44:16,822 | INFO     | cat /etc/os-release:
[2025-10-12 12:54:40] NAME="CentOS Linux"
[2025-10-12 12:54:40] VERSION="7 (Core)"
[2025-10-12 12:54:40] ID="centos"
[2025-10-12 12:54:40] ID_LIKE="rhel fedora"
[2025-10-12 12:54:40] VERSION_ID="7"
[2025-10-12 12:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:54:40] ANSI_COLOR="0;31"
[2025-10-12 12:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:54:40] HOME_URL="https://www.centos.org/"
[2025-10-12 12:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:54:40] 
[2025-10-12 12:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:54:40] 
[2025-10-12 12:54:40] 2025-10-12 10:44:16,823 | INFO     | ***************************************
[2025-10-12 12:54:40] 2025-10-12 10:44:17,324 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-10-12 12:54:40] 2025-10-12 10:44:17,342 | INFO     | sufficient remaining disk space (691874562048 B)
[2025-10-12 12:54:40] 2025-10-12 10:44:17,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:54:40] 2025-10-12 10:44:17,342 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:54:40] 2025-10-12 10:44:17,342 | INFO     | update_server=False
[2025-10-12 12:54:40] 2025-10-12 10:44:17,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:54:40] 2025-10-12 10:44:17,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:54:40] 2025-10-12 10:44:17,668 | INFO     | all job control threads have been joined
[2025-10-12 12:54:40] 2025-10-12 10:44:17,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:40] 2025-10-12 10:44:17,722 | INFO     | aborting loop
[2025-10-12 12:54:40] 2025-10-12 10:44:17,987 | INFO     | all data control threads have been joined
[2025-10-12 12:54:40] 2025-10-12 10:44:18,348 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:54:40] 2025-10-12 10:44:18,411 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,472 | INFO     | all payload control threads have been joined
[2025-10-12 12:54:40] 2025-10-12 10:44:18,486 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,674 | INFO     | [job] control thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,727 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,918 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:18,993 | INFO     | [data] control thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,309 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,473 | INFO     | [payload] control thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,489 | INFO     | [job] validate thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,541 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:19,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:40] 2025-10-12 10:44:20,371 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:20,773 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:21,349 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:28,048 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:54:40] 2025-10-12 10:44:29,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:54:40] 2025-10-12 10:44:48,131 | INFO     | PID=752849 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:54:40] 2025-10-12 10:44:48,131 | INFO     | .. there are 6 such processes running
[2025-10-12 12:54:40] 2025-10-12 10:44:48,132 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:54:40] 2025-10-12 10:44:48,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:54:40] 2025-10-12 10:44:48,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:54:40] 2025-10-12 10:44:58,240 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:54:40] 2025-10-12 10:44:59,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22607969109824)>', '<ExcThread(monitor, started 22607728436992)>']
[2025-10-12 12:54:40] 2025-10-12 10:45:00,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:54:40] 2025-10-12 10:45:00,191 | INFO     | [monitor] control thread has ended
[2025-10-12 12:54:40] 2025-10-12 10:45:04,619 | INFO     | all workflow threads have been joined
[2025-10-12 12:54:40] 2025-10-12 10:45:04,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:54:40] 2025-10-12 10:45:04,620 | INFO     | traces error code: 0
[2025-10-12 12:54:40] 2025-10-12 10:45:04,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:54:40] 2025-10-12 10:45:04,802 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:54:40] 2025-10-12 10:45:04,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:54:40] 2025-10-12 10:45:04,809 [wrapper] pilotpid: 752849
[2025-10-12 12:54:40] 2025-10-12 10:45:04,812 [wrapper] Pilot exit status: 0
[2025-10-12 12:54:40] 2025-10-12 10:45:04,822 [wrapper] pandaids: 6837874731
[2025-10-12 12:54:40] 2025-10-12 10:45:04,898 [wrapper] cleanup supervisor_pilot  991199 752850
[2025-10-12 12:54:40] 2025-10-12 10:45:04,901 [wrapper] Test setup, not cleaning
[2025-10-12 12:54:40] 2025-10-12 10:45:04,905 [wrapper] apfmon messages muted
[2025-10-12 12:54:40] 2025-10-12 10:45:04,908 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:54:40] 2025-10-12 10:45:04,911 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:54:40]  *** Error codes and diagnostics ***
[2025-10-12 12:54:40]     "exeErrorCode": 0,
[2025-10-12 12:54:40]     "exeErrorDiag": "",
[2025-10-12 12:54:40]     "pilotErrorCode": 0,
[2025-10-12 12:54:40]     "pilotErrorDiag": "",
[2025-10-12 12:54:40]  *** Listing of results directory ***
[2025-10-12 12:54:40] total 412232
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc    557409 Oct 11 00:56 pilot3.tar.gz
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc      5112 Oct 11 01:15 queuedata.json
[2025-10-12 12:54:40] -rwx------ 1 boinc boinc     36292 Oct 11 01:15 runpilot2-wrapper.sh
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:54:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:51 run_atlas
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:51 job.xml
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc      6635 Oct 12 09:51 init_data.xml
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc 220566259 Oct 12 09:51 EVNT.46676267._001895.pool.root.1
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:51 start_atlas.sh
[2025-10-12 12:54:40] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:51 shared
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc    569683 Oct 12 09:51 input.tar.gz
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:51 boinc_lockfile
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc      2550 Oct 12 09:51 pandaJob.out
[2025-10-12 12:54:40] -rw------- 1 boinc boinc    975520 Oct 12 09:51 agis_schedconf.cvmfs.json
[2025-10-12 12:54:40] -rw------- 1 boinc boinc   1560580 Oct 12 09:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:54:40] drwx------ 5 boinc boinc      4096 Oct 12 09:51 pilot3
[2025-10-12 12:54:40] -rw------- 1 boinc boinc 193999948 Oct 12 12:43 HITS.46676269._046930.pool.root.1
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc       528 Oct 12 12:43 boinc_task_state.xml
[2025-10-12 12:54:40] -rw------- 1 boinc boinc      1038 Oct 12 12:43 memory_monitor_summary.json
[2025-10-12 12:54:40] -rw------- 1 boinc boinc    356320 Oct 12 12:44 log.46676269._046930.job.log.tgz.1
[2025-10-12 12:54:40] -rw------- 1 boinc boinc      7834 Oct 12 12:44 heartbeat.json
[2025-10-12 12:54:40] -rw------- 1 boinc boinc        95 Oct 12 12:44 pilot_heartbeat.json
[2025-10-12 12:54:40] -rw------- 1 boinc boinc      4904 Oct 12 12:45 pilotlog.txt
[2025-10-12 12:54:40] -rw------- 1 boinc boinc   1471487 Oct 12 12:45 log.46676269._046930.job.log.1
[2025-10-12 12:54:40] -rw------- 1 boinc boinc       357 Oct 12 12:45 output.list
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:45 runtime_log
[2025-10-12 12:54:40] -rw------- 1 boinc boinc   1843200 Oct 12 12:45 result.tar.gz
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc      9070 Oct 12 12:45 runtime_log.err
[2025-10-12 12:54:40] -rw------- 1 boinc boinc       664 Oct 12 12:45 OpHODmBWbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJheNDmlT8awn.diag
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:54 wrapper_checkpoint.txt
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:54 boinc_mmap_file
[2025-10-12 12:54:40] -rw-r--r-- 1 boinc boinc     20894 Oct 12 12:54 stderr.txt
[2025-10-12 12:54:40] HITS file was successfully produced:
[2025-10-12 12:54:40] -rw------- 1 boinc boinc 193999948 Oct 12 12:43 shared/HITS.pool.root.1
[2025-10-12 12:54:40]  *** Contents of shared directory: ***
[2025-10-12 12:54:40] total 407240
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc 220566259 Oct 12 09:51 ATLAS.root_0
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:51 start_atlas.sh
[2025-10-12 12:54:40] -rw-r--r-- 2 boinc boinc    569683 Oct 12 09:51 input.tar.gz
[2025-10-12 12:54:40] -rw------- 1 boinc boinc 193999948 Oct 12 12:43 HITS.pool.root.1
[2025-10-12 12:54:40] -rw------- 1 boinc boinc   1843200 Oct 12 12:45 result.tar.gz
12:54:42 (743801): run_atlas exited; CPU time 39965.690094
12:54:42 (743801): called boinc_finish(0)

</stderr_txt>
]]>

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